Update organization name from projectmesa to mesa (#192)

EwoutH · adamamer20 · web-flow · commit ccd9f9e08c2d · 2025-12-11T11:44:20.000+01:00
Co-authored-by: Adam Amer &lt;136176500+adamamer20@users.noreply.github.com&gt;
diff --git a/.github/ISSUE_TEMPLATE/config.yml b/.github/ISSUE_TEMPLATE/config.yml
@@ -1,7 +1,7 @@
 blank_issues_enabled: true
 contact_links:
   - name: Discussions/Questions etc
-    url: https://github.com/projectmesa/mesa-frames/discussions
+    url: https://github.com/mesa/mesa-frames/discussions
     about: Discuss Mesa-Frames, ask questions, do discussions, share ideas, and showcase your projects
 
 
diff --git a/.github/workflows/sync_coderabbit.yml b/.github/workflows/sync_coderabbit.yml
@@ -19,7 +19,7 @@ jobs:
       pull-requests: write   # open PR & enable auto‑merge
 
     env:
-      UPSTREAM_RAW_URL: "https://raw.githubusercontent.com/projectmesa/mesa/main/.coderabbit.yaml"
+      UPSTREAM_RAW_URL: "https://raw.githubusercontent.com/mesa/mesa/main/.coderabbit.yaml"
       SYNC_BRANCH: "sync-coderabbit-from-mesa"
 
     steps:
@@ -51,11 +51,11 @@ jobs:
         with:
           token: ${{ secrets.GITHUB_TOKEN }}
           branch: ${{ env.SYNC_BRANCH }}
-          commit-message: "chore: sync .coderabbit.yaml from projectmesa/mesa@main"
+          commit-message: "chore: sync .coderabbit.yaml from mesa/mesa@main"
           title: "🔄 Sync .coderabbit.yaml from mesa:main"
           body: |
             Automated update of **.coderabbit.yaml** from \
-            [projectmesa/mesa:main](${{ env.UPSTREAM_RAW_URL }}).
+            [mesa/mesa:main](${{ env.UPSTREAM_RAW_URL }}).
 
             This PR will merge automatically once all required checks succeed.
           labels: automated, coderabbit-sync
diff --git a/CONTRIBUTING.md b/CONTRIBUTING.md
@@ -2,11 +2,11 @@
 
 Thank you for taking the time to contribute to **mesa-frames**! Since the project is still in its early stages, we warmly welcome contributions that will help shape its development. 🎉
 
-For a more general and comprehensive guide, please refer to [mesa's main contribution guidelines](https://github.com/projectmesa/mesa/blob/main/CONTRIBUTING.md). 📜
+For a more general and comprehensive guide, please refer to [mesa's main contribution guidelines](https://github.com/mesa/mesa/blob/main/CONTRIBUTING.md). 📜
 
 ## Project Roadmap 🗺️
 
-Before contributing, we recommend reviewing our [roadmap](https://projectmesa.github.io/mesa-frames/roadmap/) file to understand the project's current priorities, upcoming features, and long-term vision. This will help ensure your contributions align with the project's direction.
+Before contributing, we recommend reviewing our [roadmap](https://mesa.github.io/mesa-frames/roadmap/) file to understand the project's current priorities, upcoming features, and long-term vision. This will help ensure your contributions align with the project's direction.
 
 ## How to Contribute 💡
 
@@ -125,7 +125,7 @@ It is recommended to set up a virtual environment before installing dependencies
 
       No manual setup needed in these environments!
 
-  For more details on runtime type checking, see the [Development Guidelines](https://projectmesa.github.io/mesa-frames/development/).
+  For more details on runtime type checking, see the [Development Guidelines](https://mesa.github.io/mesa-frames/development/).
 
 #### **Step 6: Documentation Updates (If Needed)** 📖
 
diff --git a/README.md b/README.md
@@ -1,6 +1,6 @@
 # mesa-frames 🚀
 
-mesa-frames is an extension of the [mesa](https://github.com/projectmesa/mesa) framework, designed for complex simulations with thousands of agents. By storing agents in a DataFrame, mesa-frames significantly enhances the performance and scalability of mesa, while maintaining a similar syntax. mesa-frames allows for the use of [vectorized functions](https://stackoverflow.com/a/1422198) which significantly speeds up operations whenever simultaneous activation of agents is possible.
+mesa-frames is an extension of the [mesa](https://github.com/mesa/mesa) framework, designed for complex simulations with thousands of agents. By storing agents in a DataFrame, mesa-frames significantly enhances the performance and scalability of mesa, while maintaining a similar syntax. mesa-frames allows for the use of [vectorized functions](https://stackoverflow.com/a/1422198) which significantly speeds up operations whenever simultaneous activation of agents is possible.
 
