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Add InterProScan to Pipeline and integrate in AMPcombi #1408

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Add InterProScan to Pipeline and integrate in AMPcombi

Add InterProScan to Pipeline and integrate in AMPcombi #1408

Triggered via pull request January 8, 2025 07:35
@Darcy220606Darcy220606
synchronize #428
add_interproscan_to_amp
Status Failure
Total duration 40m 6s
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ci.yml

on: pull_request
Choose nextflow versions to test against depending on target branch
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Choose nextflow versions to test against depending on target branch
Matrix: test
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32 errors and 25 warnings
Run pipeline with test data (latest-everything | test_prokka | docker)
Process completed with exit code 1.
Run pipeline with test data (latest-everything | test_prokka | docker)
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Run pipeline with test data (latest-everything | test_bakta | docker)
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Run pipeline with test data (latest-everything | test_bakta | docker)
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Run pipeline with test data (24.04.2 | test_prokka | docker)
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Run pipeline with test data (24.04.2 | test_bgc_pyrodigal | docker)
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Run pipeline with test data (24.04.2 | test_bgc_pyrodigal | docker)
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Run pipeline with test data (24.04.2 | test | docker)
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Run pipeline with test data (24.04.2 | test | docker)
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Run pipeline with test data (latest-everything | test | docker)
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Run pipeline with test data (latest-everything | test | docker)
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Run pipeline with test data (latest-everything | test_preannotated | docker)
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Run pipeline with test data (24.04.2 | test_preannotated_bgc | docker)
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Run pipeline with test data (24.04.2 | test_preannotated_bgc | docker)
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Run pipeline with test data (24.04.2 | test_taxonomy_bakta | docker)
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Run pipeline with test data (24.04.2 | test_taxonomy_bakta | docker)
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Run pipeline with test data (latest-everything | test_taxonomy_bakta | docker)
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Run pipeline with test data (latest-everything | test_taxonomy_bakta | docker)
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Run pipeline with test data (latest-everything | test_taxonomy_pyrodigal | docker)
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Run pipeline with test data (latest-everything | test_taxonomy_pyrodigal | docker)
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Run pipeline with test data (24.04.2 | test_taxonomy_prokka | docker)
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Run pipeline with test data (24.04.2 | test_taxonomy_prokka | docker)
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Run pipeline with test data (latest-everything | test_taxonomy_prokka | docker)
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Run pipeline with test data (latest-everything | test_taxonomy_prokka | docker)
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Run pipeline with test data (24.04.2 | test_taxonomy_pyrodigal | docker)
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Run pipeline with test data (24.04.2 | test_taxonomy_pyrodigal | docker)
Process completed with exit code 1.
Choose nextflow versions to test against depending on target branch
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
Run pipeline with test data (latest-everything | test_nothing | docker)
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
Run pipeline with test data (24.04.2 | test_nothing | docker)
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
Run pipeline with test data (latest-everything | test_prokka | docker)
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
Run pipeline with test data (latest-everything | test_bakta | docker)
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
Run pipeline with test data (24.04.2 | test_prokka | docker)
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
Run pipeline with test data (24.04.2 | test_bgc_pyrodigal | docker)
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
Run pipeline with test data (24.04.2 | test | docker)
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
Run pipeline with test data (latest-everything | test | docker)
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
Run pipeline with test data (24.04.2 | test_bakta | docker)
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
Run pipeline with test data (latest-everything | test_bgc_prokka | docker)
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
Run pipeline with test data (latest-everything | test_preannotated | docker)
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
Run pipeline with test data (24.04.2 | test_bgc_prokka | docker)
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
Run pipeline with test data (24.04.2 | test_preannotated | docker)
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
Run pipeline with test data (latest-everything | test_bgc_bakta | docker)
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
Run pipeline with test data (24.04.2 | test_preannotated_bgc | docker)
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
Run pipeline with test data (latest-everything | test_bgc_pyrodigal | docker)
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
Run pipeline with test data (24.04.2 | test_bgc_bakta | docker)
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
Run pipeline with test data (24.04.2 | test_taxonomy_bakta | docker)
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
Run pipeline with test data (latest-everything | test_taxonomy_bakta | docker)
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
Run pipeline with test data (latest-everything | test_taxonomy_pyrodigal | docker)
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
Run pipeline with test data (latest-everything | test_preannotated_bgc | docker)
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
Run pipeline with test data (24.04.2 | test_taxonomy_prokka | docker)
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
Run pipeline with test data (latest-everything | test_taxonomy_prokka | docker)
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
Run pipeline with test data (24.04.2 | test_taxonomy_pyrodigal | docker)
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636