Skip to content

modelsum(): catch the error #365

Description

@kekec3778

A short reprex:

a <- factor(c(rep("a", 5), rep("b", 5)), levels = c("a", "b"))
b <- factor(c(rep(NA_character_, 10)), levels = c("a", "b"))
c <- factor(c(sample(x = c("x", "y", "z"), size = 10, replace = TRUE)), levels = c("x", "y", "z"))
df <- tibble(a, b, c)

mod1 <- glm(formula = a ~ c, data = df, family = "binomial")  # works fine
mod2 <- glm(formula = a ~ b, data = df, family = "binomial") # error

Now, try to get this results with modelsum():

tab.mod <-
  arsenal::modelsum(
    formula = a ~ b + c,
    data = df, 
    family = "binomial",  
    adjust = ~ 1,   
    control = modelsum.control(
      show.intercept = FALSE,
      binomial.stats = c("OR", "CI.lower.OR", "CI.upper.OR", "p.value", "Nmiss")
    )
  )

Of course it fails, because a ~ b.
Is it possible to catch such errors and anyway show the results with default values for example "NA" or similar ?

Metadata

Metadata

Assignees

No one assigned

    Labels

    No labels
    No labels

    Type

    No type

    Projects

    No projects

    Milestone

    No milestone

    Relationships

    None yet

    Development

    No branches or pull requests

    Issue actions