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azure-pipelines.yml
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###############################################################################
# Conduit CI Checks
###############################################################################
# Ref:
# https://aka.ms/yaml
#####
# TO USE A NEW CONTAINER, UPDATE TAG NAME HERE AS PART OF YOUR PR!
#####
variables:
ubuntu18_tag: alpinedav/ascent-ci:ubuntu-18-devel
# only build merge target pr to develop
trigger: none
pr:
branches:
include:
- develop
# fast fail sanity checks
stages:
- stage: Sanity
jobs:
- job: BLT_Time_Travel_Check
pool:
vmImage: 'ubuntu-latest'
steps:
- checkout: self
clean: boolean
submodules: recursive
- script: |
#######################################
# run our sanity check script
#######################################
git fetch
python scripts/ci/check_blt_time_travel.py
displayName: 'BLT Time Travel Check'
# main checks
# TODO:
# - setup coverage
#
- stage: Main
jobs:
###############################################################################
# Ubuntu 18 build and test, using spack to build tpls
#
# When setup in Ascent, Azure didint have an Ubuntu 18 dev image, so we are
# using the standard Ubuntu 18 container.
#
###############################################################################
- job: Ubuntu_18
pool:
vmImage: 'ubuntu-latest'
container: ${{ variables.ubuntu18_tag }}
timeoutInMinutes: 0
strategy:
matrix:
shared_minimal:
COMPILER_CC: gcc
COMPILER_CXX: g++
COMPILER_FC: gfortran
FORCE_COMPILERS: OFF
COMPILER_SPEC: gcc
BUILD_SHARED_LIBS: ON
CMAKE_BUILD_TYPE: Debug
ENABLE_COVERAGE: OFF
ENABLE_MPI: OFF
ENABLE_DOCS: OFF
ENABLE_RELAY_WEBSERVER: OFF
ENABLE_SILO: OFF
ENABLE_ADIOS: OFF
ENABLE_PARMETIS: OFF
ENABLE_PYTHON: OFF
ENABLE_PYTHON2: OFF
CMAKE_VERSION: 3.14.2
BLT_CXX_STD: c++11
BLT_ENABLE_FIND_MPI: ON
shared_py27:
COMPILER_CC: gcc
COMPILER_CXX: g++
COMPILER_FC: gfortran
COMPILER_SPEC: gcc
FORCE_COMPILERS: OFF
BUILD_SHARED_LIBS: ON
CMAKE_BUILD_TYPE: Debug
ENABLE_COVERAGE: ON
ENABLE_MPI: ON
ENABLE_DOCS: OFF
ENABLE_RELAY_WEBSERVER: ON
ENABLE_SILO: ON
ENABLE_ADIOS: OFF
ENABLE_PYTHON: ON
ENABLE_PARMETIS: ON
ENABLE_PYTHON2: ON
PYTHON2_CONSTRAINTS: " ^[email protected] ^[email protected]"
PYTHON_VERSION: 2.7.18
CMAKE_VERSION: 3.14.2
BLT_CXX_STD: c++11
BLT_ENABLE_FIND_MPI: ON
static_py27:
COMPILER_CC: gcc
COMPILER_CXX: g++
COMPILER_FC: gfortran
COMPILER_SPEC: gcc
FORCE_COMPILERS: OFF
BUILD_SHARED_LIBS: OFF
CMAKE_BUILD_TYPE: Debug
ENABLE_COVERAGE: OFF
ENABLE_MPI: ON
ENABLE_DOCS: OFF
ENABLE_RELAY_WEBSERVER: ON
ENABLE_SILO: ON
ENABLE_ADIOS: OFF
ENABLE_PARMETIS: ON
ENABLE_PYTHON: ON
ENABLE_PYTHON2: ON
PYTHON2_CONSTRAINTS: " ^[email protected] ^[email protected]"
PYTHON_VERSION: 2.7.18
CMAKE_VERSION: 3.14.2
BLT_CXX_STD: c++11
BLT_ENABLE_FIND_MPI: ON
shared_py37:
COMPILER_CC: gcc
COMPILER_CXX: g++
COMPILER_FC: gfortran
COMPILER_SPEC: gcc
FORCE_COMPILERS: OFF
BUILD_SHARED_LIBS: ON
CMAKE_BUILD_TYPE: Debug
ENABLE_COVERAGE: OFF
ENABLE_MPI: ON
ENABLE_DOCS: ON
ENABLE_RELAY_WEBSERVER: ON
ENABLE_SILO: ON
ENABLE_ADIOS: OFF
ENABLE_PARMETIS: ON
ENABLE_PYTHON: ON
ENABLE_PYTHON2: OFF
PYTHON_VERSION: 3.7.6
CMAKE_VERSION: 3.14.2
BLT_CXX_STD: c++11
BLT_ENABLE_FIND_MPI: ON
shared_py38_cmake20:
COMPILER_CC: gcc
COMPILER_CXX: g++
COMPILER_FC: gfortran
COMPILER_SPEC: gcc
