diff --git a/conf/test_full.config b/conf/test_full.config index 356fdccc..438cb944 100644 --- a/conf/test_full.config +++ b/conf/test_full.config @@ -42,6 +42,9 @@ params { // Skip CONCOCT due to timeout issues skip_concoct = true + // Don't include unbinned contigs for downstream due to huge number, resulting in very long (and expensive) GTDB run times on AWS + exclude_unbins_from_postbinning = true + // Set Prokka compliance mode to allow metaSPAdes bins to be annotated prokka_with_compliance = true prokka_compliance_centre = "nfcore"