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dash bio sample inputs
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Diff for: ‎Dash_Bio/Chromosomal/circos_graph_data.json

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# Name: Motor Trend Car Road Tests
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# Description: The data was extracted from the 1974 Motor Trend US magazine, and comprises fuel consumption and 10 aspects of automobile design and performance for 32 automobiles (1973--74 models). (from https://www.rdocumentation.org/packages/datasets/versions/3.5.1/topics/mtcars)
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# Source: https://gist.github.com/seankross/a412dfbd88b3db70b74b
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model mpg cyl disp hp drat wt qsec vs am gear carb
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Mazda RX4 21 6 160 110 3.9 2.62 16.46 0 1 4 4
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Mazda RX4 Wag 21 6 160 110 3.9 2.875 17.02 0 1 4 4
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Datsun 710 22.8 4 108 93 3.85 2.32 18.61 1 1 4 1
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Hornet 4 Drive 21.4 6 258 110 3.08 3.215 19.44 1 0 3 1
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Hornet Sportabout 18.7 8 360 175 3.15 3.44 17.02 0 0 3 2
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Valiant 18.1 6 225 105 2.76 3.46 20.22 1 0 3 1
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Duster 360 14.3 8 360 245 3.21 3.57 15.84 0 0 3 4
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Merc 240D 24.4 4 146.7 62 3.69 3.19 20 1 0 4 2
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Merc 230 22.8 4 140.8 95 3.92 3.15 22.9 1 0 4 2
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Merc 280 19.2 6 167.6 123 3.92 3.44 18.3 1 0 4 4
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Merc 280C 17.8 6 167.6 123 3.92 3.44 18.9 1 0 4 4
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Merc 450SE 16.4 8 275.8 180 3.07 4.07 17.4 0 0 3 3
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Merc 450SL 17.3 8 275.8 180 3.07 3.73 17.6 0 0 3 3
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Merc 450SLC 15.2 8 275.8 180 3.07 3.78 18 0 0 3 3
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Cadillac Fleetwood 10.4 8 472 205 2.93 5.25 17.98 0 0 3 4
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Lincoln Continental 10.4 8 460 215 3 5.424 17.82 0 0 3 4
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Chrysler Imperial 14.7 8 440 230 3.23 5.345 17.42 0 0 3 4
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Fiat 128 32.4 4 78.7 66 4.08 2.2 19.47 1 1 4 1
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Honda Civic 30.4 4 75.7 52 4.93 1.615 18.52 1 1 4 2
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Toyota Corolla 33.9 4 71.1 65 4.22 1.835 19.9 1 1 4 1
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Toyota Corona 21.5 4 120.1 97 3.7 2.465 20.01 1 0 3 1
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Dodge Challenger 15.5 8 318 150 2.76 3.52 16.87 0 0 3 2
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AMC Javelin 15.2 8 304 150 3.15 3.435 17.3 0 0 3 2
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Camaro Z28 13.3 8 350 245 3.73 3.84 15.41 0 0 3 4
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Pontiac Firebird 19.2 8 400 175 3.08 3.845 17.05 0 0 3 2
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Fiat X1-9 27.3 4 79 66 4.08 1.935 18.9 1 1 4 1
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Porsche 914-2 26 4 120.3 91 4.43 2.14 16.7 0 1 5 2
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Lotus Europa 30.4 4 95.1 113 3.77 1.513 16.9 1 1 5 2
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Ford Pantera L 15.8 8 351 264 4.22 3.17 14.5 0 1 5 4
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Ferrari Dino 19.7 6 145 175 3.62 2.77 15.5 0 1 5 6
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Maserati Bora 15 8 301 335 3.54 3.57 14.6 0 1 5 8
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Volvo 142E 21.4 4 121 109 4.11 2.78 18.6 1 1 4 2

Diff for: ‎Dash_Bio/Chromosomal/manhattan_data.csv

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Diff for: ‎Dash_Bio/Chromosomal/mol2d_buckminsterfullerene.json