 ## Why DataFrames? 📊
 
@@ -10,11 +10,11 @@ DataFrames are optimized for simultaneous operations through [SIMD processing](h
 
 The following is a performance graph showing execution time using mesa and mesa-frames for the [Boltzmann Wealth model](https://mesa.readthedocs.io/en/stable/tutorials/intro_tutorial.html).
 
-![Performance Graph with Mesa](https://github.com/projectmesa/mesa-frames/blob/main/examples/boltzmann_wealth/boltzmann_with_mesa.png)
+![Performance Graph with Mesa](https://github.com/mesa/mesa-frames/blob/main/examples/boltzmann_wealth/boltzmann_with_mesa.png)
 
-![Performance Graph without Mesa](https://github.com/projectmesa/mesa-frames/blob/main/examples/boltzmann_wealth/boltzmann_no_mesa.png)
+![Performance Graph without Mesa](https://github.com/mesa/mesa-frames/blob/main/examples/boltzmann_wealth/boltzmann_no_mesa.png)
 
-([You can check the script used to generate the graph here](https://github.com/projectmesa/mesa-frames/blob/main/examples/boltzmann_wealth/performance_plot.py), but if you want to additionally compare vs Mesa, you have to uncomment `mesa_implementation` and its label)
+([You can check the script used to generate the graph here](https://github.com/mesa/mesa-frames/blob/main/examples/boltzmann_wealth/performance_plot.py), but if you want to additionally compare vs Mesa, you have to uncomment `mesa_implementation` and its label)
 
 ## Installation
 
@@ -33,7 +33,7 @@ To install the most updated version of mesa-frames, you can clone the repository
 To get started with mesa-frames, first clone the repository from GitHub:
 
 ```bash
-git clone https://github.com/projectmesa/mesa-frames.git
+git clone https://github.com/mesa/mesa-frames.git
 cd mesa_frames
 ```
 
@@ -80,11 +80,11 @@ pip install -e .
 
 ## Usage
 
-[![Open In Colab](https://colab.research.google.com/assets/colab-badge.svg)](https://colab.research.google.com/github/projectmesa/mesa-frames/blob/main/docs/general/user-guide/2_introductory-tutorial.ipynb)
+[![Open In Colab](https://colab.research.google.com/assets/colab-badge.svg)](https://colab.research.google.com/github/mesa/mesa-frames/blob/main/docs/general/user-guide/2_introductory-tutorial.ipynb)
 
 **Note:** mesa-frames is currently in its early stages of development. As such, the usage patterns and API are subject to change. Breaking changes may be introduced. Reports of feedback and issues are encouraged.
 
-[You can find the API documentation here](https://projectmesa.github.io/mesa-frames/api).
+[You can find the API documentation here](https://mesa.github.io/mesa-frames/api).
 
 ### Creation of an Agent
 
@@ -170,4 +170,4 @@ WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
 See the License for the specific language governing permissions and
 limitations under the License.
 
-For the full license text, see the [LICENSE](https://github.com/projectmesa/mesa-frames/blob/main/LICENSE) file in the GitHub repository.
+For the full license text, see the [LICENSE](https://github.com/mesa/mesa-frames/blob/main/LICENSE) file in the GitHub repository.
diff --git a/ROADMAP.md b/ROADMAP.md
@@ -9,7 +9,7 @@ This document outlines the development roadmap for the mesa-frames project. It p
 One of our major priorities was to move from pandas to polars as the primary dataframe backend. This transition was motivated by performance considerations.
 Now we should transition to using the lazily evaluated version of polars.
 
