diff --git a/.eslintrc.js b/.eslintrc.js
index e46029e1..3aee8633 100644
--- a/.eslintrc.js
+++ b/.eslintrc.js
@@ -1,18 +1,11 @@
 module.exports = {
-    extends: [
-        "plugin:@typescript-eslint/recommended",
-        "plugin:react/recommended",
-    ],
+    extends: ["plugin:@typescript-eslint/recommended", "plugin:react/recommended"],
     env: {
         mocha: true,
         es6: true,
         browser: true,
     },
-    ignorePatterns: [
-        "examples/webpack.dev.js",
-        ".eslintrc.js",
-        "babel.config.js",
-    ],
+    ignorePatterns: ["examples/webpack.dev.js", ".eslintrc.js", "babel.config.js"],
     parser: "@typescript-eslint/parser",
     parserOptions: {
         project: ["./tsconfig.json", "./src/visGeometry/workers/tsconfig.json"],
@@ -62,10 +55,7 @@ module.exports = {
         "no-var": ["warn"],
         // note you must disable the base rule as it can report incorrect errors
         "no-unused-vars": "off",
-        "@typescript-eslint/no-unused-vars": [
-            "warn",
-            { argsIgnorePattern: "^_" },
-        ],
+        "@typescript-eslint/no-unused-vars": ["warn", { argsIgnorePattern: "^_" }],
     },
     settings: {
         react: {
diff --git a/.github/ISSUE_TEMPLATE/bug_report.md b/.github/ISSUE_TEMPLATE/bug_report.md
index e45528a2..187e2957 100644
--- a/.github/ISSUE_TEMPLATE/bug_report.md
+++ b/.github/ISSUE_TEMPLATE/bug_report.md
@@ -1,10 +1,9 @@
 ---
 name: Bug Report
 about: '"Something''s wrong..."'
-title: ''
+title: ""
 labels: bug
-assignees: ''
-
+assignees: ""
 ---
 
 ## Description
diff --git a/.github/ISSUE_TEMPLATE/feature_request.md b/.github/ISSUE_TEMPLATE/feature_request.md
index 798e7c79..1d000e76 100644
--- a/.github/ISSUE_TEMPLATE/feature_request.md
+++ b/.github/ISSUE_TEMPLATE/feature_request.md
@@ -1,11 +1,10 @@
 ---
 name: Feature Request
 about: '"It would be really cool if x did y..."'
-title: ''
-labels: ''
-assignees: ''
-projects: 'Simularium'
-
+title: ""
+labels: ""
+assignees: ""
+projects: "Simularium"
 ---
 
 ## Use Case
diff --git a/.github/ISSUE_TEMPLATE/maintenance_task.md b/.github/ISSUE_TEMPLATE/maintenance_task.md
index 87c12598..449010f6 100644
--- a/.github/ISSUE_TEMPLATE/maintenance_task.md
+++ b/.github/ISSUE_TEMPLATE/maintenance_task.md
@@ -1,18 +1,13 @@
 ---
 name: Maintenance Task
 about: '"The code base needs cleanup, dependency updates, tests, etc...."'
-title: ''
+title: ""
 labels: maintenance
-assignees: ''
-
+assignees: ""
 ---
 
 ## What needs to happen?
 
-
-
 ## Why should we do this?
 
-
-
 ## When does this need to get done?
diff --git a/.github/PULL_REQUEST_TEMPLATE.md b/.github/PULL_REQUEST_TEMPLATE.md
index a2c78e21..fb6037bf 100644
--- a/.github/PULL_REQUEST_TEMPLATE.md
+++ b/.github/PULL_REQUEST_TEMPLATE.md
@@ -1,48 +1,49 @@
-Time Estimate or Size
-=======
-How long do you expect it to take a reviewer to review this PR? 
+# Time Estimate or Size
+
+How long do you expect it to take a reviewer to review this PR?
 Alternately, is this PR xsmall, small, medium, large, or xlarge?
 
-Problem
-=======
+# Problem
+
 What is the problem this work solves, including
 [Link to story or ticket](https://my-tracking-system.url/ticket-number)
 
-Solution
-========
+# Solution
+
 What I/we did to solve this problem
 
 with @pairperson1
 
 ## Type of change
+
 Please delete options that are not relevant.
 
-* Bug fix (non-breaking change which fixes an issue)
-* New feature (non-breaking change which adds functionality)
-* Breaking change (fix or feature that would cause existing functionality to not work as expected)
-* This change requires a documentation update
-* This change requires updated or new tests
+-   Bug fix (non-breaking change which fixes an issue)
+-   New feature (non-breaking change which adds functionality)
+-   Breaking change (fix or feature that would cause existing functionality to not work as expected)
+-   This change requires a documentation update
+-   This change requires updated or new tests
 
-Change summary:
----------------
-* Tidy, well formulated commit message
-* Another great commit message
-* Something else I/we did
+## Change summary:
+
+-   Tidy, well formulated commit message
+-   Another great commit message
+-   Something else I/we did
+
+## Steps to Verify:
 
-Steps to Verify:
-----------------
 1. A setup step / beginning state
 1. What to do next
 1. Any other instructions
 1. Expected behavior
 1. Suggestions for testing
 
-Screenshots (optional):
------------------------
+## Screenshots (optional):
+
 Show-n-tell images/animations here
 
-Keyfiles (delete if not relevant):
------------------------
+## Keyfiles (delete if not relevant):
+
 1. main file/entry point
 2. other important file
 
diff --git a/.github/workflows/ci.yml b/.github/workflows/ci.yml
index 051928a3..9bf7fb19 100644
--- a/.github/workflows/ci.yml
+++ b/.github/workflows/ci.yml
@@ -58,10 +58,10 @@ jobs:
             - name: Push to branch
               uses: moodiest/push-to-branch-action@develop
               env:
-                 REPO: self
-                 BRANCH: build
-                 FOLDER: dev-build
-                 GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
+                  REPO: self
+                  BRANCH: build
+                  FOLDER: dev-build
+                  GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
 
     publish-stable:
         if: startsWith(github.ref, 'refs/tags/v')
diff --git a/.github/workflows/coverage.yml b/.github/workflows/coverage.yml
index 3c0e80a7..79bdbe06 100644
--- a/.github/workflows/coverage.yml
+++ b/.github/workflows/coverage.yml
@@ -1,4 +1,4 @@
-name: 'coverage'
+name: "coverage"
 on:
     pull_request:
         branches:
diff --git a/.github/workflows/create-issue.yml b/.github/workflows/create-issue.yml
index 036f21a7..6eda0fe8 100644
--- a/.github/workflows/create-issue.yml
+++ b/.github/workflows/create-issue.yml
@@ -1,14 +1,14 @@
 name: Create Issue
 
 on:
-  issues:
-    types: [opened]
+    issues:
+        types: [opened]
 jobs:
-  add-to-project:
-    name: Add issue to project
-    runs-on: ubuntu-latest
-    steps:
-      - uses: actions/add-to-project@v0.5.0
-        with:
-          project-url: https://github.com/orgs/simularium/projects/5
-          github-token: ${{ secrets.SIMULARIUM }}
+    add-to-project:
+        name: Add issue to project
+        runs-on: ubuntu-latest
+        steps:
+            - uses: actions/add-to-project@v0.5.0
+              with:
+                  project-url: https://github.com/orgs/simularium/projects/5
+                  github-token: ${{ secrets.SIMULARIUM }}
diff --git a/.github/workflows/nightly-build.yml b/.github/workflows/nightly-build.yml
index 8073ed49..f8e77a4d 100644
--- a/.github/workflows/nightly-build.yml
+++ b/.github/workflows/nightly-build.yml
@@ -1,42 +1,42 @@
 name: github pages
 
 on:
-  schedule:
-    - cron: "0 0 * * *"
+    schedule:
+        - cron: "0 0 * * *"
 
 jobs:
-  deploy:
-    runs-on: ubuntu-latest
-    steps:
-      - uses: actions/checkout@v3
+    deploy:
+        runs-on: ubuntu-latest
+        steps:
+            - uses: actions/checkout@v3
 
-      - name: Setup Node
-        uses: actions/setup-node@v3
-        with:
-          node-version: "16.x"
+            - name: Setup Node
+              uses: actions/setup-node@v3
+              with:
+                  node-version: "16.x"
 
-      - name: Cache dependencies
- 
-        uses: actions/cache@v3
-        with:
-          path: ~/.npm
-          key: ${{ runner.os }}-node-${{ hashFiles('**/package-lock.json') }}
-          restore-keys: |
-            ${{ runner.os }}-node-
-            
-      - run: npm ci
-      - run: npm run gh-build
-      - name: Prepare tag
-        id: prepare_tag
-        if: startsWith(github.ref, 'refs/tags/')
-        run: |
-          TAG_NAME="${GITHUB_REF##refs/tags/}"
-          echo "::set-output name=tag_name::${TAG_NAME}"
-          echo "::set-output name=deploy_tag_name::deploy-${TAG_NAME}"
-      - name: Deploy
-        uses: peaceiris/actions-gh-pages@v3
-        with:
-          github_token: ${{ secrets.GITHUB_TOKEN }}
-          publish_dir: ./public
-          tag_name: ${{ steps.prepare_tag.outputs.deploy_tag_name }}
-          tag_message: 'Deployment to gh-pages to test new viewer ${{ steps.prepare_tag.outputs.tag_name }}'
+            - name: Cache dependencies
+
+              uses: actions/cache@v3
+              with:
+                  path: ~/.npm
+                  key: ${{ runner.os }}-node-${{ hashFiles('**/package-lock.json') }}
+                  restore-keys: |
+                      ${{ runner.os }}-node-
+
+            - run: npm ci
+            - run: npm run gh-build
+            - name: Prepare tag
+              id: prepare_tag
+              if: startsWith(github.ref, 'refs/tags/')
+              run: |
+                  TAG_NAME="${GITHUB_REF##refs/tags/}"
+                  echo "::set-output name=tag_name::${TAG_NAME}"
+                  echo "::set-output name=deploy_tag_name::deploy-${TAG_NAME}"
+            - name: Deploy
+              uses: peaceiris/actions-gh-pages@v3
+              with:
+                  github_token: ${{ secrets.GITHUB_TOKEN }}
+                  publish_dir: ./public
+                  tag_name: ${{ steps.prepare_tag.outputs.deploy_tag_name }}
+                  tag_message: "Deployment to gh-pages to test new viewer ${{ steps.prepare_tag.outputs.tag_name }}"
diff --git a/.lintstagedrc b/.lintstagedrc
index 2c6fa23b..6b896107 100644
--- a/.lintstagedrc
+++ b/.lintstagedrc
@@ -1,3 +1,3 @@
 {
-  "src/**/*.ts": ["prettier --write"]
-}
\ No newline at end of file
+    "src/**/*.ts": ["prettier --write"]
+}
diff --git a/.prettierrc b/.prettierrc
index 5f9f341b..0b0c6b33 100644
--- a/.prettierrc
+++ b/.prettierrc
@@ -1,4 +1,5 @@
 {
-  "trailingComma": "es5",
-  "tabWidth": 4
-}
\ No newline at end of file
+    "printWidth": 120,
+    "trailingComma": "es5",
+    "tabWidth": 4
+}
diff --git a/CHANGELOG.md b/CHANGELOG.md
index 16c87a03..50dbeee1 100644
--- a/CHANGELOG.md
+++ b/CHANGELOG.md
@@ -6,466 +6,466 @@ Generated by [`auto-changelog`](https://github.com/CookPete/auto-changelog).
 
 #### [v3.8.4](https://github.com/simularium/simularium-viewer/compare/v3.8.3...v3.8.4)
 
-- Feature/session colors [`#400`](https://github.com/simularium/simularium-viewer/pull/400)
-- export AgentData type properly from /types and / simularium [`#401`](https://github.com/simularium/simularium-viewer/pull/401)
-- Bump ws from 7.5.9 to 7.5.10 [`#399`](https://github.com/simularium/simularium-viewer/pull/399)
-- Bump braces from 3.0.2 to 3.0.3 in /examples [`#398`](https://github.com/simularium/simularium-viewer/pull/398)
-- Bump ws from 8.16.0 to 8.17.1 in /examples [`#397`](https://github.com/simularium/simularium-viewer/pull/397)
-- convert vis-type to visType at parse time [`#393`](https://github.com/simularium/simularium-viewer/pull/393)
+-   Feature/session colors [`#400`](https://github.com/simularium/simularium-viewer/pull/400)
+-   export AgentData type properly from /types and / simularium [`#401`](https://github.com/simularium/simularium-viewer/pull/401)
+-   Bump ws from 7.5.9 to 7.5.10 [`#399`](https://github.com/simularium/simularium-viewer/pull/399)
+-   Bump braces from 3.0.2 to 3.0.3 in /examples [`#398`](https://github.com/simularium/simularium-viewer/pull/398)
+-   Bump ws from 8.16.0 to 8.17.1 in /examples [`#397`](https://github.com/simularium/simularium-viewer/pull/397)
+-   convert vis-type to visType at parse time [`#393`](https://github.com/simularium/simularium-viewer/pull/393)
 
 #### [v3.8.3](https://github.com/simularium/simularium-viewer/compare/v3.8.2...v3.8.3)
 
 > 13 June 2024
 
-- Fix/null agent function [`#396`](https://github.com/simularium/simularium-viewer/pull/396)
-- spread null agent object when parsing frames [`#395`](https://github.com/simularium/simularium-viewer/pull/395)
-- send selected agent data to front end [`#392`](https://github.com/simularium/simularium-viewer/pull/392)
+-   Fix/null agent function [`#396`](https://github.com/simularium/simularium-viewer/pull/396)
+-   spread null agent object when parsing frames [`#395`](https://github.com/simularium/simularium-viewer/pull/395)
+-   send selected agent data to front end [`#392`](https://github.com/simularium/simularium-viewer/pull/392)
 
 #### [v3.8.2](https://github.com/simularium/simularium-viewer/compare/v3.8.1...v3.8.2)
 
 > 10 June 2024
 
-- Fix/remove simularium engine specific code [`#391`](https://github.com/simularium/simularium-viewer/pull/391)
+-   Fix/remove simularium engine specific code [`#391`](https://github.com/simularium/simularium-viewer/pull/391)
 