FORCE_COMPILERS: OFF
BUILD_SHARED_LIBS: ON
CMAKE_BUILD_TYPE: Debug
ENABLE_COVERAGE: OFF
ENABLE_MPI: ON
ENABLE_DOCS: ON
ENABLE_RELAY_WEBSERVER: ON
ENABLE_SILO: ON
ENABLE_ADIOS: OFF
ENABLE_PARMETIS: ON
ENABLE_PYTHON: ON
ENABLE_PYTHON2: OFF
PYTHON_VERSION: 3.8.8
CMAKE_VERSION: 3.20.0
BLT_CXX_STD: c++11
BLT_ENABLE_FIND_MPI: ON
shared_py38_cmake21:
COMPILER_CC: gcc
COMPILER_CXX: g++
COMPILER_FC: gfortran
COMPILER_SPEC: gcc
FORCE_COMPILERS: OFF
BUILD_SHARED_LIBS: ON
CMAKE_BUILD_TYPE: Debug
ENABLE_COVERAGE: OFF
ENABLE_MPI: ON
ENABLE_DOCS: ON
ENABLE_RELAY_WEBSERVER: ON
ENABLE_SILO: ON
ENABLE_ADIOS: OFF
ENABLE_PARMETIS: ON
ENABLE_PYTHON: ON
ENABLE_PYTHON2: OFF
PYTHON_VERSION: 3.8.8
CMAKE_VERSION: 3.21.1
BLT_CXX_STD: c++11
BLT_ENABLE_FIND_MPI: ON
shared_mpi_compilers_direct:
COMPILER_CC: mpicc
COMPILER_CXX: mpic++
COMPILER_FC: mpif90
COMPILER_SPEC: gcc
FORCE_COMPILERS: ON
BUILD_SHARED_LIBS: ON
CMAKE_BUILD_TYPE: Debug
ENABLE_COVERAGE: OFF
ENABLE_MPI: ON
ENABLE_DOCS: ON
ENABLE_SILO: ON
ENABLE_ADIOS: OFF
ENABLE_PYTHON: OFF
CMAKE_VERSION: 3.21.1
BLT_CXX_STD: c++11
BLT_ENABLE_FIND_MPI: OFF
steps:
- checkout: self
clean: boolean
submodules: recursive
- script: |
##################
# setup build env
##################
# output env
cat etc/*rel*
env
sudo apt-get update
# list pkgs we need
export APT_PKGS=binutils
export APT_PKGS="$APT_PKGS gcc"
export APT_PKGS="$APT_PKGS g++"
export APT_PKGS="$APT_PKGS gfortran"
export APT_PKGS="$APT_PKGS python"
export APT_PKGS="$APT_PKGS git"
export APT_PKGS="$APT_PKGS curl"
export APT_PKGS="$APT_PKGS unzip"
export APT_PKGS="$APT_PKGS wget"
export APT_PKGS="$APT_PKGS build-essential"
export APT_PKGS="$APT_PKGS libncurses-dev"
export APT_PKGS="$APT_PKGS libssl-dev"
export APT_PKGS="$APT_PKGS libblas-dev"
export APT_PKGS="$APT_PKGS liblapack-dev"
export APT_PKGS="$APT_PKGS zlib1g-dev"
export APT_PKGS="$APT_PKGS libgdbm-dev"
export APT_PKGS="$APT_PKGS libreadline-dev"
export APT_PKGS="$APT_PKGS libsqlite3-dev"
export APT_PKGS="$APT_PKGS libbz2-dev"
export APT_PKGS="$APT_PKGS openmpi-bin"
export APT_PKGS="$APT_PKGS libopenmpi-dev"
# install pkgs we need
sudo apt-get -y install $APT_PKGS
displayName: 'Prepare build env'
- script: |
#################################
# run uber to build tpls
#################################
#
pwd
# echo system python details
which python
python --version
# setup spack spec
export SPACK_SPEC="%${COMPILER_SPEC}"
# mpi
if [ $ENABLE_MPI = 'ON' ]; then export SPACK_SPEC="${SPACK_SPEC}+mpi"; fi
if [ $ENABLE_MPI = 'OFF' ]; then export SPACK_SPEC="${SPACK_SPEC}~mpi"; fi
# silo
if [ $ENABLE_SILO = 'ON' ]; then export SPACK_SPEC="${SPACK_SPEC}+silo"; fi
if [ $ENABLE_SILO = 'OFF' ]; then export SPACK_SPEC="${SPACK_SPEC}~silo"; fi
# adios
if [ $ENABLE_ADIOS = 'ON' ]; then export SPACK_SPEC="${SPACK_SPEC}+adios~zfp"; fi
if [ $ENABLE_ADIOS = 'OFF' ]; then export SPACK_SPEC="${SPACK_SPEC}~adios"; fi
# python
if [ $ENABLE_PYTHON = 'ON' ]; then export SPACK_SPEC="${SPACK_SPEC}+python"; fi
if [ $ENABLE_PYTHON = 'OFF' ]; then export SPACK_SPEC="${SPACK_SPEC}~python"; fi
# docs
if [ $ENABLE_DOCS = 'ON' ]; then export SPACK_SPEC="${SPACK_SPEC}+doc"; fi
if [ $ENABLE_DOCS = 'OFF' ]; then export SPACK_SPEC="${SPACK_SPEC}~doc"; fi
# package ver selections and extra tweaks
export SPACK_SPEC="${SPACK_SPEC} ^cmake@${CMAKE_VERSION}"