-**Related issues:** [#10: GPU integration: Dask, cuda (cudf) and RAPIDS (Polars)](https://github.com/projectmesa/mesa-frames/issues/10), [#89: Investigate using Ibis for the common interface library to any DF backend](https://github.com/projectmesa/mesa-frames/issues/89), [#52: Use of LazyFrames for Polars implementation](https://github.com/projectmesa/mesa-frames/issues/52)
+**Related issues:** [#10: GPU integration: Dask, cuda (cudf) and RAPIDS (Polars)](https://github.com/mesa/mesa-frames/issues/10), [#89: Investigate using Ibis for the common interface library to any DF backend](https://github.com/mesa/mesa-frames/issues/89), [#52: Use of LazyFrames for Polars implementation](https://github.com/mesa/mesa-frames/issues/52)
 
 #### Progress and Next Steps
 
@@ -20,7 +20,7 @@ Now we should transition to using the lazily evaluated version of polars.
 
 A critical aspect of agent-based models is efficiently managing concurrent agent movements, especially when multiple agents attempt to move to the same location simultaneously. We aim to implement abstractions that handle these concurrency conditions automatically.
 
-**Related issues:** [#108: Adding abstraction of optimal agent movement](https://github.com/projectmesa/mesa-frames/issues/108), [#48: Emulate RandomActivation with DataFrame.rolling](https://github.com/projectmesa/mesa-frames/issues/48)
+**Related issues:** [#108: Adding abstraction of optimal agent movement](https://github.com/mesa/mesa-frames/issues/108), [#48: Emulate RandomActivation with DataFrame.rolling](https://github.com/mesa/mesa-frames/issues/48)
 
 #### Sugarscape Example of Concurrency Issues
 
diff --git a/docs/api/conf.py b/docs/api/conf.py
@@ -57,8 +57,8 @@
 autodoc_default_options = {"special-members": True, "exclude-members": "__weakref__"}
 
 # -- GitHub link and user guide settings -------------------------------------
-github_root = "https://github.com/projectmesa/mesa-frames"
-web_root = "https://projectmesa.github.io/mesa-frames"
+github_root = "https://github.com/mesa/mesa-frames"
+web_root = "https://mesa.github.io/mesa-frames"
 
 html_theme_options = {
     "external_links": [
diff --git a/docs/general/index.md b/docs/general/index.md
@@ -1,6 +1,6 @@
 # Welcome to mesa-frames 🚀
 
-mesa-frames is an extension of the [mesa](https://github.com/projectmesa/mesa) framework, designed for complex simulations with thousands of agents. By storing agents in a DataFrame, mesa-frames significantly enhances the performance and scalability of mesa, while maintaining a similar syntax.
+mesa-frames is an extension of the [mesa](https://github.com/mesa/mesa) framework, designed for complex simulations with thousands of agents. By storing agents in a DataFrame, mesa-frames significantly enhances the performance and scalability of mesa, while maintaining a similar syntax.
 
 You can get a model which is multiple orders of magnitude faster based on the number of agents - the more agents, the faster the relative performance.
 
@@ -14,9 +14,9 @@ DataFrames are optimized for simultaneous operations through [SIMD processing](h
 
 Check out our performance graphs comparing mesa and mesa-frames for the [Boltzmann Wealth model](https://mesa.readthedocs.io/en/stable/tutorials/intro_tutorial.html):
 
-![Performance Graph with Mesa](https://github.com/projectmesa/mesa-frames/raw/main/examples/boltzmann_wealth/boltzmann_with_mesa.png)
+![Performance Graph with Mesa](https://github.com/mesa/mesa-frames/raw/main/examples/boltzmann_wealth/boltzmann_with_mesa.png)
 
-![Performance Graph without Mesa](https://github.com/projectmesa/mesa-frames/raw/main/examples/boltzmann_wealth/boltzmann_no_mesa.png)
+![Performance Graph without Mesa](https://github.com/mesa/mesa-frames/raw/main/examples/boltzmann_wealth/boltzmann_no_mesa.png)
 
 ## Quick Start 🚀
 
@@ -31,7 +31,7 @@ pip install mesa-frames
 #### Installing from Source
 
 ```bash
-git clone https://github.com/projectmesa/mesa-frames.git
+git clone https://github.com/mesa/mesa-frames.git
 cd mesa_frames
 pip install -e .
 ```
@@ -82,8 +82,8 @@ class MoneyModel(Model):
 
 ## Get Involved! 🤝
 
-mesa-frames is in its early stages, and we welcome your feedback and contributions! Check out our [GitHub repository](https://github.com/projectmesa/mesa-frames) to get started.
+mesa-frames is in its early stages, and we welcome your feedback and contributions! Check out our [GitHub repository](https://github.com/mesa/mesa-frames) to get started.
 