 #### [v3.8.1](https://github.com/simularium/simularium-viewer/compare/v3.8.0...v3.8.1)
 
 > 3 June 2024
 
-- With octopus, we can assume frame per message [`#390`](https://github.com/simularium/simularium-viewer/pull/390)
-- update cache setting [`#388`](https://github.com/simularium/simularium-viewer/pull/388)
+-   With octopus, we can assume frame per message [`#390`](https://github.com/simularium/simularium-viewer/pull/390)
+-   update cache setting [`#388`](https://github.com/simularium/simularium-viewer/pull/388)
 
 #### [v3.8.0](https://github.com/simularium/simularium-viewer/compare/v3.7.4...v3.8.0)
 
 > 23 May 2024
 
-- Fix/plotdata [`#386`](https://github.com/simularium/simularium-viewer/pull/386)
-- Feature/trim cache head [`#381`](https://github.com/simularium/simularium-viewer/pull/381)
+-   Fix/plotdata [`#386`](https://github.com/simularium/simularium-viewer/pull/386)
+-   Feature/trim cache head [`#381`](https://github.com/simularium/simularium-viewer/pull/381)
 
 #### [v3.7.4](https://github.com/simularium/simularium-viewer/compare/v3.7.3...v3.7.4)
 
 > 21 May 2024
 
-- add cancel autoconversion action to viewer [`#385`](https://github.com/simularium/simularium-viewer/pull/385)
+-   add cancel autoconversion action to viewer [`#385`](https://github.com/simularium/simularium-viewer/pull/385)
 
 #### [v3.7.3](https://github.com/simularium/simularium-viewer/compare/v3.7.2...v3.7.3)
 
 > 16 May 2024
 
-- Fix/no firstframetime [`#382`](https://github.com/simularium/simularium-viewer/pull/382)
-- Feature/change to converted file [`#380`](https://github.com/simularium/simularium-viewer/pull/380)
-- Revert "feat: Camera distance is now scaled to >= 90% of the screen real estate" [`903ec61`](https://github.com/simularium/simularium-viewer/commit/903ec61d10cd9735d45437dd848b7604ce4a0647)
-- feat: Camera distance is now scaled to >= 90% of the screen real estate [`e342464`](https://github.com/simularium/simularium-viewer/commit/e3424646f512ed0b08d76b7bb38897664297b4e5)
+-   Fix/no firstframetime [`#382`](https://github.com/simularium/simularium-viewer/pull/382)
+-   Feature/change to converted file [`#380`](https://github.com/simularium/simularium-viewer/pull/380)
+-   Revert "feat: Camera distance is now scaled to >= 90% of the screen real estate" [`903ec61`](https://github.com/simularium/simularium-viewer/commit/903ec61d10cd9735d45437dd848b7604ce4a0647)
+-   feat: Camera distance is now scaled to >= 90% of the screen real estate [`e342464`](https://github.com/simularium/simularium-viewer/commit/e3424646f512ed0b08d76b7bb38897664297b4e5)
 
 #### [v3.7.2](https://github.com/simularium/simularium-viewer/compare/v3.7.1...v3.7.2)
 
 > 8 May 2024
 
-- don't give a parent a color of the children have different colors [`#379`](https://github.com/simularium/simularium-viewer/pull/379)
-- Feature/turn controls back on [`#378`](https://github.com/simularium/simularium-viewer/pull/378)
+-   don't give a parent a color of the children have different colors [`#379`](https://github.com/simularium/simularium-viewer/pull/379)
+-   Feature/turn controls back on [`#378`](https://github.com/simularium/simularium-viewer/pull/378)
 
 #### [v3.7.1](https://github.com/simularium/simularium-viewer/compare/v3.7.0...v3.7.1)
 
 > 11 April 2024
 
-- reset colorsData to default before mapping agent colors when loading a new file [`#376`](https://github.com/simularium/simularium-viewer/pull/376)
-- Bump express from 4.19.0 to 4.19.2 in /examples [`#374`](https://github.com/simularium/simularium-viewer/pull/374)
-- move webpack to example viewer [`#371`](https://github.com/simularium/simularium-viewer/pull/371)
-- onRecordedMovies should be optional [`#369`](https://github.com/simularium/simularium-viewer/pull/369)
-- Bump follow-redirects from 1.15.5 to 1.15.6 [`#370`](https://github.com/simularium/simularium-viewer/pull/370)
-- need to install example deps [`#367`](https://github.com/simularium/simularium-viewer/pull/367)
-- Fix/video config [`#366`](https://github.com/simularium/simularium-viewer/pull/366)
-- Fix/create root [`#365`](https://github.com/simularium/simularium-viewer/pull/365)
-- Feature/freeze camera [`#363`](https://github.com/simularium/simularium-viewer/pull/363)
-- Feature/mp4 download [`#344`](https://github.com/simularium/simularium-viewer/pull/344)
-- add time estimate or size to PR template [`0c058c5`](https://github.com/simularium/simularium-viewer/commit/0c058c5a3d2a974fb5f128a4a215df35e4637ed8)
-- Update CODEOWNERS [`5727f31`](https://github.com/simularium/simularium-viewer/commit/5727f319e200e5482c46859084cd2462d62b0253)
+-   reset colorsData to default before mapping agent colors when loading a new file [`#376`](https://github.com/simularium/simularium-viewer/pull/376)
+-   Bump express from 4.19.0 to 4.19.2 in /examples [`#374`](https://github.com/simularium/simularium-viewer/pull/374)
+-   move webpack to example viewer [`#371`](https://github.com/simularium/simularium-viewer/pull/371)
+-   onRecordedMovies should be optional [`#369`](https://github.com/simularium/simularium-viewer/pull/369)
+-   Bump follow-redirects from 1.15.5 to 1.15.6 [`#370`](https://github.com/simularium/simularium-viewer/pull/370)
+-   need to install example deps [`#367`](https://github.com/simularium/simularium-viewer/pull/367)
+-   Fix/video config [`#366`](https://github.com/simularium/simularium-viewer/pull/366)
+-   Fix/create root [`#365`](https://github.com/simularium/simularium-viewer/pull/365)
+-   Feature/freeze camera [`#363`](https://github.com/simularium/simularium-viewer/pull/363)
+-   Feature/mp4 download [`#344`](https://github.com/simularium/simularium-viewer/pull/344)
+-   add time estimate or size to PR template [`0c058c5`](https://github.com/simularium/simularium-viewer/commit/0c058c5a3d2a974fb5f128a4a215df35e4637ed8)
+-   Update CODEOWNERS [`5727f31`](https://github.com/simularium/simularium-viewer/commit/5727f319e200e5482c46859084cd2462d62b0253)
 
 #### [v3.7.0](https://github.com/simularium/simularium-viewer/compare/v3.6.4...v3.7.0)
 
 > 13 February 2024
 
-- add viewer method to disable pan functionality [`#361`](https://github.com/simularium/simularium-viewer/pull/361)
-- cd to examples folder to run build script [`#360`](https://github.com/simularium/simularium-viewer/pull/360)
-- export modelinfo from index.ts [`#357`](https://github.com/simularium/simularium-viewer/pull/357)
-- Bump follow-redirects from 1.15.2 to 1.15.4 [`#356`](https://github.com/simularium/simularium-viewer/pull/356)
-- Binding simulation [`#355`](https://github.com/simularium/simularium-viewer/pull/355)
-- update net connection settings to use wss for octopus [`#345`](https://github.com/simularium/simularium-viewer/pull/345)
-- Feature/server health check [`#349`](https://github.com/simularium/simularium-viewer/pull/349)
-- when loading smoldyn form, initiate health check, and enable submit button when response comes in [`087dbf5`](https://github.com/simularium/simularium-viewer/commit/087dbf52152744c14564b32d129269f1178e883c)
-- Add new message types, request and handle server health check [`436714c`](https://github.com/simularium/simularium-viewer/commit/436714c8d501298b5826594c7e2e123c85570bfd)
-- add check for connection to remove server to avoid redundant code [`060baca`](https://github.com/simularium/simularium-viewer/commit/060baca87b4bb65109da9b03788047d6abc2c346)
+-   add viewer method to disable pan functionality [`#361`](https://github.com/simularium/simularium-viewer/pull/361)
+-   cd to examples folder to run build script [`#360`](https://github.com/simularium/simularium-viewer/pull/360)
+-   export modelinfo from index.ts [`#357`](https://github.com/simularium/simularium-viewer/pull/357)
+-   Bump follow-redirects from 1.15.2 to 1.15.4 [`#356`](https://github.com/simularium/simularium-viewer/pull/356)
+-   Binding simulation [`#355`](https://github.com/simularium/simularium-viewer/pull/355)
+-   update net connection settings to use wss for octopus [`#345`](https://github.com/simularium/simularium-viewer/pull/345)
+-   Feature/server health check [`#349`](https://github.com/simularium/simularium-viewer/pull/349)
+-   when loading smoldyn form, initiate health check, and enable submit button when response comes in [`087dbf5`](https://github.com/simularium/simularium-viewer/commit/087dbf52152744c14564b32d129269f1178e883c)
+-   Add new message types, request and handle server health check [`436714c`](https://github.com/simularium/simularium-viewer/commit/436714c8d501298b5826594c7e2e123c85570bfd)
+-   add check for connection to remove server to avoid redundant code [`060baca`](https://github.com/simularium/simularium-viewer/commit/060baca87b4bb65109da9b03788047d6abc2c346)
 
 #### [v3.6.4](https://github.com/simularium/simularium-viewer/compare/v3.6.3...v3.6.4)
 
 > 5 December 2023
 
-- Feature/color module [`#352`](https://github.com/simularium/simularium-viewer/pull/352)
-- Fix/add timedata to exports [`#353`](https://github.com/simularium/simularium-viewer/pull/353)
-- update babel to latest release [`#354`](https://github.com/simularium/simularium-viewer/pull/354)
-- Feature/trajectory data v3 [`#350`](https://github.com/simularium/simularium-viewer/pull/350)
-- Update nightly-build.yml [`#348`](https://github.com/simularium/simularium-viewer/pull/348)
-- Fix/color change bug [`#346`](https://github.com/simularium/simularium-viewer/pull/346)
-- Fix/viewer errors [`#343`](https://github.com/simularium/simularium-viewer/pull/343)
-- fix drag n drop in test viewer [`#341`](https://github.com/simularium/simularium-viewer/pull/341)
-- Bump @babel/traverse from 7.21.5 to 7.23.2 [`#337`](https://github.com/simularium/simularium-viewer/pull/337)
-- Fix/orthographic camera ssao [`#340`](https://github.com/simularium/simularium-viewer/pull/340)
-- added the template for release [`#338`](https://github.com/simularium/simularium-viewer/pull/338)
-- camera zoom affects ao but not depth cueing [`e196dd5`](https://github.com/simularium/simularium-viewer/commit/e196dd558705cdd1c3252cfe7aa13c6fff7c9d75)
-- fix AO in ortho mode [`2bdec9d`](https://github.com/simularium/simularium-viewer/commit/2bdec9d1806ea8fa72a824f6dbeef685a20e3458)
-- one more fix to multi-file loading [`528fbc1`](https://github.com/simularium/simularium-viewer/commit/528fbc179913687fb3f8078373f787655e21f6e8)
+-   Feature/color module [`#352`](https://github.com/simularium/simularium-viewer/pull/352)
+-   Fix/add timedata to exports [`#353`](https://github.com/simularium/simularium-viewer/pull/353)
+-   update babel to latest release [`#354`](https://github.com/simularium/simularium-viewer/pull/354)
+-   Feature/trajectory data v3 [`#350`](https://github.com/simularium/simularium-viewer/pull/350)
+-   Update nightly-build.yml [`#348`](https://github.com/simularium/simularium-viewer/pull/348)
+-   Fix/color change bug [`#346`](https://github.com/simularium/simularium-viewer/pull/346)
+-   Fix/viewer errors [`#343`](https://github.com/simularium/simularium-viewer/pull/343)
+-   fix drag n drop in test viewer [`#341`](https://github.com/simularium/simularium-viewer/pull/341)
+-   Bump @babel/traverse from 7.21.5 to 7.23.2 [`#337`](https://github.com/simularium/simularium-viewer/pull/337)
+-   Fix/orthographic camera ssao [`#340`](https://github.com/simularium/simularium-viewer/pull/340)
+-   added the template for release [`#338`](https://github.com/simularium/simularium-viewer/pull/338)
+-   camera zoom affects ao but not depth cueing [`e196dd5`](https://github.com/simularium/simularium-viewer/commit/e196dd558705cdd1c3252cfe7aa13c6fff7c9d75)
+-   fix AO in ortho mode [`2bdec9d`](https://github.com/simularium/simularium-viewer/commit/2bdec9d1806ea8fa72a824f6dbeef685a20e3458)
+-   one more fix to multi-file loading [`528fbc1`](https://github.com/simularium/simularium-viewer/commit/528fbc179913687fb3f8078373f787655e21f6e8)
 
