diff --git a/nanshe_ipython.ipynb b/nanshe_ipython.ipynb index ac282ac..e11435d 100644 --- a/nanshe_ipython.ipynb +++ b/nanshe_ipython.ipynb @@ -378,6 +378,10 @@ "source": [ "front = 0\n", "back = 0\n", + "top = 0\n", + "bottom = 0\n", + "left = 0\n", + "right = 0\n", "\n", "\n", "for k in [subgroup_trim]:\n", @@ -389,7 +393,7 @@ "da_imgs = dask_store[subgroup_raw]\n", "\n", "# Trim frames from front and back\n", - "da_imgs_trim = da_imgs[front:len(da_imgs)-back]\n", + "da_imgs_trim = da_imgs[front:da_imgs.shape[0]-back, top:da_imgs.shape[1]-bottom, left:da_imgs.shape[2]-right]\n", "\n", "# Store trimmed data\n", "dask_store[subgroup_trim] = da_imgs_trim\n",