 ## License
 
-mesa-frames is available under the MIT License. See the [LICENSE](https://github.com/projectmesa/mesa-frames/blob/main/LICENSE) file for full details.
+mesa-frames is available under the MIT License. See the [LICENSE](https://github.com/mesa/mesa-frames/blob/main/LICENSE) file for full details.
diff --git a/docs/general/user-guide/2_introductory-tutorial.ipynb b/docs/general/user-guide/2_introductory-tutorial.ipynb
@@ -5,7 +5,7 @@
    "id": "7ee055b2",
    "metadata": {},
    "source": [
-    "[![Open In Colab](https://colab.research.google.com/assets/colab-badge.svg)](https://colab.research.google.com/github/projectmesa/mesa-frames/blob/main/docs/general/user-guide/2_introductory-tutorial.ipynb)"
+    "[![Open In Colab](https://colab.research.google.com/assets/colab-badge.svg)](https://colab.research.google.com/github/mesa/mesa-frames/blob/main/docs/general/user-guide/2_introductory-tutorial.ipynb)"
    ]
   },
   {
@@ -25,7 +25,7 @@
    "metadata": {},
    "outputs": [],
    "source": [
-    "# !pip install git+https://github.com/projectmesa/mesa-frames mesa"
+    "# !pip install git+https://github.com/mesa/mesa-frames mesa"
    ]
   },
   {
diff --git a/docs/general/user-guide/4_datacollector.ipynb b/docs/general/user-guide/4_datacollector.ipynb
@@ -7,7 +7,7 @@
    "source": [
     "# Data Collector Tutorial\n",
     "\n",
-    "[![Open In Colab](https://colab.research.google.com/assets/colab-badge.svg)](https://colab.research.google.com/github/projectmesa/mesa-frames/blob/main/docs/general/user-guide/4_datacollector.ipynb)\n",
+    "[![Open In Colab](https://colab.research.google.com/assets/colab-badge.svg)](https://colab.research.google.com/github/mesa/mesa-frames/blob/main/docs/general/user-guide/4_datacollector.ipynb)\n",
     "\n",
     "This notebook walks you through using the concrete `DataCollector` in `mesa-frames` to collect model- and agent-level data and write it to different storage backends: **memory, CSV, Parquet, S3, and PostgreSQL**.\n",
     "\n",
@@ -33,7 +33,7 @@
    },
    "outputs": [],
    "source": [
-    "# !pip install git+https://github.com/projectmesa/mesa-frames mesa"
+    "# !pip install git+https://github.com/mesa/mesa-frames mesa"
    ]
   },
   {
diff --git a/docs/general/user-guide/5_benchmarks.md b/docs/general/user-guide/5_benchmarks.md
@@ -4,18 +4,18 @@ mesa-frames offers significant performance improvements over the original mesa f
 
 ## Boltzmann Wealth Model 💰
 
-[View the benchmark script](https://github.com/projectmesa/mesa-frames/blob/main/examples/boltzmann_wealth/performance_plot.py)
+[View the benchmark script](https://github.com/mesa/mesa-frames/blob/main/examples/boltzmann_wealth/performance_plot.py)
 
 ### Comparison with mesa
 
-![Performance Graph BW](https://github.com/projectmesa/mesa-frames/raw/main/examples/boltzmann_wealth/boltzmann_no_mesa.png)
+![Performance Graph BW](https://github.com/mesa/mesa-frames/raw/main/examples/boltzmann_wealth/boltzmann_no_mesa.png)
 
 ### Comparison of mesa-frames implementations
 
-![Performance Graph BW without Mesa](https://github.com/projectmesa/mesa-frames/raw/main/examples/boltzmann_wealth/boltzmann_with_mesa.png)
+![Performance Graph BW without Mesa](https://github.com/mesa/mesa-frames/raw/main/examples/boltzmann_wealth/boltzmann_with_mesa.png)
 
 ## SugarScape with Instantaneous Growback 🍬
 
-[View the benchmark script](https://github.com/projectmesa/mesa-frames/blob/main/examples/sugarscape_ig/performance_comparison.py)
+[View the benchmark script](https://github.com/mesa/mesa-frames/blob/main/examples/sugarscape_ig/performance_comparison.py)
 