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{"nodes": [{"id": 1, "atom": "C"}, {"id": 2, "atom": "C"}, {"id": 3, "atom": "C"}, {"id": 4, "atom": "C"}, {"id": 5, "atom": "C"}, {"id": 6, "atom": "C"}, {"id": 7, "atom": "C"}, {"id": 8, "atom": "C"}, {"id": 9, "atom": "C"}, {"id": 10, "atom": "C"}, {"id": 11, "atom": "C"}, {"id": 12, "atom": "C"}, {"id": 13, "atom": "C"}, {"id": 14, "atom": "C"}, {"id": 15, "atom": "C"}, {"id": 16, "atom": "C"}, {"id": 17, "atom": "C"}, {"id": 18, "atom": "C"}, {"id": 19, "atom": "C"}, {"id": 20, "atom": "C"}, {"id": 21, "atom": "C"}, {"id": 22, "atom": "C"}, {"id": 23, "atom": "C"}, {"id": 24, "atom": "C"}, {"id": 25, "atom": "C"}, {"id": 26, "atom": "C"}, {"id": 27, "atom": "C"}, {"id": 28, "atom": "C"}, {"id": 29, "atom": "C"}, {"id": 30, "atom": "C"}, {"id": 31, "atom": "C"}, {"id": 32, "atom": "C"}, {"id": 33, "atom": "C"}, {"id": 34, "atom": "C"}, {"id": 35, "atom": "C"}, {"id": 36, "atom": "C"}, {"id": 37, "atom": "C"}, {"id": 38, "atom": "C"}, {"id": 39, "atom": "C"}, {"id": 40, "atom": "C"}, {"id": 41, "atom": "C"}, {"id": 42, "atom": "C"}, {"id": 43, "atom": "C"}, {"id": 44, "atom": "C"}, {"id": 45, "atom": "C"}, {"id": 46, "atom": "C"}, {"id": 47, "atom": "C"}, {"id": 48, "atom": "C"}, {"id": 49, "atom": "C"}, {"id": 50, "atom": "C"}, {"id": 51, "atom": "C"}, {"id": 52, "atom": "C"}, {"id": 53, "atom": "C"}, {"id": 54, "atom": "C"}, {"id": 55, "atom": "C"}, {"id": 56, "atom": "C"}, {"id": 57, "atom": "C"}, {"id": 58, "atom": "C"}, {"id": 59, "atom": "C"}, {"id": 60, "atom": "C"}], "links": [{"id": 1, "source": 1, "target": 11, "bond": 2, "strength": 1, "distance": 25.2}, {"id": 2, "source": 1, "target": 14, "bond": 1, "strength": 1, "distance": 13.59}, {"id": 3, "source": 1, "target": 16, "bond": 1, "strength": 1, "distance": 13.2}, {"id": 4, "source": 2, "target": 3, "bond": 1, "strength": 1, "distance": 13.13}, {"id": 5, "source": 2, "target": 14, "bond": 2, "strength": 1, "distance": 25.21}, {"id": 6, "source": 2, "target": 19, "bond": 1, "strength": 1, "distance": 13.26}, {"id": 7, "source": 3, "target": 9, "bond": 1, "strength": 1, "distance": 25.33}, {"id": 8, "source": 3, "target": 31, "bond": 2, "strength": 1, "distance": 21.28}, {"id": 9, "source": 4, "target": 25, "bond": 1, "strength": 1, "distance": 13.18}, {"id": 10, "source": 4, "target": 42, "bond": 1, "strength": 1, "distance": 13.15}, {"id": 11, "source": 4, "target": 43, "bond": 2, "strength": 1, "distance": 25.21}, {"id": 12, "source": 5, "target": 28, "bond": 1, "strength": 1, "distance": 25.2}, {"id": 13, "source": 5, "target": 31, "bond": 1, "strength": 1, "distance": 21.34}, {"id": 14, "source": 5, "target": 32, "bond": 2, "strength": 1, "distance": 25.21}, {"id": 15, "source": 6, "target": 10, "bond": 2, "strength": 1, "distance": 25.2}, {"id": 16, "source": 6, "target": 13, "bond": 1, "strength": 1, "distance": 13.56}, {"id": 17, "source": 6, "target": 18, "bond": 1, "strength": 1, "distance": 12.94}, {"id": 18, "source": 7, "target": 8, "bond": 2, "strength": 1, "distance": 25.32}, {"id": 19, "source": 7, "target": 18, "bond": 1, "strength": 1, "distance": 13.55}, {"id": 20, "source": 7, "target": 41, "bond": 1, "strength": 1, "distance": 21.27}, {"id": 21, "source": 8, "target": 15, "bond": 1, "strength": 1, "distance": 21.58}, {"id": 22, "source": 8, "target": 20, "bond": 1, "strength": 1, "distance": 12.89}, {"id": 23, "source": 9, "target": 15, "bond": 2, "strength": 1, "distance": 21.23}, {"id": 24, "source": 9, "target": 55, "bond": 1, "strength": 1, "distance": 13.2}, {"id": 25, "source": 10, "target": 20, "bond": 1, "strength": 1, "distance": 13.63}, {"id": 26, "source": 10, "target": 33, "bond": 1, "strength": 1, "distance": 13.09}, {"id": 27, "source": 11, "target": 22, "bond": 1, "strength": 1, "distance": 12.94}, {"id": 28, "source": 11, "target": 54, "bond": 1, "strength": 1, "distance": 13.62}, {"id": 29, "source": 12, "target": 25, "bond": 1, "strength": 1, "distance": 21.22}, {"id": 30, "source": 12, "target": 40, "bond": 1, "strength": 1, "distance": 21.55}, {"id": 31, "source": 12, "target": 56, "bond": 2, "strength": 1, "distance": 21.37}, {"id": 32, "source": 13, "target": 17, "bond": 1, "strength": 1, "distance": 25.32}, {"id": 33, "source": 13, "target": 49, "bond": 2, "strength": 1, "distance": 21.21}, {"id": 34, "source": 14, "target": 45, "bond": 1, "strength": 1, "distance": 12.9}, {"id": 