Merge branch 'development' into experimental

Author: pgleeson

corpus/papers/test/BoyleBerriCohen2012.json

@@ -268,6 +268,7 @@ def process_query(query, model, verbose=False):
             "What are the main types of cell in the C. elegans pharynx?",
             "Give me 3 facts about the coelomocyte system in C. elegans",
             "Tell me about the neurotransmitter betaine in C. elegans",
+            "Tell me about the different locomotory gaits of C. elegans",
         ]
 
         print_("Processing %i queries" % len(queries))

corpus/papers/test/PrimerOnCElegans.pdf.json

@@ -87,6 +87,10 @@ def convert_to_json(paper_ref, paper_info, output_dir):
             "corpus/papers/test/Wang2024_NeurotransmitterAtlas.pdf.json",
             "https://elifesciences.org/articles/95402",
         ],
+        "BoyleBerriCohen2012": [
+            "corpus/papers/test/BoyleBerriCohen2012.json",
+            "https://www.frontiersin.org/journals/computational-neuroscience/articles/10.3389/fncom.2012.00010/full",
+        ],
     }
 
     # Loop through papers and process markdown sections