if [ $ENABLE_SILO = 'ON' ]; then export SPACK_SPEC="${SPACK_SPEC} ^silo~mpi"; fi
# turn off hdf5 mpi support
export SPACK_SPEC="${SPACK_SPEC} ^hdf5~mpi"
# show final spec
echo $SPACK_SPEC
# run uber to build tpls
python scripts/uberenv/uberenv.py -k --pull --spec "${SPACK_SPEC}" --spack-config-dir=scripts/uberenv_configs/spack_configs/configs/alpinedav/ubuntu_18_devel/
displayName: 'Spack Build Tpls'
- script: |
#################################
# configure
#################################
# setup compiler env vars
export CC=${COMPILER_CC}
export CXX=${COMPILER_CXX}
export FC=${COMPILER_FC}
${CC} --version
# capture current path
export ROOT_DIR=`pwd`
# find spack generated host config file
export HOST_CONFIG=`ls ${ROOT_DIR}/uberenv_libs/*.cmake`
echo $HOST_CONFIG
# find spack installed cmake
export CMAKE_BIN_DIR=`ls -d ${ROOT_DIR}/uberenv_libs/spack/opt/spack/*/*/cmake*/bin`
export PATH=${CMAKE_BIN_DIR}:$PATH
echo $PATH
which cmake
cmake --version
# prepare build dir
mkdir build
cd build
# setup cmake options
export CMAKE_OPTS="-C ${HOST_CONFIG}"
export CMAKE_OPTS="${CMAKE_OPTS} -DCMAKE_BUILD_TYPE=${CMAKE_BUILD_TYPE}"
export CMAKE_OPTS="${CMAKE_OPTS} -DBUILD_SHARED_LIBS=${BUILD_SHARED_LIBS}"
export CMAKE_OPTS="${CMAKE_OPTS} -DENABLE_COVERAGE=${ENABLE_COVERAGE}"
export CMAKE_OPTS="${CMAKE_OPTS} -DBLT_CXX_STD=${BLT_CXX_STD}"
export CMAKE_OPTS="${CMAKE_OPTS} -DENABLE_FIND_MPI=${BLT_ENABLE_FIND_MPI}"
export CMAKE_OPTS="${CMAKE_OPTS} -DCMAKE_INSTALL_PREFIX=../install"
if [ $FORCE_COMPILERS = 'ON' ]; then export CMAKE_OPTS="${CMAKE_OPTS} -DCMAKE_C_COMPILER=${COMPILER_CC}"; fi
if [ $FORCE_COMPILERS = 'ON' ]; then export CMAKE_OPTS="${CMAKE_OPTS} -DCMAKE_CXX_COMPILER=${COMPILER_CXX}"; fi
if [ $FORCE_COMPILERS = 'ON' ]; then export CMAKE_OPTS="${CMAKE_OPTS} -DCMAKE_Fortran_COMPILER=${COMPILER_FC}"; fi
if [ $FORCE_COMPILERS = 'ON' ]; then export CMAKE_OPTS="${CMAKE_OPTS} -DMPIEXEC_NUMPROC_FLAG=-n"; fi
# configure
cmake ${CMAKE_OPTS} ../src
displayName: 'Configure with CMake'
- script: |
#################################
# build
#################################
# build
cd build
make VERBOSE=1
displayName: 'Build'
- script: |
#################################
# test
#################################
# find spack installed cmake
export ROOT_DIR=`pwd`
export CMAKE_BIN_DIR=`ls -d ${ROOT_DIR}/uberenv_libs/spack/opt/spack/*/*/cmake*/bin`
export PATH=${CMAKE_BIN_DIR}:$PATH
which ctest
cd build
# run ctest
ctest -T test --output-on-failure -V
displayName: 'Run Unit Tests'
- task: PublishTestResults@2
inputs:
testResultsFormat: 'cTest'
testResultsFiles: '**/Test.xml'
displayName: 'Unit Test Results'
condition: always()
- task: CopyFiles@2
inputs:
contents: 'build/tests/_output/**'
targetFolder: $(Build.ArtifactStagingDirectory)
condition: always()
- task: PublishBuildArtifacts@1
inputs:
pathToPublish: $(Build.ArtifactStagingDirectory)
artifactName: Conduit_Test_Outputs
condition: always()
- script: |
#################################
# install
#################################
cd build
make install
displayName: 'Install'
- script: |
###########################
# using with cmake example
###########################
export CC=${COMPILER_CC}
export CXX=${COMPILER_CXX}
export FC=${COMPILER_FC}
pwd
ls -l
# find spack installed cmake
export ROOT_DIR=`pwd`
export CMAKE_BIN_DIR=`ls -d ${ROOT_DIR}/uberenv_libs/spack/opt/spack/*/*/cmake*/bin`