-![Performance Graph SS IG](https://github.com/projectmesa/mesa-frames/raw/main/examples/sugarscape_ig/mesa_comparison.png)
+![Performance Graph SS IG](https://github.com/mesa/mesa-frames/raw/main/examples/sugarscape_ig/mesa_comparison.png)
diff --git a/mesa_frames/__init__.py b/mesa_frames/__init__.py
@@ -38,7 +38,7 @@ def __init__(self, width, height):
 
 Developed by: Project Mesa, Adam Amer
 License: MIT
-GitHub: https://github.com/projectmesa/mesa-frames
+GitHub: https://github.com/mesa/mesa-frames
 """
 
 from __future__ import annotations
diff --git a/mesa_frames/abstract/space.py b/mesa_frames/abstract/space.py
@@ -1236,7 +1236,7 @@ class AbstractGrid(AbstractDiscreteSpace):
     The [0, 0] coordinate is at the bottom-left corner of the grid.
 
     .. _np.genfromtxt: https://numpy.org/doc/stable/reference/generated/numpy.genfromtxt.html
-    .. _mesa-examples Sugarscape model: https://github.com/projectmesa/mesa-examples/blob/e137a60e4e2f2546901bec497e79c4a7b0cc69bb/examples/sugarscape_g1mt/sugarscape_g1mt/model.py#L93-L94
+    .. _mesa-examples Sugarscape model: https://github.com/mesa/mesa-examples/blob/e137a60e4e2f2546901bec497e79c4a7b0cc69bb/examples/sugarscape_g1mt/sugarscape_g1mt/model.py#L93-L94
     """
 
     _cells_capacity: (
diff --git a/mkdocs.yml b/mkdocs.yml
@@ -1,8 +1,8 @@
 # Project information
 site_name: mesa-frames
-site_url: https://projectmesa.github.io/mesa-frames
-repo_url: https://github.com/projectmesa/mesa-frames
-repo_name: projectmesa/mesa-frames
+site_url: https://mesa.github.io/mesa-frames
+repo_url: https://github.com/mesa/mesa-frames
+repo_name: mesa/mesa-frames
 docs_dir: docs/general
 
 # Theme configuration
@@ -76,7 +76,7 @@ markdown_extensions:
   - pymdownx.keys
   - pymdownx.magiclink:
       repo_url_shorthand: true
-      user: projectmesa
+      user: mesa
       repo: mesa-frames
   - pymdownx.mark
   - pymdownx.smartsymbols
@@ -100,7 +100,7 @@ extra_javascript:
 extra:
   social:
     - icon: fontawesome/brands/github
-      link: https://github.com/projectmesa
+      link: https://github.com/mesa
     - icon: fontawesome/brands/python
       link: https://pypi.org/project/mesa-frames/
 
diff --git a/pyproject.toml b/pyproject.toml
@@ -43,8 +43,8 @@ dependencies    = [
 dynamic         = ["version"]
 
 [project.urls]
-Documentation = "https://projectmesa.github.io/mesa-frames"
-Repository    = "https://github.com/projectmesa/mesa-frames.git"
+Documentation = "https://mesa.github.io/mesa-frames"
+Repository    = "https://github.com/mesa/mesa-frames.git"
 
 
 # ──────────────────────────────────────────────────────────────────────────────

Original file line number	Diff line number	Diff line change
`@@ -5,7 +5,7 @@`
`5`	`5`	`"id": "7ee055b2",`
`6`	`6`	`"metadata": {},`
`7`	`7`	`"source": [`
`8`		`- "[![Open In Colab](https://colab.research.google.com/assets/colab-badge.svg)](https://colab.research.google.com/github/projectmesa/mesa-frames/blob/main/docs/general/user-guide/2_introductory-tutorial.ipynb)"`
	`8`	`+ "[![Open In Colab](https://colab.research.google.com/assets/colab-badge.svg)](https://colab.research.google.com/github/mesa/mesa-frames/blob/main/docs/general/user-guide/2_introductory-tutorial.ipynb)"`
`9`	`9`	`]`
`10`	`10`	`},`
`11`	`11`	`{`
`@@ -25,7 +25,7 @@`
`25`	`25`	`"metadata": {},`
`26`	`26`	`"outputs": [],`
`27`	`27`	`"source": [`
`28`		`- "# !pip install git+https://github.com/projectmesa/mesa-frames mesa"`
	`28`	`+ "# !pip install git+https://github.com/mesa/mesa-frames mesa"`
`29`	`29`	`]`
`30`	`30`	`},`
`31`	`31`	`{`