 #### [v3.6.3](https://github.com/simularium/simularium-viewer/compare/v3.6.2...v3.6.3)
 
 > 17 October 2023
 
-- add translation and rotation to fiber agents [`#333`](https://github.com/simularium/simularium-viewer/pull/333)
-- change dropbox links [`#335`](https://github.com/simularium/simularium-viewer/pull/335)
-- fix type exports [`#334`](https://github.com/simularium/simularium-viewer/pull/334)
-- Feature/set agent color [`#325`](https://github.com/simularium/simularium-viewer/pull/325)
-- Bump postcss from 8.4.23 to 8.4.31 [`#331`](https://github.com/simularium/simularium-viewer/pull/331)
-- Feature/set agent color edits [`#328`](https://github.com/simularium/simularium-viewer/pull/328)
-- update test descriptions [`11921e7`](https://github.com/simularium/simularium-viewer/commit/11921e7285539ee254a90e391648474d1373d2f2)
-- Merge commit 'c143785664a358a3d4527c16ea22d70e46a343db' into feature/transform-fibers [`bfacea0`](https://github.com/simularium/simularium-viewer/commit/bfacea0090aabfb21fde755f565382342a9ccac3)
-- move color picker out of viewer [`29efd27`](https://github.com/simularium/simularium-viewer/commit/29efd278a1f76a0e3c87e2625f7a2133fc463dc9)
+-   add translation and rotation to fiber agents [`#333`](https://github.com/simularium/simularium-viewer/pull/333)
+-   change dropbox links [`#335`](https://github.com/simularium/simularium-viewer/pull/335)
+-   fix type exports [`#334`](https://github.com/simularium/simularium-viewer/pull/334)
+-   Feature/set agent color [`#325`](https://github.com/simularium/simularium-viewer/pull/325)
+-   Bump postcss from 8.4.23 to 8.4.31 [`#331`](https://github.com/simularium/simularium-viewer/pull/331)
+-   Feature/set agent color edits [`#328`](https://github.com/simularium/simularium-viewer/pull/328)
+-   update test descriptions [`11921e7`](https://github.com/simularium/simularium-viewer/commit/11921e7285539ee254a90e391648474d1373d2f2)
+-   Merge commit 'c143785664a358a3d4527c16ea22d70e46a343db' into feature/transform-fibers [`bfacea0`](https://github.com/simularium/simularium-viewer/commit/bfacea0090aabfb21fde755f565382342a9ccac3)
+-   move color picker out of viewer [`29efd27`](https://github.com/simularium/simularium-viewer/commit/29efd278a1f76a0e3c87e2625f7a2133fc463dc9)
 
 #### [v3.6.2](https://github.com/simularium/simularium-viewer/compare/v3.6.1...v3.6.2)
 
 > 25 August 2023
 
-- delay webgl init until after component mounted [`#327`](https://github.com/simularium/simularium-viewer/pull/327)
-- Bump tough-cookie from 4.1.2 to 4.1.3 [`#322`](https://github.com/simularium/simularium-viewer/pull/322)
-- Bump word-wrap from 1.2.3 to 1.2.4 [`#323`](https://github.com/simularium/simularium-viewer/pull/323)
-- bind setCameraType and this in controller [`#324`](https://github.com/simularium/simularium-viewer/pull/324)
-- Catch error that occurs in race condition [`#321`](https://github.com/simularium/simularium-viewer/pull/321)
-- Fix/ao with zoom [`#315`](https://github.com/simularium/simularium-viewer/pull/315)
-- Fix `VisGeometry` constructor overwriting properties it initializes [`#319`](https://github.com/simularium/simularium-viewer/pull/319)
-- Feature/orthographic camera [`#314`](https://github.com/simularium/simularium-viewer/pull/314)
-- replace AO shader with one that seems more robust and has more tuneable parameters. blur pass still to-do [`b9915a4`](https://github.com/simularium/simularium-viewer/commit/b9915a467e26b37512f00b0ea2436c54f5eb8b89)
-- integrate with blur pass and use only first ao pass for result [`42f34e1`](https://github.com/simularium/simularium-viewer/commit/42f34e1e40e5e1a4e4341755d8f6224df1efd60e)
-- wip, tweaking with a ratio value [`cf633a8`](https://github.com/simularium/simularium-viewer/commit/cf633a8c5a6b414a6b93ec7c95be159638a49441)
+-   delay webgl init until after component mounted [`#327`](https://github.com/simularium/simularium-viewer/pull/327)
+-   Bump tough-cookie from 4.1.2 to 4.1.3 [`#322`](https://github.com/simularium/simularium-viewer/pull/322)
+-   Bump word-wrap from 1.2.3 to 1.2.4 [`#323`](https://github.com/simularium/simularium-viewer/pull/323)
+-   bind setCameraType and this in controller [`#324`](https://github.com/simularium/simularium-viewer/pull/324)
+-   Catch error that occurs in race condition [`#321`](https://github.com/simularium/simularium-viewer/pull/321)
+-   Fix/ao with zoom [`#315`](https://github.com/simularium/simularium-viewer/pull/315)
+-   Fix `VisGeometry` constructor overwriting properties it initializes [`#319`](https://github.com/simularium/simularium-viewer/pull/319)
+-   Feature/orthographic camera [`#314`](https://github.com/simularium/simularium-viewer/pull/314)
+-   replace AO shader with one that seems more robust and has more tuneable parameters. blur pass still to-do [`b9915a4`](https://github.com/simularium/simularium-viewer/commit/b9915a467e26b37512f00b0ea2436c54f5eb8b89)
+-   integrate with blur pass and use only first ao pass for result [`42f34e1`](https://github.com/simularium/simularium-viewer/commit/42f34e1e40e5e1a4e4341755d8f6224df1efd60e)
+-   wip, tweaking with a ratio value [`cf633a8`](https://github.com/simularium/simularium-viewer/commit/cf633a8c5a6b414a6b93ec7c95be159638a49441)
 
 #### [v3.6.1](https://github.com/simularium/simularium-viewer/compare/v3.6.0...v3.6.1)
 
 > 1 June 2023
 
-- make all json message handlers into arrow functions [`#318`](https://github.com/simularium/simularium-viewer/pull/318)
-- Bug fix: Default to secureConnection = true if it not defined [`#316`](https://github.com/simularium/simularium-viewer/pull/316)
-- remove unused imports [`6160b83`](https://github.com/simularium/simularium-viewer/commit/6160b830f693a47a6a2b2752fd7d1eff849aa01a)
-- default to secureConnection = true if it is undefined [`81e7b9f`](https://github.com/simularium/simularium-viewer/commit/81e7b9fee6b842cae2564ede31f3e48342b1fb0f)
+-   make all json message handlers into arrow functions [`#318`](https://github.com/simularium/simularium-viewer/pull/318)
+-   Bug fix: Default to secureConnection = true if it not defined [`#316`](https://github.com/simularium/simularium-viewer/pull/316)
+-   remove unused imports [`6160b83`](https://github.com/simularium/simularium-viewer/commit/6160b830f693a47a6a2b2752fd7d1eff849aa01a)
+-   default to secureConnection = true if it is undefined [`81e7b9f`](https://github.com/simularium/simularium-viewer/commit/81e7b9fee6b842cae2564ede31f3e48342b1fb0f)
 
 #### [v3.6.0](https://github.com/simularium/simularium-viewer/compare/v3.5.1...v3.6.0)
 
 > 30 May 2023
 
-- Fix/interface simularium file [`#313`](https://github.com/simularium/simularium-viewer/pull/313)
-- Update websocket messaging for octopus [`#302`](https://github.com/simularium/simularium-viewer/pull/302)
-- Fix/threejs types [`#312`](https://github.com/simularium/simularium-viewer/pull/312)
-- Fix/init canvas size [`#307`](https://github.com/simularium/simularium-viewer/pull/307)
-- Add basic call for metrics calculation [`#296`](https://github.com/simularium/simularium-viewer/pull/296)
-- Feature/send smoldyn data to websocket [`#292`](https://github.com/simularium/simularium-viewer/pull/292)
-- back to threejs 0.137 [`1cf5177`](https://github.com/simularium/simularium-viewer/commit/1cf5177399523419426239f3d8ec0d23009bce6c)
-- start to do some type cleanup related to threejs [`1ea8067`](https://github.com/simularium/simularium-viewer/commit/1ea8067e9e78ca9509b580fdbc10869004286ad5)
-- Move websocket management to separate WebsocketClient class and implement IController as separate RemoteController class [`a369f04`](https://github.com/simularium/simularium-viewer/commit/a369f0413f208d98be902511c2a6d90ff6f8e0e7)
+-   Fix/interface simularium file [`#313`](https://github.com/simularium/simularium-viewer/pull/313)
+-   Update websocket messaging for octopus [`#302`](https://github.com/simularium/simularium-viewer/pull/302)
+-   Fix/threejs types [`#312`](https://github.com/simularium/simularium-viewer/pull/312)
+-   Fix/init canvas size [`#307`](https://github.com/simularium/simularium-viewer/pull/307)
+-   Add basic call for metrics calculation [`#296`](https://github.com/simularium/simularium-viewer/pull/296)
+-   Feature/send smoldyn data to websocket [`#292`](https://github.com/simularium/simularium-viewer/pull/292)
+-   back to threejs 0.137 [`1cf5177`](https://github.com/simularium/simularium-viewer/commit/1cf5177399523419426239f3d8ec0d23009bce6c)
+-   start to do some type cleanup related to threejs [`1ea8067`](https://github.com/simularium/simularium-viewer/commit/1ea8067e9e78ca9509b580fdbc10869004286ad5)
+-   Move websocket management to separate WebsocketClient class and implement IController as separate RemoteController class [`a369f04`](https://github.com/simularium/simularium-viewer/commit/a369f0413f208d98be902511c2a6d90ff6f8e0e7)
 
 #### [v3.5.1](https://github.com/simularium/simularium-viewer/compare/v3.5.0...v3.5.1)
 
 > 13 January 2023
 
-- Bump json5 and css-loader [`#298`](https://github.com/simularium/simularium-viewer/pull/298)
-- Refactor web worker into proper source code file [`#297`](https://github.com/simularium/simularium-viewer/pull/297)
-- move visdata json parsing into a worker that can be linted and typechecked [`097e110`](https://github.com/simularium/simularium-viewer/commit/097e11005cae0792a371c0657c2af33abfdbaae5)
+-   Bump json5 and css-loader [`#298`](https://github.com/simularium/simularium-viewer/pull/298)
+-   Refactor web worker into proper source code file [`#297`](https://github.com/simularium/simularium-viewer/pull/297)
+-   move visdata json parsing into a worker that can be linted and typechecked [`097e110`](https://github.com/simularium/simularium-viewer/commit/097e11005cae0792a371c0657c2af33abfdbaae5)
 
 #### [v3.5.0](https://github.com/simularium/simularium-viewer/compare/v3.4.0...v3.5.0)
 
 > 14 December 2022
 
-- Bump decode-uri-component from 0.2.0 to 0.2.2 [`#295`](https://github.com/simularium/simularium-viewer/pull/295)
-- Feature/dev build [`#293`](https://github.com/simularium/simularium-viewer/pull/293)
-- Fix/worker loading [`#290`](https://github.com/simularium/simularium-viewer/pull/290)
-- Bump loader-utils from 1.4.0 to 1.4.2 [`#291`](https://github.com/simularium/simularium-viewer/pull/291)
-- increase number of pdb atoms for levels of detail [`#285`](https://github.com/simularium/simularium-viewer/pull/285)
-- Fix/workflows [`#289`](https://github.com/simularium/simularium-viewer/pull/289)
-- Add first key to path in smoldyn form [`#286`](https://github.com/simularium/simularium-viewer/pull/286)
-- update dep [`a04d576`](https://github.com/simularium/simularium-viewer/commit/a04d5768a1b2996e93b9958f294c5e8805beacd2)
-- new install [`4be805f`](https://github.com/simularium/simularium-viewer/commit/4be805f736ba54b6d259ef6dc8e7a791fb16741a)
-- move copy files to npm [`4199dbc`](https://github.com/simularium/simularium-viewer/commit/4199dbc80b19feba2f11270f790d8cd35b730d5b)
+-   Bump decode-uri-component from 0.2.0 to 0.2.2 [`#295`](https://github.com/simularium/simularium-viewer/pull/295)
+-   Feature/dev build [`#293`](https://github.com/simularium/simularium-viewer/pull/293)
+-   Fix/worker loading [`#290`](https://github.com/simularium/simularium-viewer/pull/290)
+-   Bump loader-utils from 1.4.0 to 1.4.2 [`#291`](https://github.com/simularium/simularium-viewer/pull/291)
+-   increase number of pdb atoms for levels of detail [`#285`](https://github.com/simularium/simularium-viewer/pull/285)
+-   Fix/workflows [`#289`](https://github.com/simularium/simularium-viewer/pull/289)
+-   Add first key to path in smoldyn form [`#286`](https://github.com/simularium/simularium-viewer/pull/286)
+-   update dep [`a04d576`](https://github.com/simularium/simularium-viewer/commit/a04d5768a1b2996e93b9958f294c5e8805beacd2)
+-   new install [`4be805f`](https://github.com/simularium/simularium-viewer/commit/4be805f736ba54b6d259ef6dc8e7a791fb16741a)
+-   move copy files to npm [`4199dbc`](https://github.com/simularium/simularium-viewer/commit/4199dbc80b19feba2f11270f790d8cd35b730d5b)
 
 #### [v3.4.0](https://github.com/simularium/simularium-viewer/compare/v3.3.3...v3.4.0)
 
 > 5 September 2022
 
-- Feature/UI template [`#274`](https://github.com/simularium/simularium-viewer/pull/274)
-- fix the "Hide All" in the demo viewer [`#284`](https://github.com/simularium/simularium-viewer/pull/284)
-- Feature/improve cif loader [`#281`](https://github.com/simularium/simularium-viewer/pull/281)
-- Feature/proto live mode [`#279`](https://github.com/simularium/simularium-viewer/pull/279)
-- download biological unit from pdb [`#277`](https://github.com/simularium/simularium-viewer/pull/277)
-- Bump terser from 5.12.0 to 5.14.2 [`#278`](https://github.com/simularium/simularium-viewer/pull/278)
-- Feature/metaballs [`#261`](https://github.com/simularium/simularium-viewer/pull/261)
-- try out a lower level cif parser [`4b1265a`](https://github.com/simularium/simularium-viewer/commit/4b1265adf6e5fe0391a7dd932d3b76331d2df11c)
-- get marching cubes object to pass all the way to draw call [`5c90e11`](https://github.com/simularium/simularium-viewer/commit/5c90e119f551e41567fedb8bf097f35dcd9727d1)
-- wip creating metaball objects using threejs built in implementation [`2be43a9`](https://github.com/simularium/simularium-viewer/commit/2be43a9dc93122e04c3fecd210ad87df3bfcab94)
+-   Feature/UI template [`#274`](https://github.com/simularium/simularium-viewer/pull/274)
+-   fix the "Hide All" in the demo viewer [`#284`](https://github.com/simularium/simularium-viewer/pull/284)
+-   Feature/improve cif loader [`#281`](https://github.com/simularium/simularium-viewer/pull/281)
+-   Feature/proto live mode [`#279`](https://github.com/simularium/simularium-viewer/pull/279)
+-   download biological unit from pdb [`#277`](https://github.com/simularium/simularium-viewer/pull/277)
+-   Bump terser from 5.12.0 to 5.14.2 [`#278`](https://github.com/simularium/simularium-viewer/pull/278)
+-   Feature/metaballs [`#261`](https://github.com/simularium/simularium-viewer/pull/261)
+-   try out a lower level cif parser [`4b1265a`](https://github.com/simularium/simularium-viewer/commit/4b1265adf6e5fe0391a7dd932d3b76331d2df11c)
+-   get marching cubes object to pass all the way to draw call [`5c90e11`](https://github.com/simularium/simularium-viewer/commit/5c90e119f551e41567fedb8bf097f35dcd9727d1)
+-   wip creating metaball objects using threejs built in implementation [`2be43a9`](https://github.com/simularium/simularium-viewer/commit/2be43a9dc93122e04c3fecd210ad87df3bfcab94)
 