export PATH=${CMAKE_BIN_DIR}:$PATH
echo $PATH
which cmake
cd install/examples/conduit/using-with-cmake
rm -rf _test_build
mkdir _test_build
cd _test_build
cmake ../
make VERBOSE=1
./conduit_example
displayName: 'Test vs Install (using-with-cmake)'
- script: |
###########################
# using with make example
###########################
export CC=${COMPILER_CC}
export CXX=${COMPILER_CXX}
export FC=${COMPILER_FC}
cat install/share/conduit/conduit_config.mk
pwd
ls -l
cd install/examples/conduit/using-with-make
make
./conduit_example
displayName: 'Test vs Install (using-with-make)'
- script: |
################################
# using with cmake mpi example
###############################
export CC=${COMPILER_CC}
export CXX=${COMPILER_CXX}
export FC=${COMPILER_FC}
pwd
ls -l
# find spack installed cmake
export ROOT_DIR=`pwd`
export CMAKE_BIN_DIR=`ls -d ${ROOT_DIR}/uberenv_libs/spack/opt/spack/*/*/cmake*/bin`
export PATH=${CMAKE_BIN_DIR}:$PATH
echo $PATH
which cmake
cd install/examples/conduit/using-with-cmake-mpi
rm -rf _test_build
mkdir _test_build
cd _test_build
cmake ../
make VERBOSE=1
mpiexec -n 1 ./conduit_mpi_example
displayName: 'Test vs Install (using-with-cmake-mpi)'
condition: eq(variables['ENABLE_MPI'], 'ON')
- script: |
################################
# cpp fort and py example
################################
# only run this when python is enabled
# (there might be a better way to do this with an azure `condition:` stmt)
if [ $ENABLE_PYTHON = 'OFF' ]; then exit 0; fi
pwd
ls -l
# find spack installed cmake
export ROOT_DIR=`pwd`
export CMAKE_BIN_DIR=`ls -d ${ROOT_DIR}/uberenv_libs/spack/opt/spack/*/*/cmake*/bin`
export PATH=${CMAKE_BIN_DIR}:$PATH
echo $PATH
# find spack installed python
export PYTHON_EXE=`ls -d ${ROOT_DIR}/uberenv_libs/spack/opt/spack/*/*/python*/bin/python`
# add conduit module to python path
export PYTHONPATH=${ROOT_DIR}/install/python-modules/
echo $PYTHONPATH
which cmake
# lets build
cd install/examples/conduit/cpp_fort_and_py
rm -rf _test_build
mkdir _test_build
cd _test_build
cmake -DCONDUIT_DIR=${ROOT_DIR}/install -DPYTHON_EXECUTABLE=${PYTHON_EXE} ../
make VERBOSE=1
# lets run!
./conduit_cpp_and_py_ex
./conduit_fort_and_py_ex
displayName: 'Test vs Install (cpp_fort_and_py)'
- script: |
################################################
# using with cmake example vs reloc-ed install
################################################
pwd
ls -l
# find spack installed cmake
export ROOT_DIR=`pwd`
export CMAKE_BIN_DIR=`ls -d ${ROOT_DIR}/uberenv_libs/spack/opt/spack/*/*/cmake*/bin`
export PATH=${CMAKE_BIN_DIR}:$PATH
echo $PATH
which cmake
mv install bananas
cd bananas/examples/conduit/using-with-cmake
rm -rf _test_build
mkdir _test_build
cd _test_build
cmake ../
make VERBOSE=1
./conduit_example
displayName: 'Test vs Relocated Install (using-with-cmake)'
###############################################################################
# Docker build and test case, that leverages our script that calls Docker Build
###############################################################################
- job: Docker_Ubuntu
pool:
vmImage: 'ubuntu-latest'
timeoutInMinutes: 0
steps:
- checkout: self
clean: boolean
submodules: recursive
- script: |
####################
# run docker build
####################
cd src/examples/docker/ubuntu/ && ./example_build.sh
displayName: 'Docker Build'