35, "source": 15, "target": 32, "bond": 1, "strength": 1, "distance": 21.38}, {"id": 36, "source": 16, "target": 46, "bond": 1, "strength": 1, "distance": 21.68}, {"id": 37, "source": 16, "target": 59, "bond": 2, "strength": 1, "distance": 25.33}, {"id": 38, "source": 17, "target": 35, "bond": 1, "strength": 1, "distance": 12.85}, {"id": 39, "source": 17, "target": 47, "bond": 2, "strength": 1, "distance": 21.46}, {"id": 40, "source": 18, "target": 39, "bond": 2, "strength": 1, "distance": 25.21}, {"id": 41, "source": 19, "target": 27, "bond": 2, "strength": 1, "distance": 25.22}, {"id": 42, "source": 19, "target": 59, "bond": 1, "strength": 1, "distance": 13.53}, {"id": 43, "source": 20, "target": 55, "bond": 2, "strength": 1, "distance": 25.22}, {"id": 44, "source": 21, "target": 24, "bond": 1, "strength": 1, "distance": 13.07}, {"id": 45, "source": 21, "target": 35, "bond": 2, "strength": 1, "distance": 25.2}, {"id": 46, "source": 21, "target": 44, "bond": 1, "strength": 1, "distance": 13.23}, {"id": 47, "source": 22, "target": 23, "bond": 1, "strength": 1, "distance": 13.53}, {"id": 48, "source": 22, "target": 53, "bond": 2, "strength": 1, "distance": 25.21}, {"id": 49, "source": 23, "target": 38, "bond": 1, "strength": 1, "distance": 21.25}, {"id": 50, "source": 23, "target": 45, "bond": 2, "strength": 1, "distance": 25.32}, {"id": 51, "source": 24, "target": 25, "bond": 2, "strength": 1, "distance": 25.32}, {"id": 52, "source": 24, "target": 47, "bond": 1, "strength": 1, "distance": 21.29}, {"id": 53, "source": 26, "target": 28, "bond": 2, "strength": 1, "distance": 25.2}, {"id": 54, "source": 26, "target": 37, "bond": 1, "strength": 1, "distance": 21.78}, {"id": 55, "source": 26, "target": 58, "bond": 1, "strength": 1, "distance": 25.22}, {"id": 56, "source": 27, "target": 34, "bond": 1, "strength": 1, "distance": 13.59}, {"id": 57, "source": 27, "target": 55, "bond": 1, "strength": 1, "distance": 13.16}, {"id": 58, "source": 28, "target": 38, "bond": 1, "strength": 1, "distance": 21.61}, {"id": 59, "source": 29, "target": 30, "bond": 1, "strength": 1, "distance": 25.33}, {"id": 60, "source": 29, "target": 38, "bond": 2, "strength": 1, "distance": 21.67}, {"id": 61, "source": 29, "target": 53, "bond": 1, "strength": 1, "distance": 13.11}, {"id": 62, "source": 30, "target": 37, "bond": 2, "strength": 1, "distance": 21.5}, {"id": 63, "source": 30, "target": 42, "bond": 1, "strength": 1, "distance": 13.56}, {"id": 64, "source": 31, "target": 45, "bond": 1, "strength": 1, "distance": 21.49}, {"id": 65, "source": 32, "target": 58, "bond": 1, "strength": 1, 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"target": 57, "bond": 2, "strength": 1, "distance": 25.34}, {"id": 90, "source": 52, "target": 56, "bond": 1, "strength": 1, "distance": 25.21}]}

Diff for: ‎Dash_Bio/Chromosomal/oncoprint_dataset3.json

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[{
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"sample": "TCGA-23-1027-01",
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}, {
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}, {
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}, {
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}, {
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"sample": "TCGA-61-2008-01",
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}, {
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}, {
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}, {
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}, {
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}, {
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}, {
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}, {
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}, {
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}, {
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}, {
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}, {
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}, {
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}, {
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}, {
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}, {
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}, {
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}, {
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"gene": "BRCA2",
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