 #### [v3.3.3](https://github.com/simularium/simularium-viewer/compare/v3.3.2...v3.3.3)
 
 > 28 June 2022
 
-- Feature/tweak view settings for pdb [`#267`](https://github.com/simularium/simularium-viewer/pull/267)
-- Bump async from 2.6.3 to 2.6.4 [`#265`](https://github.com/simularium/simularium-viewer/pull/265)
-- Update LICENSE [`d450bd7`](https://github.com/simularium/simularium-viewer/commit/d450bd723a61598ac59bb7f9f59014164eac1d51)
-- tweaking some settings, adding some comments [`c069ace`](https://github.com/simularium/simularium-viewer/commit/c069acee2002aea36bc10cf3ddde1bc964c779b3)
-- instead of applying ao settings at load time, simply update defaults [`1ab904a`](https://github.com/simularium/simularium-viewer/commit/1ab904a4882e3f7ef48aac9085936f5fc20cc773)
+-   Feature/tweak view settings for pdb [`#267`](https://github.com/simularium/simularium-viewer/pull/267)
+-   Bump async from 2.6.3 to 2.6.4 [`#265`](https://github.com/simularium/simularium-viewer/pull/265)
+-   Update LICENSE [`d450bd7`](https://github.com/simularium/simularium-viewer/commit/d450bd723a61598ac59bb7f9f59014164eac1d51)
+-   tweaking some settings, adding some comments [`c069ace`](https://github.com/simularium/simularium-viewer/commit/c069acee2002aea36bc10cf3ddde1bc964c779b3)
+-   instead of applying ao settings at load time, simply update defaults [`1ab904a`](https://github.com/simularium/simularium-viewer/commit/1ab904a4882e3f7ef48aac9085936f5fc20cc773)
 
 #### [v3.3.2](https://github.com/simularium/simularium-viewer/compare/v3.3.1...v3.3.2)
 
 > 27 April 2022
 
-- Feature/export i simularium file [`#262`](https://github.com/simularium/simularium-viewer/pull/262)
-- Feature/cubes [`#260`](https://github.com/simularium/simularium-viewer/pull/260)
-- Bump minimist from 1.2.5 to 1.2.6 [`#259`](https://github.com/simularium/simularium-viewer/pull/259)
-- Bump node-forge from 1.2.1 to 1.3.0 [`#258`](https://github.com/simularium/simularium-viewer/pull/258)
-- Feature/refactor viewer from data [`#257`](https://github.com/simularium/simularium-viewer/pull/257)
-- Feature/cam capture [`#249`](https://github.com/simularium/simularium-viewer/pull/249)
-- Feature/load binary trajectories [`#247`](https://github.com/simularium/simularium-viewer/pull/247)
-- fix focus when fiber was clicked by checking for correct type [`#250`](https://github.com/simularium/simularium-viewer/pull/250)
-- Bump follow-redirects from 1.14.7 to 1.14.8 [`#246`](https://github.com/simularium/simularium-viewer/pull/246)
-- Feature/update three [`#244`](https://github.com/simularium/simularium-viewer/pull/244)
-- Bump node-fetch from 2.6.6 to 2.6.7 [`#243`](https://github.com/simularium/simularium-viewer/pull/243)
-- correct args passed to eslint [`#242`](https://github.com/simularium/simularium-viewer/pull/242)
-- cleanup [`8b4b6fb`](https://github.com/simularium/simularium-viewer/commit/8b4b6fbfe08fd7a1a6944d6bd3788aa4f574ff3c)
-- update package-lock [`2fb743a`](https://github.com/simularium/simularium-viewer/commit/2fb743ab672d28f026d7fdf33a486bcecc20e77b)
-- fix the sample app build: css file was not being pre built [`349063d`](https://github.com/simularium/simularium-viewer/commit/349063dfc6f6537126300ccc295abe1aa013adc2)
+-   Feature/export i simularium file [`#262`](https://github.com/simularium/simularium-viewer/pull/262)
+-   Feature/cubes [`#260`](https://github.com/simularium/simularium-viewer/pull/260)
+-   Bump minimist from 1.2.5 to 1.2.6 [`#259`](https://github.com/simularium/simularium-viewer/pull/259)
+-   Bump node-forge from 1.2.1 to 1.3.0 [`#258`](https://github.com/simularium/simularium-viewer/pull/258)
+-   Feature/refactor viewer from data [`#257`](https://github.com/simularium/simularium-viewer/pull/257)
+-   Feature/cam capture [`#249`](https://github.com/simularium/simularium-viewer/pull/249)
+-   Feature/load binary trajectories [`#247`](https://github.com/simularium/simularium-viewer/pull/247)
+-   fix focus when fiber was clicked by checking for correct type [`#250`](https://github.com/simularium/simularium-viewer/pull/250)
+-   Bump follow-redirects from 1.14.7 to 1.14.8 [`#246`](https://github.com/simularium/simularium-viewer/pull/246)
+-   Feature/update three [`#244`](https://github.com/simularium/simularium-viewer/pull/244)
+-   Bump node-fetch from 2.6.6 to 2.6.7 [`#243`](https://github.com/simularium/simularium-viewer/pull/243)
+-   correct args passed to eslint [`#242`](https://github.com/simularium/simularium-viewer/pull/242)
+-   cleanup [`8b4b6fb`](https://github.com/simularium/simularium-viewer/commit/8b4b6fbfe08fd7a1a6944d6bd3788aa4f574ff3c)
+-   update package-lock [`2fb743a`](https://github.com/simularium/simularium-viewer/commit/2fb743ab672d28f026d7fdf33a486bcecc20e77b)
+-   fix the sample app build: css file was not being pre built [`349063d`](https://github.com/simularium/simularium-viewer/commit/349063dfc6f6537126300ccc295abe1aa013adc2)
 
 #### [v3.3.1](https://github.com/simularium/simularium-viewer/compare/v3.3.0...v3.3.1)
 
 > 10 January 2022
 
-- Add repository to package.json [`deccafb`](https://github.com/simularium/simularium-viewer/commit/deccafb591ac223df94b8037713b8f58639852a3)
+-   Add repository to package.json [`deccafb`](https://github.com/simularium/simularium-viewer/commit/deccafb591ac223df94b8037713b8f58639852a3)
 
 #### [v3.3.0](https://github.com/simularium/simularium-viewer/compare/v3.2.2...v3.3.0)
 
 > 10 January 2022
 
-- Fix/frame time issues when streamed trajectory doesn't start at t=0 [`#235`](https://github.com/simularium/simularium-viewer/pull/235)
-- Fix/dependabot [`#233`](https://github.com/simularium/simularium-viewer/pull/233)
-- remove gradle [`#230`](https://github.com/simularium/simularium-viewer/pull/230)
-- updated package-lock [`aca194e`](https://github.com/simularium/simularium-viewer/commit/aca194eb54e1907cedb487f97ac60a391479a43c)
-- remove cssnano [`6218d5a`](https://github.com/simularium/simularium-viewer/commit/6218d5abfd806bbf3dfc74865e164fdb0601e517)
-- add tweakpane and attach the debug controls to a keypress [`d9ebf66`](https://github.com/simularium/simularium-viewer/commit/d9ebf66544fd85cda8d641738531d63c644bc6ff)
+-   Fix/frame time issues when streamed trajectory doesn't start at t=0 [`#235`](https://github.com/simularium/simularium-viewer/pull/235)
+-   Fix/dependabot [`#233`](https://github.com/simularium/simularium-viewer/pull/233)
+-   remove gradle [`#230`](https://github.com/simularium/simularium-viewer/pull/230)
+-   updated package-lock [`aca194e`](https://github.com/simularium/simularium-viewer/commit/aca194eb54e1907cedb487f97ac60a391479a43c)
+-   remove cssnano [`6218d5a`](https://github.com/simularium/simularium-viewer/commit/6218d5abfd806bbf3dfc74865e164fdb0601e517)
+-   add tweakpane and attach the debug controls to a keypress [`d9ebf66`](https://github.com/simularium/simularium-viewer/commit/d9ebf66544fd85cda8d641738531d63c644bc6ff)
 
 #### [v3.2.2](https://github.com/simularium/simularium-viewer/compare/v3.2.1...v3.2.2)
 
 > 8 November 2021
 
-- Fix/use "new" to construct a new instance of Color [`#227`](https://github.com/simularium/simularium-viewer/pull/227)
+-   Fix/use "new" to construct a new instance of Color [`#227`](https://github.com/simularium/simularium-viewer/pull/227)
 
 #### [v3.2.1](https://github.com/simularium/simularium-viewer/compare/v3.2.0...v3.2.1)
 
 > 8 November 2021
 
-- Fix/export FrontEndError [`#225`](https://github.com/simularium/simularium-viewer/pull/225)
+-   Fix/export FrontEndError [`#225`](https://github.com/simularium/simularium-viewer/pull/225)
 
 #### [v3.2.0](https://github.com/simularium/simularium-viewer/compare/v3.1.0...v3.2.0)
 
 > 5 November 2021
 
-- Feature/error levels [`#223`](https://github.com/simularium/simularium-viewer/pull/223)
-- add a nightly build script [`#221`](https://github.com/simularium/simularium-viewer/pull/221)
-- fix issue with color varying across same agent [`#222`](https://github.com/simularium/simularium-viewer/pull/222)
-- change error handeling interface [`0f435bb`](https://github.com/simularium/simularium-viewer/commit/0f435bb506863c407b00ab4b90abb7f67c97f044)
-- change front end error interface slightly [`ba273b4`](https://github.com/simularium/simularium-viewer/commit/ba273b40ede288113dfddf89f58e26f485a769e1)
-- add comments about internal errors verses FrontEndErrors [`c7f9c91`](https://github.com/simularium/simularium-viewer/commit/c7f9c918a6733710efa9443ed47a35538d6b286a)
+-   Feature/error levels [`#223`](https://github.com/simularium/simularium-viewer/pull/223)
+-   add a nightly build script [`#221`](https://github.com/simularium/simularium-viewer/pull/221)
+-   fix issue with color varying across same agent [`#222`](https://github.com/simularium/simularium-viewer/pull/222)
+-   change error handeling interface [`0f435bb`](https://github.com/simularium/simularium-viewer/commit/0f435bb506863c407b00ab4b90abb7f67c97f044)
+-   change front end error interface slightly [`ba273b4`](https://github.com/simularium/simularium-viewer/commit/ba273b40ede288113dfddf89f58e26f485a769e1)
+-   add comments about internal errors verses FrontEndErrors [`c7f9c91`](https://github.com/simularium/simularium-viewer/commit/c7f9c918a6733710efa9443ed47a35538d6b286a)
 
 #### [v3.1.0](https://github.com/simularium/simularium-viewer/compare/v3.0.4...v3.1.0)
 
 > 29 October 2021
 
-- load PDB by ID and mmCIF files [`#215`](https://github.com/simularium/simularium-viewer/pull/215)
-- Fix/parent color [`#213`](https://github.com/simularium/simularium-viewer/pull/213)
-- add unmodified to displaydata [`#216`](https://github.com/simularium/simularium-viewer/pull/216)
-- add CIF as a GeometryDisplayType [`0b1110f`](https://github.com/simularium/simularium-viewer/commit/0b1110fd0aee000e5128e1453862cd81a256944e)
-- if all the colors are the same, use that for parent [`3cc6bd4`](https://github.com/simularium/simularium-viewer/commit/3cc6bd4e19ddd177d186e4d2b6e1079e14fc94ca)
-- redo logic for pdb vs cif loading, and remove CIF as a displaytype [`db91ce0`](https://github.com/simularium/simularium-viewer/commit/db91ce06fb94b5a10b3e0eabde134af9988cbd59)
+-   load PDB by ID and mmCIF files [`#215`](https://github.com/simularium/simularium-viewer/pull/215)
+-   Fix/parent color [`#213`](https://github.com/simularium/simularium-viewer/pull/213)
+-   add unmodified to displaydata [`#216`](https://github.com/simularium/simularium-viewer/pull/216)
+-   add CIF as a GeometryDisplayType [`0b1110f`](https://github.com/simularium/simularium-viewer/commit/0b1110fd0aee000e5128e1453862cd81a256944e)
+-   if all the colors are the same, use that for parent [`3cc6bd4`](https://github.com/simularium/simularium-viewer/commit/3cc6bd4e19ddd177d186e4d2b6e1079e14fc94ca)
+-   redo logic for pdb vs cif loading, and remove CIF as a displaytype [`db91ce0`](https://github.com/simularium/simularium-viewer/commit/db91ce06fb94b5a10b3e0eabde134af9988cbd59)
 
 #### [v3.0.4](https://github.com/simularium/simularium-viewer/compare/v3.0.3...v3.0.4)
 
 > 19 October 2021
 
-- make sure previous fiber data is copied when reallocation is needed [`#212`](https://github.com/simularium/simularium-viewer/pull/212)
+-   make sure previous fiber data is copied when reallocation is needed [`#212`](https://github.com/simularium/simularium-viewer/pull/212)
 
