diff --git a/CHANGELOG.md b/CHANGELOG.md index 591394f..c0d3f2a 100644 --- a/CHANGELOG.md +++ b/CHANGELOG.md @@ -5,15 +5,17 @@ and this project adheres to [Semantic Versioning](https://semver.org/spec/v2.0.0 Naming based on: [Audiologists](https://en.wikipedia.org/wiki/Category:Audiologists). ## v0.7.0 - Raymond Carhart [12/02/2025] - - Removing the mapping subworkflow as it is no longer needed. - - This was a requirement before BLOBTOOLKIT implemented it's own mapping subworkflow. - - This significantly speeds up the pipeline in two ways. - - We no longer have to wait for mapping to complete prior to BTK. - - BTK doesn't have to struggle with the much larger mapped bam that was being created. - - NF-TEST implementation. - - We have implemented an output file sanity check rather than rely soley on pipeline completion. + +- Removing the mapping subworkflow as it is no longer needed. + - This was a requirement before BLOBTOOLKIT implemented it's own mapping subworkflow. + - This significantly speeds up the pipeline in two ways. + - We no longer have to wait for mapping to complete prior to BTK. + - BTK doesn't have to struggle with the much larger mapped bam that was being created. +- NF-TEST implementation. + - We have implemented an output file sanity check rather than rely soley on pipeline completion. ### Software dependencies + No Software updates ### Parameters @@ -23,10 +25,10 @@ No Software updates | --mapped | | ### KNOWN BUG + - BLOBTOOLKIT relies on BUSCO 5.5, which does NOT run with single line fasta! - This needs to be folded, use `seqkit seq -l 70` - ## v0.6.2 - Robert Beiny H2 [09/01/2025] - Modules have been updated to remove conda defaults. diff --git a/nextflow.config b/nextflow.config index 8202943..451a676 100644 --- a/nextflow.config +++ b/nextflow.config @@ -219,12 +219,12 @@ manifest { contributors = [ // TODO nf-core: Update the field with the details of the contributors to your pipeline. New with Nextflow version 24.10.0 [ - name: 'DLBPointon', - affiliation: '', - email: '', - github: '', - contribution: [], // List of contribution types ('author', 'maintainer' or 'contributor') - orcid: '' + name: 'Damon-Lee B Pointon', + affiliation: 'Wellcome Genome Campus, Sanger', + email: 'dp24@sanger.ac.uk', + github: 'DLBPointon', + contribution: ['author', 'maintainer'], // List of contribution types ('author', 'maintainer' or 'contributor') + orcid: '0000-0003-2949-6719' ], ] homePage = 'https://github.com/sanger-tol/ear' @@ -232,7 +232,7 @@ manifest { mainScript = 'main.nf' defaultBranch = 'main' nextflowVersion = '!>=24.04.2' - version = '0.6.2' + version = '0.7.0' doi = 'https://zenodo.org/records/13819520' }