 #### [v3.0.3](https://github.com/simularium/simularium-viewer/compare/v3.0.2...v3.0.3)
 
 > 18 October 2021
 
-- Fix/color types [`#208`](https://github.com/simularium/simularium-viewer/pull/208)
-- clean up type errors in example [`a0c0fb8`](https://github.com/simularium/simularium-viewer/commit/a0c0fb8beaf72aca7337db87f16e035a4016b367)
-- simplify typing [`89539cc`](https://github.com/simularium/simularium-viewer/commit/89539ccbbcd5ddbb530867e6d83fa94230e32368)
-- force default color list to be either list of numbers or strings [`2a190c2`](https://github.com/simularium/simularium-viewer/commit/2a190c2a4290d1279ac885fa1c3e74c8601cabf9)
+-   Fix/color types [`#208`](https://github.com/simularium/simularium-viewer/pull/208)
+-   clean up type errors in example [`a0c0fb8`](https://github.com/simularium/simularium-viewer/commit/a0c0fb8beaf72aca7337db87f16e035a4016b367)
+-   simplify typing [`89539cc`](https://github.com/simularium/simularium-viewer/commit/89539ccbbcd5ddbb530867e6d83fa94230e32368)
+-   force default color list to be either list of numbers or strings [`2a190c2`](https://github.com/simularium/simularium-viewer/commit/2a190c2a4290d1279ac885fa1c3e74c8601cabf9)
 
 #### [v3.0.2](https://github.com/simularium/simularium-viewer/compare/v3.0.1...v3.0.2)
 
 > 15 October 2021
 
-- use default props for default colors, plus update interface [`#205`](https://github.com/simularium/simularium-viewer/pull/205)
-- Feature/user colors [`#204`](https://github.com/simularium/simularium-viewer/pull/204)
-- move setAgentColors to selection interface for testablity [`4d1b4bb`](https://github.com/simularium/simularium-viewer/commit/4d1b4bb6afc02e6f849536a8571c21579e473959)
-- remove visGeo from selection interface [`a7ac39c`](https://github.com/simularium/simularium-viewer/commit/a7ac39c54905767821867cd5825071db16c10a93)
-- seperate out creating materials and adding colors [`0f4b2ee`](https://github.com/simularium/simularium-viewer/commit/0f4b2eeeedf47f16ab81d2afb19609c45667a091)
+-   use default props for default colors, plus update interface [`#205`](https://github.com/simularium/simularium-viewer/pull/205)
+-   Feature/user colors [`#204`](https://github.com/simularium/simularium-viewer/pull/204)
+-   move setAgentColors to selection interface for testablity [`4d1b4bb`](https://github.com/simularium/simularium-viewer/commit/4d1b4bb6afc02e6f849536a8571c21579e473959)
+-   remove visGeo from selection interface [`a7ac39c`](https://github.com/simularium/simularium-viewer/commit/a7ac39c54905767821867cd5825071db16c10a93)
+-   seperate out creating materials and adding colors [`0f4b2ee`](https://github.com/simularium/simularium-viewer/commit/0f4b2eeeedf47f16ab81d2afb19609c45667a091)
 
 #### [v3.0.1](https://github.com/simularium/simularium-viewer/compare/v3.0.0...v3.0.1)
 
 > 12 October 2021
 
-- Feature/instanced pdb [`#198`](https://github.com/simularium/simularium-viewer/pull/198)
-- Feature/user colors [`#196`](https://github.com/simularium/simularium-viewer/pull/196)
-- move visgeometry-associated files inside of visgeometry [`#194`](https://github.com/simularium/simularium-viewer/pull/194)
-- Feature/move visgeo file [`#193`](https://github.com/simularium/simularium-viewer/pull/193)
-- mostly working [`3eb7916`](https://github.com/simularium/simularium-viewer/commit/3eb79166abdc1e7fa73c42ef7bc47ec00c5db708)
-- move client simulator implementations outside of main library code [`d3a2904`](https://github.com/simularium/simularium-viewer/commit/d3a2904d866bac0cddd1c5e2f8ee6027a8d236e3)
-- use user defined color [`b399af8`](https://github.com/simularium/simularium-viewer/commit/b399af843e7996fedfd90fa9312415a580fe494e)
+-   Feature/instanced pdb [`#198`](https://github.com/simularium/simularium-viewer/pull/198)
+-   Feature/user colors [`#196`](https://github.com/simularium/simularium-viewer/pull/196)
+-   move visgeometry-associated files inside of visgeometry [`#194`](https://github.com/simularium/simularium-viewer/pull/194)
+-   Feature/move visgeo file [`#193`](https://github.com/simularium/simularium-viewer/pull/193)
+-   mostly working [`3eb7916`](https://github.com/simularium/simularium-viewer/commit/3eb79166abdc1e7fa73c42ef7bc47ec00c5db708)
+-   move client simulator implementations outside of main library code [`d3a2904`](https://github.com/simularium/simularium-viewer/commit/d3a2904d866bac0cddd1c5e2f8ee6027a8d236e3)
+-   use user defined color [`b399af8`](https://github.com/simularium/simularium-viewer/commit/b399af843e7996fedfd90fa9312415a580fe494e)
 
 ### [v3.0.0](https://github.com/simularium/simularium-viewer/compare/v2.9.8...v3.0.0)
 
 > 27 September 2021
 
-- Feature/geometry store [`#185`](https://github.com/simularium/simularium-viewer/pull/185)
-- update dependencies [`#168`](https://github.com/simularium/simularium-viewer/pull/168)
-- Feature/warn if server connection is invalid [`#183`](https://github.com/simularium/simularium-viewer/pull/183)
-- Feature/local custom geo [`#182`](https://github.com/simularium/simularium-viewer/pull/182)
-- cleanup, use hardcoded strings less [`#184`](https://github.com/simularium/simularium-viewer/pull/184)
-- Feature/custom geo [`#174`](https://github.com/simularium/simularium-viewer/pull/174)
-- Fix/clear out pdb [`#180`](https://github.com/simularium/simularium-viewer/pull/180)
-- mucking about with jest config [`d3a7664`](https://github.com/simularium/simularium-viewer/commit/d3a7664e0cd85313cfc09c8b20a007eb25b23a50)
-- more dep updates [`382c715`](https://github.com/simularium/simularium-viewer/commit/382c7151f8c6a7a5c7e514dbaef5ac921c62a932)
-- tests passing! [`70984b5`](https://github.com/simularium/simularium-viewer/commit/70984b5cecb68ce17f431066813cc20178c8d954)
+-   Feature/geometry store [`#185`](https://github.com/simularium/simularium-viewer/pull/185)
+-   update dependencies [`#168`](https://github.com/simularium/simularium-viewer/pull/168)
+-   Feature/warn if server connection is invalid [`#183`](https://github.com/simularium/simularium-viewer/pull/183)
+-   Feature/local custom geo [`#182`](https://github.com/simularium/simularium-viewer/pull/182)
+-   cleanup, use hardcoded strings less [`#184`](https://github.com/simularium/simularium-viewer/pull/184)
+-   Feature/custom geo [`#174`](https://github.com/simularium/simularium-viewer/pull/174)
+-   Fix/clear out pdb [`#180`](https://github.com/simularium/simularium-viewer/pull/180)
+-   mucking about with jest config [`d3a7664`](https://github.com/simularium/simularium-viewer/commit/d3a7664e0cd85313cfc09c8b20a007eb25b23a50)
+-   more dep updates [`382c715`](https://github.com/simularium/simularium-viewer/commit/382c7151f8c6a7a5c7e514dbaef5ac921c62a932)
+-   tests passing! [`70984b5`](https://github.com/simularium/simularium-viewer/commit/70984b5cecb68ce17f431066813cc20178c8d954)
 
 #### [v2.9.8](https://github.com/simularium/simularium-viewer/compare/v2.9.7...v2.9.8)
 
 > 25 August 2021
 
-- Fix/camera controls break in simularium-website [`#178`](https://github.com/simularium/simularium-viewer/pull/178)
-- Feature/multiple render targets [`#175`](https://github.com/simularium/simularium-viewer/pull/175)
-- Fix/warn if waiting too long to connect to server [`#173`](https://github.com/simularium/simularium-viewer/pull/173)
-- fix #170 [`#172`](https://github.com/simularium/simularium-viewer/pull/172)
-- use auto-changelog [`#167`](https://github.com/simularium/simularium-viewer/pull/167)
-- fix bug during trajectory changes [`#164`](https://github.com/simularium/simularium-viewer/pull/164)
-- Find and replace master with main [`#139`](https://github.com/simularium/simularium-viewer/pull/139)
-- add github action to show testing coverage [`#138`](https://github.com/simularium/simularium-viewer/pull/138)
-- Feature/remove dup camera function code [`#136`](https://github.com/simularium/simularium-viewer/pull/136)
-- Merge pull request #172 from allen-cell-animated/bugfix/linear-curve-on-axis [`#170`](https://github.com/simularium/simularium-viewer/issues/170)
-- fix react dependency and update package.json [`e123be6`](https://github.com/simularium/simularium-viewer/commit/e123be6c784f006949e22e186e0a6bc86b5c0620)
-- redo package-lock [`66f5990`](https://github.com/simularium/simularium-viewer/commit/66f59901fc2f690d551e3b566ed37b118c4cea82)
-- bump threejs version to get performance bug fix [`ebe9315`](https://github.com/simularium/simularium-viewer/commit/ebe9315618671d2d01150114e0b19cd87f833b6d)
+-   Fix/camera controls break in simularium-website [`#178`](https://github.com/simularium/simularium-viewer/pull/178)
+-   Feature/multiple render targets [`#175`](https://github.com/simularium/simularium-viewer/pull/175)
+-   Fix/warn if waiting too long to connect to server [`#173`](https://github.com/simularium/simularium-viewer/pull/173)
+-   fix #170 [`#172`](https://github.com/simularium/simularium-viewer/pull/172)
+-   use auto-changelog [`#167`](https://github.com/simularium/simularium-viewer/pull/167)
+-   fix bug during trajectory changes [`#164`](https://github.com/simularium/simularium-viewer/pull/164)
+-   Find and replace master with main [`#139`](https://github.com/simularium/simularium-viewer/pull/139)
+-   add github action to show testing coverage [`#138`](https://github.com/simularium/simularium-viewer/pull/138)
+-   Feature/remove dup camera function code [`#136`](https://github.com/simularium/simularium-viewer/pull/136)
+-   Merge pull request #172 from allen-cell-animated/bugfix/linear-curve-on-axis [`#170`](https://github.com/simularium/simularium-viewer/issues/170)
+-   fix react dependency and update package.json [`e123be6`](https://github.com/simularium/simularium-viewer/commit/e123be6c784f006949e22e186e0a6bc86b5c0620)
+-   redo package-lock [`66f5990`](https://github.com/simularium/simularium-viewer/commit/66f59901fc2f690d551e3b566ed37b118c4cea82)
+-   bump threejs version to get performance bug fix [`ebe9315`](https://github.com/simularium/simularium-viewer/commit/ebe9315618671d2d01150114e0b19cd87f833b6d)
 
 #### [v2.9.7](https://github.com/simularium/simularium-viewer/compare/v2.9.6...v2.9.7)
 
 > 2 July 2021
 
-- Replace timeNs with time [`#133`](https://github.com/simularium/simularium-viewer/pull/133)
-- Fix/zoom while pan [`#135`](https://github.com/simularium/simularium-viewer/pull/135)
-- combine zoom functions into one dolly function [`f9bdb05`](https://github.com/simularium/simularium-viewer/commit/f9bdb052f7f78d97c4ef909074a3ff09b1702978)
-- zoom in and out work in pan mode [`ef0b6d3`](https://github.com/simularium/simularium-viewer/commit/ef0b6d358b9c4666a03a1290022db8fab8a38d68)
+-   Replace timeNs with time [`#133`](https://github.com/simularium/simularium-viewer/pull/133)
+-   Fix/zoom while pan [`#135`](https://github.com/simularium/simularium-viewer/pull/135)
+-   combine zoom functions into one dolly function [`f9bdb05`](https://github.com/simularium/simularium-viewer/commit/f9bdb052f7f78d97c4ef909074a3ff09b1702978)
+-   zoom in and out work in pan mode [`ef0b6d3`](https://github.com/simularium/simularium-viewer/commit/ef0b6d358b9c4666a03a1290022db8fab8a38d68)
 
 #### [v2.9.6](https://github.com/simularium/simularium-viewer/compare/v2.9.5...v2.9.6)
 
 > 1 July 2021
 
-- Fix/skip frame bugs (temporary fix) [`#131`](https://github.com/simularium/simularium-viewer/pull/131)
-- Attach Bug label to issue by default when Bug Report template is used [`aec5c4d`](https://github.com/simularium/simularium-viewer/commit/aec5c4d5ab0f3490b3b524c3b42e12a0f013080b)
-- Use bullets instead of checkboxes in PR template [`0b57ce2`](https://github.com/simularium/simularium-viewer/commit/0b57ce2f36c797d6b40c2e6950242a4851ec2394)
+-   Fix/skip frame bugs (temporary fix) [`#131`](https://github.com/simularium/simularium-viewer/pull/131)
+-   Attach Bug label to issue by default when Bug Report template is used [`aec5c4d`](https://github.com/simularium/simularium-viewer/commit/aec5c4d5ab0f3490b3b524c3b42e12a0f013080b)
+-   Use bullets instead of checkboxes in PR template [`0b57ce2`](https://github.com/simularium/simularium-viewer/commit/0b57ce2f36c797d6b40c2e6950242a4851ec2394)
 
 #### [v2.9.5](https://github.com/simularium/simularium-viewer/compare/v2.9.4...v2.9.5)
 
 > 29 June 2021
 
-- Fix/file switching bugs [`#128`](https://github.com/simularium/simularium-viewer/pull/128)
+-   Fix/file switching bugs [`#128`](https://github.com/simularium/simularium-viewer/pull/128)
 
 #### [v2.9.4](https://github.com/simularium/simularium-viewer/compare/v2.9.3...v2.9.4)
 
 > 17 June 2021
 
-- Feature/focus mode [`#118`](https://github.com/simularium/simularium-viewer/pull/118)
-- Feature/mesh instancing [`#112`](https://github.com/simularium/simularium-viewer/pull/112)
-- allow command or shift to be the key modifier for pan/rotate [`#119`](https://github.com/simularium/simularium-viewer/pull/119)
-- Fix/bugs in testbed slider [`#117`](https://github.com/simularium/simularium-viewer/pull/117)
-- add a function to switch between left-mouse pan or left-mouse rotate [`#116`](https://github.com/simularium/simularium-viewer/pull/116)
-- splitting apart the webgl1 renderer from the main webgl2 renderer; wip, not working at all yet [`73877e2`](https://github.com/simularium/simularium-viewer/commit/73877e2ba1b8fc9363fe05f9bc90823a8a43b0d3)
-- remove special case membrane shaders and animation updates [`4d88dce`](https://github.com/simularium/simularium-viewer/commit/4d88dce6e565df6cca7a9b108261d9a4004bafed)
-- initial add of InstancedMesh implementation [`79410f5`](https://github.com/simularium/simularium-viewer/commit/79410f5742e36e220744db5e180fd2b5eb5751c9)
+-   Feature/focus mode [`#118`](https://github.com/simularium/simularium-viewer/pull/118)
+-   Feature/mesh instancing [`#112`](https://github.com/simularium/simularium-viewer/pull/112)
+-   allow command or shift to be the key modifier for pan/rotate [`#119`](https://github.com/simularium/simularium-viewer/pull/119)
+-   Fix/bugs in testbed slider [`#117`](https://github.com/simularium/simularium-viewer/pull/117)
+-   add a function to switch between left-mouse pan or left-mouse rotate [`#116`](https://github.com/simularium/simularium-viewer/pull/116)
+-   splitting apart the webgl1 renderer from the main webgl2 renderer; wip, not working at all yet [`73877e2`](https://github.com/simularium/simularium-viewer/commit/73877e2ba1b8fc9363fe05f9bc90823a8a43b0d3)
+-   remove special case membrane shaders and animation updates [`4d88dce`](https://github.com/simularium/simularium-viewer/commit/4d88dce6e565df6cca7a9b108261d9a4004bafed)
+-   initial add of InstancedMesh implementation [`79410f5`](https://github.com/simularium/simularium-viewer/commit/79410f5742e36e220744db5e180fd2b5eb5751c9)
 
 #### [v2.9.3](https://github.com/simularium/simularium-viewer/compare/v2.9.2...v2.9.3)
 
 > 1 June 2021
 
-- Fix/local playback bugs [`#115`](https://github.com/simularium/simularium-viewer/pull/115)
+-   Fix/local playback bugs [`#115`](https://github.com/simularium/simularium-viewer/pull/115)
 
 #### [v2.9.2](https://github.com/simularium/simularium-viewer/compare/v2.9.1...v2.9.2)
 
 > 26 May 2021
 
-- Fix/playback not resuming after skipping to a point in time [`#114`](https://github.com/simularium/simularium-viewer/pull/114)
+-   Fix/playback not resuming after skipping to a point in time [`#114`](https://github.com/simularium/simularium-viewer/pull/114)
 
 #### [v2.9.1](https://github.com/simularium/simularium-viewer/compare/v2.9.0...v2.9.1)
 
 > 25 May 2021
 
-- Fix/floating point time errors [`#113`](https://github.com/simularium/simularium-viewer/pull/113)
+-   Fix/floating point time errors [`#113`](https://github.com/simularium/simularium-viewer/pull/113)
 
 #### [v2.9.0](https://github.com/simularium/simularium-viewer/compare/v2.8.1...v2.9.0)
 
 > 17 May 2021
 
-- Feature/implement user-set camera transform [`#111`](https://github.com/simularium/simularium-viewer/pull/111)
+-   Feature/implement user-set camera transform [`#111`](https://github.com/simularium/simularium-viewer/pull/111)
 
 #### [v2.8.1](https://github.com/simularium/simularium-viewer/compare/v2.8.0...v2.8.1)
 
 > 14 May 2021
 
-- bugfix/frame-info-parsing [`#110`](https://github.com/simularium/simularium-viewer/pull/110)
-- correct spacing (lint) [`4faa250`](https://github.com/simularium/simularium-viewer/commit/4faa250b290c13969988a46408572480850a6764)
-- correct frame info parsing [`81152c5`](https://github.com/simularium/simularium-viewer/commit/81152c579e68b1f9a1d53d8539d30964991bae57)
+-   bugfix/frame-info-parsing [`#110`](https://github.com/simularium/simularium-viewer/pull/110)
+-   correct spacing (lint) [`4faa250`](https://github.com/simularium/simularium-viewer/commit/4faa250b290c13969988a46408572480850a6764)
+-   correct frame info parsing [`81152c5`](https://github.com/simularium/simularium-viewer/commit/81152c579e68b1f9a1d53d8539d30964991bae57)
 
 #### [v2.8.0](https://github.com/simularium/simularium-viewer/compare/v2.7.4...v2.8.0)
 
 > 10 May 2021
 
-- Bump postcss from 7.0.35 to 8.2.10 [`#109`](https://github.com/simularium/simularium-viewer/pull/109)
-- Feature/procedural js simulation [`#102`](https://github.com/simularium/simularium-viewer/pull/102)
-- Fix/update lint-staged and copy-webpack-plugin [`#108`](https://github.com/simularium/simularium-viewer/pull/108)
-- Fix/debug and enhance test viewer [`#107`](https://github.com/simularium/simularium-viewer/pull/107)
-- start to abstract out the local client simulators so there can be many flavors [`383497e`](https://github.com/simularium/simularium-viewer/commit/383497e270b3793d648fd3a0818af1b34805ede0)
-- refactor local drag and drop files into a LocalFileConnection class [`6a09663`](https://github.com/simularium/simularium-viewer/commit/6a096638ae91235d3e49dc55ced936a5b2adc596)
-- wip on a locally runnable simulator (synchronous at first) [`c4fd4c5`](https://github.com/simularium/simularium-viewer/commit/c4fd4c52adc4451a77226b0c2b7e2748b363de52)
+-   Bump postcss from 7.0.35 to 8.2.10 [`#109`](https://github.com/simularium/simularium-viewer/pull/109)
+-   Feature/procedural js simulation [`#102`](https://github.com/simularium/simularium-viewer/pull/102)
+-   Fix/update lint-staged and copy-webpack-plugin [`#108`](https://github.com/simularium/simularium-viewer/pull/108)
+-   Fix/debug and enhance test viewer [`#107`](https://github.com/simularium/simularium-viewer/pull/107)
+-   start to abstract out the local client simulators so there can be many flavors [`383497e`](https://github.com/simularium/simularium-viewer/commit/383497e270b3793d648fd3a0818af1b34805ede0)
+-   refactor local drag and drop files into a LocalFileConnection class [`6a09663`](https://github.com/simularium/simularium-viewer/commit/6a096638ae91235d3e49dc55ced936a5b2adc596)
+-   wip on a locally runnable simulator (synchronous at first) [`c4fd4c5`](https://github.com/simularium/simularium-viewer/commit/c4fd4c52adc4451a77226b0c2b7e2748b363de52)
 
 #### [v2.7.4](https://github.com/simularium/simularium-viewer/compare/v2.7.3...v2.7.4)
 
 > 30 April 2021
 
-- Fix/ Can't step to last frame [`#106`](https://github.com/simularium/simularium-viewer/pull/106)
-- Fix/use import instead of require in versionHandlers.ts [`#105`](https://github.com/simularium/simularium-viewer/pull/105)
+-   Fix/ Can't step to last frame [`#106`](https://github.com/simularium/simularium-viewer/pull/106)
+-   Fix/use import instead of require in versionHandlers.ts [`#105`](https://github.com/simularium/simularium-viewer/pull/105)
 
 #### [v2.7.3](https://github.com/simularium/simularium-viewer/compare/v2.7.2...v2.7.3)
 
 > 28 April 2021
 
-- Fix/ convert spatialUnits correctly in updateTrajectoryFileInfoFormat [`#104`](https://github.com/simularium/simularium-viewer/pull/104)
-- Update CONTRIBUTING.md [`12d4efd`](https://github.com/simularium/simularium-viewer/commit/12d4efd79df8884e38fd2ac324729da3695113d7)
+-   Fix/ convert spatialUnits correctly in updateTrajectoryFileInfoFormat [`#104`](https://github.com/simularium/simularium-viewer/pull/104)
+-   Update CONTRIBUTING.md [`12d4efd`](https://github.com/simularium/simularium-viewer/commit/12d4efd79df8884e38fd2ac324729da3695113d7)
 
 #### [v2.7.2](https://github.com/simularium/simularium-viewer/compare/v2.7.1...v2.7.2)
 
 > 20 April 2021
 
-- bugfix/correct-binary-pre-parse-caching [`#101`](https://github.com/simularium/simularium-viewer/pull/101)
-- bugfix/yellow-agents [`#98`](https://github.com/simularium/simularium-viewer/pull/98)
-- Feature/faster fibers [`#99`](https://github.com/simularium/simularium-viewer/pull/99)
-- bunch of refactoring; get length-3 curves to draw something at least [`2c0e812`](https://github.com/simularium/simularium-viewer/commit/2c0e812534da24eeb547aa0dbd71276d478faaf3)
-- remove dead code, and lint [`10fc64b`](https://github.com/simularium/simularium-viewer/commit/10fc64b4f9fbeaf40c6db8a03fa4f334f05fa9e0)
-- begin porting the big shader [`0eab5e7`](https://github.com/simularium/simularium-viewer/commit/0eab5e7783c9ab5deabb2a25b68bba976056e3b5)
+-   bugfix/correct-binary-pre-parse-caching [`#101`](https://github.com/simularium/simularium-viewer/pull/101)
+-   bugfix/yellow-agents [`#98`](https://github.com/simularium/simularium-viewer/pull/98)
+-   Feature/faster fibers [`#99`](https://github.com/simularium/simularium-viewer/pull/99)
+-   bunch of refactoring; get length-3 curves to draw something at least [`2c0e812`](https://github.com/simularium/simularium-viewer/commit/2c0e812534da24eeb547aa0dbd71276d478faaf3)
+-   remove dead code, and lint [`10fc64b`](https://github.com/simularium/simularium-viewer/commit/10fc64b4f9fbeaf40c6db8a03fa4f334f05fa9e0)
+-   begin porting the big shader [`0eab5e7`](https://github.com/simularium/simularium-viewer/commit/0eab5e7783c9ab5deabb2a25b68bba976056e3b5)
 
 #### [v2.7.1](https://github.com/simularium/simularium-viewer/compare/v2.7.0...v2.7.1)
 
 > 15 April 2021
 
-- Feature/rename TrajectoryFileInfoV2 interface as TrajectoryFileInfo [`#100`](https://github.com/simularium/simularium-viewer/pull/100)
+-   Feature/rename TrajectoryFileInfoV2 interface as TrajectoryFileInfo [`#100`](https://github.com/simularium/simularium-viewer/pull/100)
 
 #### [v2.7.0](https://github.com/simularium/simularium-viewer/compare/v2.6.2...v2.7.0)
 
@@ -475,294 +475,294 @@ Generated by [`auto-changelog`](https://github.com/CookPete/auto-changelog).
 
 > 6 April 2021
 
-- Feature/convert TrajectoryFileInfo to latest version [`#97`](https://github.com/simularium/simularium-viewer/pull/97)
-- Feature/arraybuffer-broadcast-decode [`#83`](https://github.com/simularium/simularium-viewer/pull/83)
-- allow for a file name to be passed via url query string [`#96`](https://github.com/simularium/simularium-viewer/pull/96)
-- iterate binary frames correctly [`2162593`](https://github.com/simularium/simularium-viewer/commit/2162593eb8c59e69e456909871eeb651c216dff2)
-- initial array-buffer parsing impl [`ce2c49a`](https://github.com/simularium/simularium-viewer/commit/ce2c49adc15769d80aca40c64c947396ed14322d)
-- streaming decoding (w/ some bugs) [`3a9a116`](https://github.com/simularium/simularium-viewer/commit/3a9a1164de0be350e9d24adf758107841815271c)
+-   Feature/convert TrajectoryFileInfo to latest version [`#97`](https://github.com/simularium/simularium-viewer/pull/97)
+-   Feature/arraybuffer-broadcast-decode [`#83`](https://github.com/simularium/simularium-viewer/pull/83)
+-   allow for a file name to be passed via url query string [`#96`](https://github.com/simularium/simularium-viewer/pull/96)
+-   iterate binary frames correctly [`2162593`](https://github.com/simularium/simularium-viewer/commit/2162593eb8c59e69e456909871eeb651c216dff2)
+-   initial array-buffer parsing impl [`ce2c49a`](https://github.com/simularium/simularium-viewer/commit/ce2c49adc15769d80aca40c64c947396ed14322d)
+-   streaming decoding (w/ some bugs) [`3a9a116`](https://github.com/simularium/simularium-viewer/commit/3a9a1164de0be350e9d24adf758107841815271c)
 
 #### [v2.6.1](https://github.com/simularium/simularium-viewer/compare/v2.6.0...v2.6.1)
 
 > 16 March 2021
 
-- Fix/export TrajectoryFileInfoV1 and TrajectoryFileInfoV2 interfaces [`#95`](https://github.com/simularium/simularium-viewer/pull/95)
+-   Fix/export TrajectoryFileInfoV1 and TrajectoryFileInfoV2 interfaces [`#95`](https://github.com/simularium/simularium-viewer/pull/95)
 
 #### [v2.6.0](https://github.com/simularium/simularium-viewer/compare/v2.5.3...v2.6.0)
 
 > 11 March 2021
 
-- Feature/update TrajectoryFileInfo interface to support v2 data format [`#94`](https://github.com/simularium/simularium-viewer/pull/94)
-- fix webgl shader compiler warnings  [`#93`](https://github.com/simularium/simularium-viewer/pull/93)
-- Fix/windows instancing fiber ends [`#92`](https://github.com/simularium/simularium-viewer/pull/92)
-- wip toward debugging instancing issue on windows [`8727a08`](https://github.com/simularium/simularium-viewer/commit/8727a08826327132346e4ea3981e6f1d2dc64922)
-- fix warnings about variables from vertex shader not read by fragment shader [`509be8d`](https://github.com/simularium/simularium-viewer/commit/509be8da34a6ee9f99416ce62bf19c6c6d79b672)
-- bring proper colors back [`1a33c75`](https://github.com/simularium/simularium-viewer/commit/1a33c75c9717237ee4f065a10555ce480e264a5b)
+-   Feature/update TrajectoryFileInfo interface to support v2 data format [`#94`](https://github.com/simularium/simularium-viewer/pull/94)
+-   fix webgl shader compiler warnings [`#93`](https://github.com/simularium/simularium-viewer/pull/93)
+-   Fix/windows instancing fiber ends [`#92`](https://github.com/simularium/simularium-viewer/pull/92)
+-   wip toward debugging instancing issue on windows [`8727a08`](https://github.com/simularium/simularium-viewer/commit/8727a08826327132346e4ea3981e6f1d2dc64922)
+-   fix warnings about variables from vertex shader not read by fragment shader [`509be8d`](https://github.com/simularium/simularium-viewer/commit/509be8da34a6ee9f99416ce62bf19c6c6d79b672)
+-   bring proper colors back [`1a33c75`](https://github.com/simularium/simularium-viewer/commit/1a33c75c9717237ee4f065a10555ce480e264a5b)
 
 #### [v2.5.3](https://github.com/simularium/simularium-viewer/compare/v2.5.2...v2.5.3)
 
 > 17 December 2020
 
-- clear visData out on creation [`#90`](https://github.com/simularium/simularium-viewer/pull/90)
-- clear the viewport when all agents are removed [`#89`](https://github.com/simularium/simularium-viewer/pull/89)
-- reset fiber endcaps more robustly [`#88`](https://github.com/simularium/simularium-viewer/pull/88)
-- Feature/use agent instance map [`#85`](https://github.com/simularium/simularium-viewer/pull/85)
-- Fix/remove endcaps [`#87`](https://github.com/simularium/simularium-viewer/pull/87)
-- admin/update readme [`#86`](https://github.com/simularium/simularium-viewer/pull/86)
-- have net-conn save last requested file [`#84`](https://github.com/simularium/simularium-viewer/pull/84)
-- bugfix/playback-looping-incorrectly [`#82`](https://github.com/simularium/simularium-viewer/pull/82)
-- fix bug with highlighting of fibers [`#81`](https://github.com/simularium/simularium-viewer/pull/81)
-- add links to other repos on readme, move dev and deploy instructions to contributing [`3d53efd`](https://github.com/simularium/simularium-viewer/commit/3d53efd4a6ad25b8ad4f0e69a248781d30a5e402)
-- create agents dynamically [`a046cc4`](https://github.com/simularium/simularium-viewer/commit/a046cc4d676aa833cf0a932e752881bc898bd057)
-- hide all agents on each update and only show the agents present in the update list [`b169fd2`](https://github.com/simularium/simularium-viewer/commit/b169fd2a69d02a4f179875dcbf7bc80dcd83a5c1)
+-   clear visData out on creation [`#90`](https://github.com/simularium/simularium-viewer/pull/90)
+-   clear the viewport when all agents are removed [`#89`](https://github.com/simularium/simularium-viewer/pull/89)
+-   reset fiber endcaps more robustly [`#88`](https://github.com/simularium/simularium-viewer/pull/88)
+-   Feature/use agent instance map [`#85`](https://github.com/simularium/simularium-viewer/pull/85)
+-   Fix/remove endcaps [`#87`](https://github.com/simularium/simularium-viewer/pull/87)
+-   admin/update readme [`#86`](https://github.com/simularium/simularium-viewer/pull/86)
+-   have net-conn save last requested file [`#84`](https://github.com/simularium/simularium-viewer/pull/84)
+-   bugfix/playback-looping-incorrectly [`#82`](https://github.com/simularium/simularium-viewer/pull/82)
+-   fix bug with highlighting of fibers [`#81`](https://github.com/simularium/simularium-viewer/pull/81)
+-   add links to other repos on readme, move dev and deploy instructions to contributing [`3d53efd`](https://github.com/simularium/simularium-viewer/commit/3d53efd4a6ad25b8ad4f0e69a248781d30a5e402)
+-   create agents dynamically [`a046cc4`](https://github.com/simularium/simularium-viewer/commit/a046cc4d676aa833cf0a932e752881bc898bd057)
+-   hide all agents on each update and only show the agents present in the update list [`b169fd2`](https://github.com/simularium/simularium-viewer/commit/b169fd2a69d02a4f179875dcbf7bc80dcd83a5c1)
 
 #### [v2.5.2](https://github.com/simularium/simularium-viewer/compare/v2.5.1...v2.5.2)
 
 > 9 December 2020
 
-- Fix/network loading issue [`#79`](https://github.com/simularium/simularium-viewer/pull/79)
-- made a clear file function [`#80`](https://github.com/simularium/simularium-viewer/pull/80)
-- factored out timeout function [`2a4dc44`](https://github.com/simularium/simularium-viewer/commit/2a4dc448332112626186cf71536dd839ce3f258b)
-- wait another second if fails connection first time [`e542b95`](https://github.com/simularium/simularium-viewer/commit/e542b95ad687c7aad82d08f703ebd0451dfd990f)
-- will try to reconnect once [`beca8c6`](https://github.com/simularium/simularium-viewer/commit/beca8c6950f890f8a75b48e270780f02208f7d27)
+-   Fix/network loading issue [`#79`](https://github.com/simularium/simularium-viewer/pull/79)
+-   made a clear file function [`#80`](https://github.com/simularium/simularium-viewer/pull/80)
+-   factored out timeout function [`2a4dc44`](https://github.com/simularium/simularium-viewer/commit/2a4dc448332112626186cf71536dd839ce3f258b)
+-   wait another second if fails connection first time [`e542b95`](https://github.com/simularium/simularium-viewer/commit/e542b95ad687c7aad82d08f703ebd0451dfd990f)
+-   will try to reconnect once [`beca8c6`](https://github.com/simularium/simularium-viewer/commit/beca8c6950f890f8a75b48e270780f02208f7d27)
 
 #### [v2.5.1](https://github.com/simularium/simularium-viewer/compare/v2.5.0...v2.5.1)
 
 > 9 December 2020
 
-- Feature/add spatialUnitFactorMeters to TrajectoryFileInfo interface [`#76`](https://github.com/simularium/simularium-viewer/pull/76)
-- Fix/network loading issue [`#78`](https://github.com/simularium/simularium-viewer/pull/78)
-- make sure any resize calls don't use zero height or width [`#77`](https://github.com/simularium/simularium-viewer/pull/77)
-- Fix "hidden agents reappear on play" [`#74`](https://github.com/simularium/simularium-viewer/pull/74)
-- process visibility and highlight updates in updateScene so that all agents can be accounted for at later times [`b534677`](https://github.com/simularium/simularium-viewer/commit/b5346777e2681aa1da622539b134afdd717a0c58)
-- changing example app to act more like website [`755e24a`](https://github.com/simularium/simularium-viewer/commit/755e24ad4745635d5658b446304bc7e746c75343)
-- return error obj instead of string from netconnect [`3a9f5f3`](https://github.com/simularium/simularium-viewer/commit/3a9f5f343fd7f46dc80709f5b97ee169a3dfb41b)
+-   Feature/add spatialUnitFactorMeters to TrajectoryFileInfo interface [`#76`](https://github.com/simularium/simularium-viewer/pull/76)
+-   Fix/network loading issue [`#78`](https://github.com/simularium/simularium-viewer/pull/78)
+-   make sure any resize calls don't use zero height or width [`#77`](https://github.com/simularium/simularium-viewer/pull/77)
+-   Fix "hidden agents reappear on play" [`#74`](https://github.com/simularium/simularium-viewer/pull/74)
+-   process visibility and highlight updates in updateScene so that all agents can be accounted for at later times [`b534677`](https://github.com/simularium/simularium-viewer/commit/b5346777e2681aa1da622539b134afdd717a0c58)
+-   changing example app to act more like website [`755e24a`](https://github.com/simularium/simularium-viewer/commit/755e24ad4745635d5658b446304bc7e746c75343)
+-   return error obj instead of string from netconnect [`3a9f5f3`](https://github.com/simularium/simularium-viewer/commit/3a9f5f343fd7f46dc80709f5b97ee169a3dfb41b)
 
 #### [v2.5.0](https://github.com/simularium/simularium-viewer/compare/v2.4.9...v2.5.0)
 
 > 4 December 2020
 
-- Feature/add-bounding-box-tick-marks [`#75`](https://github.com/simularium/simularium-viewer/pull/75)
-- fix bug with webgl1 when webgl2 is not available [`#73`](https://github.com/simularium/simularium-viewer/pull/73)
-- fix bug with webgl1 when webgl2 is not available, and keep state consistent at init [`7b0a282`](https://github.com/simularium/simularium-viewer/commit/7b0a2828c126293ec87fa6c497a5a963ceb27bc5)
+-   Feature/add-bounding-box-tick-marks [`#75`](https://github.com/simularium/simularium-viewer/pull/75)
+-   fix bug with webgl1 when webgl2 is not available [`#73`](https://github.com/simularium/simularium-viewer/pull/73)
+-   fix bug with webgl1 when webgl2 is not available, and keep state consistent at init [`7b0a282`](https://github.com/simularium/simularium-viewer/commit/7b0a2828c126293ec87fa6c497a5a963ceb27bc5)
 
 #### [v2.4.9](https://github.com/simularium/simularium-viewer/compare/v2.4.8...v2.4.9)
 
 > 25 November 2020
 
-- more depth cueing [`#71`](https://github.com/simularium/simularium-viewer/pull/71)
-- Feature/color-adjustment [`#72`](https://github.com/simularium/simularium-viewer/pull/72)
-- Fix/path drawing order [`#69`](https://github.com/simularium/simularium-viewer/pull/69)
-- try to find correct previous position for path segment drawing [`5cc98e0`](https://github.com/simularium/simularium-viewer/commit/5cc98e0a47b9fad80e1772b7cd2d8845a76abff4)
-- update agentColors [`42b69d7`](https://github.com/simularium/simularium-viewer/commit/42b69d7a811067ce34f800c3dcf6013d055d6bc7)
-- only look up prior instance if we are doing path drawing and really need it [`0bf682b`](https://github.com/simularium/simularium-viewer/commit/0bf682b531e6e695c9f35cab70855180ce1b529c)
+-   more depth cueing [`#71`](https://github.com/simularium/simularium-viewer/pull/71)
+-   Feature/color-adjustment [`#72`](https://github.com/simularium/simularium-viewer/pull/72)
+-   Fix/path drawing order [`#69`](https://github.com/simularium/simularium-viewer/pull/69)
+-   try to find correct previous position for path segment drawing [`5cc98e0`](https://github.com/simularium/simularium-viewer/commit/5cc98e0a47b9fad80e1772b7cd2d8845a76abff4)
+-   update agentColors [`42b69d7`](https://github.com/simularium/simularium-viewer/commit/42b69d7a811067ce34f800c3dcf6013d055d6bc7)
+-   only look up prior instance if we are doing path drawing and really need it [`0bf682b`](https://github.com/simularium/simularium-viewer/commit/0bf682b531e6e695c9f35cab70855180ce1b529c)
 
 #### [v2.4.8](https://github.com/simularium/simularium-viewer/compare/v2.4.7...v2.4.8)
 
 > 23 November 2020
 
-- Feature/hover pointer [`#70`](https://github.com/simularium/simularium-viewer/pull/70)
-- added mousemove listener that changes cursor [`ad2ab15`](https://github.com/simularium/simularium-viewer/commit/ad2ab1532cf3dea7bb0fc990f31cd25ada4dfdc6)
-- return early if not mounted [`7c9e76b`](https://github.com/simularium/simularium-viewer/commit/7c9e76b6e0c874e97dde081a680b5e7d52ea12df)
-- export TimeData interface [`152a4a4`](https://github.com/simularium/simularium-viewer/commit/152a4a4fdbbb3c5715e911b42c3417792cefa34e)
+-   Feature/hover pointer [`#70`](https://github.com/simularium/simularium-viewer/pull/70)
+-   added mousemove listener that changes cursor [`ad2ab15`](https://github.com/simularium/simularium-viewer/commit/ad2ab1532cf3dea7bb0fc990f31cd25ada4dfdc6)
+-   return early if not mounted [`7c9e76b`](https://github.com/simularium/simularium-viewer/commit/7c9e76b6e0c874e97dde081a680b5e7d52ea12df)
+-   export TimeData interface [`152a4a4`](https://github.com/simularium/simularium-viewer/commit/152a4a4fdbbb3c5715e911b42c3417792cefa34e)
 
 #### [v2.4.7](https://github.com/simularium/simularium-viewer/compare/v2.4.6...v2.4.7)
 
 > 9 November 2020
 
-- Feature/zoom functions [`#68`](https://github.com/simularium/simularium-viewer/pull/68)
-- Fix/default view [`#67`](https://github.com/simularium/simularium-viewer/pull/67)
-- remove some dead code from the shaders [`#66`](https://github.com/simularium/simularium-viewer/pull/66)
-- functions for setting values, changed some params [`5bfc0a8`](https://github.com/simularium/simularium-viewer/commit/5bfc0a8a1e89a4d8ecd4635a44219b0db7846bbe)
-- initialized render classes with parameters, functionalized changes [`0e135b4`](https://github.com/simularium/simularium-viewer/commit/0e135b40ac729cff5644d925c9160e609c2d598d)
-- added zoom in and zoom out functions [`6d8a95a`](https://github.com/simularium/simularium-viewer/commit/6d8a95ab94f959033907ad856765dff7ae334b2c)
+-   Feature/zoom functions [`#68`](https://github.com/simularium/simularium-viewer/pull/68)
+-   Fix/default view [`#67`](https://github.com/simularium/simularium-viewer/pull/67)
+-   remove some dead code from the shaders [`#66`](https://github.com/simularium/simularium-viewer/pull/66)
+-   functions for setting values, changed some params [`5bfc0a8`](https://github.com/simularium/simularium-viewer/commit/5bfc0a8a1e89a4d8ecd4635a44219b0db7846bbe)
+-   initialized render classes with parameters, functionalized changes [`0e135b4`](https://github.com/simularium/simularium-viewer/commit/0e135b40ac729cff5644d925c9160e609c2d598d)
+-   added zoom in and zoom out functions [`6d8a95a`](https://github.com/simularium/simularium-viewer/commit/6d8a95ab94f959033907ad856765dff7ae334b2c)
 
 #### [v2.4.6](https://github.com/simularium/simularium-viewer/compare/v2.4.5...v2.4.6)
 
 > 3 November 2020
 
-- Feature/optimize fiber updates [`#65`](https://github.com/simularium/simularium-viewer/pull/65)
-- refresh package-lock [`b2248e8`](https://github.com/simularium/simularium-viewer/commit/b2248e85ba734f92d0931f29bd9928814752d968)
-- wip pushes, not working code [`dd3cf6a`](https://github.com/simularium/simularium-viewer/commit/dd3cf6af5f762a41b68bb92d0d5f2c99b67377a9)
-- handle two different drawing strategies for fiber endcaps instancing [`abff352`](https://github.com/simularium/simularium-viewer/commit/abff3524c35a8e37e1bc50866f9ba4c6147cba69)
+-   Feature/optimize fiber updates [`#65`](https://github.com/simularium/simularium-viewer/pull/65)
+-   refresh package-lock [`b2248e8`](https://github.com/simularium/simularium-viewer/commit/b2248e85ba734f92d0931f29bd9928814752d968)
+-   wip pushes, not working code [`dd3cf6a`](https://github.com/simularium/simularium-viewer/commit/dd3cf6af5f762a41b68bb92d0d5f2c99b67377a9)
+-   handle two different drawing strategies for fiber endcaps instancing [`abff352`](https://github.com/simularium/simularium-viewer/commit/abff3524c35a8e37e1bc50866f9ba4c6147cba69)
 
 #### [v2.4.5](https://github.com/simularium/simularium-viewer/compare/v2.4.4...v2.4.5)
 
 > 20 October 2020
 
-- check for changes before doing expensive operation [`#64`](https://github.com/simularium/simularium-viewer/pull/64)
-- Fix/follow agent 0 [`#63`](https://github.com/simularium/simularium-viewer/pull/63)
-- Fix/init fade [`#62`](https://github.com/simularium/simularium-viewer/pull/62)
-- fix bug when following instance id 0 [`2e5bd05`](https://github.com/simularium/simularium-viewer/commit/2e5bd05829d191adf0adf80cbd7cf3283823117c)
-- match colors to front end ui [`12dee92`](https://github.com/simularium/simularium-viewer/commit/12dee92a0025da68bc54521a7b1171bb8ca723a7)
-- reduced gray fade [`1d40f33`](https://github.com/simularium/simularium-viewer/commit/1d40f336fb4148247af8d6484ce0b2994b41aaa1)
+-   check for changes before doing expensive operation [`#64`](https://github.com/simularium/simularium-viewer/pull/64)
+-   Fix/follow agent 0 [`#63`](https://github.com/simularium/simularium-viewer/pull/63)
+-   Fix/init fade [`#62`](https://github.com/simularium/simularium-viewer/pull/62)
+-   fix bug when following instance id 0 [`2e5bd05`](https://github.com/simularium/simularium-viewer/commit/2e5bd05829d191adf0adf80cbd7cf3283823117c)
+-   match colors to front end ui [`12dee92`](https://github.com/simularium/simularium-viewer/commit/12dee92a0025da68bc54521a7b1171bb8ca723a7)
+-   reduced gray fade [`1d40f33`](https://github.com/simularium/simularium-viewer/commit/1d40f336fb4148247af8d6484ce0b2994b41aaa1)
 
 #### [v2.4.4](https://github.com/simularium/simularium-viewer/compare/v2.4.3...v2.4.4)
 
 > 19 October 2020
 
-- Fix/highlight type 0 [`#60`](https://github.com/simularium/simularium-viewer/pull/60)
-- Fix/emit warning instead of 404 error when no geometry info [`#61`](https://github.com/simularium/simularium-viewer/pull/61)
-- add checkboxes for highlighting [`b65ec27`](https://github.com/simularium/simularium-viewer/commit/b65ec27c7b2e20c95d30d004861147fe24945208)
-- fix bug with highlighting when id is 0 [`9014685`](https://github.com/simularium/simularium-viewer/commit/9014685327057008c63b282c72abb0919ee98aaf)
-- fix bug where highlight removes agent instance outlines [`dfdc925`](https://github.com/simularium/simularium-viewer/commit/dfdc92508921efea3d8bc2e772e354305c5cdc3a)
+-   Fix/highlight type 0 [`#60`](https://github.com/simularium/simularium-viewer/pull/60)
+-   Fix/emit warning instead of 404 error when no geometry info [`#61`](https://github.com/simularium/simularium-viewer/pull/61)
+-   add checkboxes for highlighting [`b65ec27`](https://github.com/simularium/simularium-viewer/commit/b65ec27c7b2e20c95d30d004861147fe24945208)
+-   fix bug with highlighting when id is 0 [`9014685`](https://github.com/simularium/simularium-viewer/commit/9014685327057008c63b282c72abb0919ee98aaf)
+-   fix bug where highlight removes agent instance outlines [`dfdc925`](https://github.com/simularium/simularium-viewer/commit/dfdc92508921efea3d8bc2e772e354305c5cdc3a)
 
 #### [v2.4.3](https://github.com/simularium/simularium-viewer/compare/v2.4.2...v2.4.3)
 
 > 16 October 2020
 
-- Feature/2 camera reset [`#55`](https://github.com/simularium/simularium-viewer/pull/55)
-- lifted camera controls into controller [`9635752`](https://github.com/simularium/simularium-viewer/commit/963575299868ac52b25bd1c19adbc15f0a77dd72)
-- re-orient works [`d00c9de`](https://github.com/simularium/simularium-viewer/commit/d00c9de8b3d70482f98f79b169045b9e3201c172)
-- using angle between to move camera [`6037700`](https://github.com/simularium/simularium-viewer/commit/60377005713380491900e22f0321207c34415c1a)
+-   Feature/2 camera reset [`#55`](https://github.com/simularium/simularium-viewer/pull/55)
+-   lifted camera controls into controller [`9635752`](https://github.com/simularium/simularium-viewer/commit/963575299868ac52b25bd1c19adbc15f0a77dd72)
+-   re-orient works [`d00c9de`](https://github.com/simularium/simularium-viewer/commit/d00c9de8b3d70482f98f79b169045b9e3201c172)
+-   using angle between to move camera [`6037700`](https://github.com/simularium/simularium-viewer/commit/60377005713380491900e22f0321207c34415c1a)
 
 #### [v2.4.2](https://github.com/simularium/simularium-viewer/compare/v2.4.1...v2.4.2)
 
 > 15 October 2020
 
-- Fix/make background black [`#59`](https://github.com/simularium/simularium-viewer/pull/59)
-- Feature/depth fade [`#57`](https://github.com/simularium/simularium-viewer/pull/57)
-- make depth cueing thresholds be relative to frontmost edge of scene bounds [`ee77e3c`](https://github.com/simularium/simularium-viewer/commit/ee77e3cbd86d9b2676bfac143f483b134a04fff0)
-- cleanup [`eddab48`](https://github.com/simularium/simularium-viewer/commit/eddab480ea744dabd523bd8ac739db760c90bdde)
-- new defaults for depth fade parameters [`2374edc`](https://github.com/simularium/simularium-viewer/commit/2374edc9937848b62c24e8268f15684feb11d0ee)
+-   Fix/make background black [`#59`](https://github.com/simularium/simularium-viewer/pull/59)
+-   Feature/depth fade [`#57`](https://github.com/simularium/simularium-viewer/pull/57)
+-   make depth cueing thresholds be relative to frontmost edge of scene bounds [`ee77e3c`](https://github.com/simularium/simularium-viewer/commit/ee77e3cbd86d9b2676bfac143f483b134a04fff0)
+-   cleanup [`eddab48`](https://github.com/simularium/simularium-viewer/commit/eddab480ea744dabd523bd8ac739db760c90bdde)
+-   new defaults for depth fade parameters [`2374edc`](https://github.com/simularium/simularium-viewer/commit/2374edc9937848b62c24e8268f15684feb11d0ee)
 
 #### [v2.4.1](https://github.com/simularium/simularium-viewer/compare/v2.4.0...v2.4.1)
 
 > 13 October 2020
 
-- Fix/agent color prop type [`#58`](https://github.com/simularium/simularium-viewer/pull/58)
-- fixed typing of agentColors [`984f847`](https://github.com/simularium/simularium-viewer/commit/984f847988f924ba3847fbf5d89a3eda3b6c8f26)
-- typeCheck fixes [`60078df`](https://github.com/simularium/simularium-viewer/commit/60078dfbd8ccec72700135017c186372a14b9341)
-- agent colors is a optional param [`0edfe80`](https://github.com/simularium/simularium-viewer/commit/0edfe800518a03ea47ec1855aca97e3871e2091b)
+-   Fix/agent color prop type [`#58`](https://github.com/simularium/simularium-viewer/pull/58)
+-   fixed typing of agentColors [`984f847`](https://github.com/simularium/simularium-viewer/commit/984f847988f924ba3847fbf5d89a3eda3b6c8f26)
+-   typeCheck fixes [`60078df`](https://github.com/simularium/simularium-viewer/commit/60078dfbd8ccec72700135017c186372a14b9341)
+-   agent colors is a optional param [`0edfe80`](https://github.com/simularium/simularium-viewer/commit/0edfe800518a03ea47ec1855aca97e3871e2091b)
 
 #### [v2.4.0](https://github.com/simularium/simularium-viewer/compare/v2.3.3...v2.4.0)
 
 > 13 October 2020
 
-- Feature/pass-in-colors-as-param [`#56`](https://github.com/simularium/simularium-viewer/pull/56)
-- pass colors in as param, convert #... -> 0x... hex rep [`1776cfd`](https://github.com/simularium/simularium-viewer/commit/1776cfda021ce4322c9305b0adbf12252d1f744d)
-- return color in UI Display Data [`948e332`](https://github.com/simularium/simularium-viewer/commit/948e3320c706d6b1adf5b16826aae5d2e81b14a0)
-- use visAgent.setColor instead of bool [`a8ce906`](https://github.com/simularium/simularium-viewer/commit/a8ce90631377685b5289d92f7e83ed7877044559)
+-   Feature/pass-in-colors-as-param [`#56`](https://github.com/simularium/simularium-viewer/pull/56)
+-   pass colors in as param, convert #... -> 0x... hex rep [`1776cfd`](https://github.com/simularium/simularium-viewer/commit/1776cfda021ce4322c9305b0adbf12252d1f744d)
+-   return color in UI Display Data [`948e332`](https://github.com/simularium/simularium-viewer/commit/948e3320c706d6b1adf5b16826aae5d2e81b14a0)
+-   use visAgent.setColor instead of bool [`a8ce906`](https://github.com/simularium/simularium-viewer/commit/a8ce90631377685b5289d92f7e83ed7877044559)
 
 #### [v2.3.3](https://github.com/simularium/simularium-viewer/compare/v2.3.2...v2.3.3)
 
 > 12 October 2020
 
-- Feature/lift up errors [`#54`](https://github.com/simularium/simularium-viewer/pull/54)
-- made a field to pass up formatted data [`09afcec`](https://github.com/simularium/simularium-viewer/commit/09afcecc2b81cb9db04f654b0bb0836ef0683877)
-- passing up error if typeMapping is missing [`d68fa60`](https://github.com/simularium/simularium-viewer/commit/d68fa60e16d70c2965a3907f672bf236ee1a4301)
-- [wip] - passing in onError [`7674588`](https://github.com/simularium/simularium-viewer/commit/7674588c1b6936e4efd8820cc83eb9bf10c183d7)
+-   Feature/lift up errors [`#54`](https://github.com/simularium/simularium-viewer/pull/54)
+-   made a field to pass up formatted data [`09afcec`](https://github.com/simularium/simularium-viewer/commit/09afcecc2b81cb9db04f654b0bb0836ef0683877)
+-   passing up error if typeMapping is missing [`d68fa60`](https://github.com/simularium/simularium-viewer/commit/d68fa60e16d70c2965a3907f672bf236ee1a4301)
+-   [wip] - passing in onError [`7674588`](https://github.com/simularium/simularium-viewer/commit/7674588c1b6936e4efd8820cc83eb9bf10c183d7)
 
 #### [v2.3.2](https://github.com/simularium/simularium-viewer/compare/v2.3.1...v2.3.2)
 
 > 6 October 2020
 
-- Feature/select unmodified [`#53`](https://github.com/simularium/simularium-viewer/pull/53)
-- added more tests to getIds, and made selection tests include more agents [`3bd50d0`](https://github.com/simularium/simularium-viewer/commit/3bd50d0c18cffa7e2095a8f2d49bf42c54724c72)
-- seperated test data out for clearer tests [`71ab9ec`](https://github.com/simularium/simularium-viewer/commit/71ab9ec27233aec0aa671bde8e86b998f7d6fff3)
-- added test for empty string [`c886524`](https://github.com/simularium/simularium-viewer/commit/c88652462df37f9f11a2eb6ea47d9e7d61f656a4)
+-   Feature/select unmodified [`#53`](https://github.com/simularium/simularium-viewer/pull/53)
+-   added more tests to getIds, and made selection tests include more agents [`3bd50d0`](https://github.com/simularium/simularium-viewer/commit/3bd50d0c18cffa7e2095a8f2d49bf42c54724c72)
+-   seperated test data out for clearer tests [`71ab9ec`](https://github.com/simularium/simularium-viewer/commit/71ab9ec27233aec0aa671bde8e86b998f7d6fff3)
+-   added test for empty string [`c886524`](https://github.com/simularium/simularium-viewer/commit/c88652462df37f9f11a2eb6ea47d9e7d61f656a4)
 
 #### [v2.3.1](https://github.com/simularium/simularium-viewer/compare/v2.2.0...v2.3.1)
 
 > 2 October 2020
 
-- Quickfix: multiple connects [`#52`](https://github.com/simularium/simularium-viewer/pull/52)
-- Updates Selection-State-Info to nested structure [`#51`](https://github.com/simularium/simularium-viewer/pull/51)
-- follow point on the middle of fiber [`#50`](https://github.com/simularium/simularium-viewer/pull/50)
-- Update: Initialize viewer without establishing a net connection [`#49`](https://github.com/simularium/simularium-viewer/pull/49)
-- Fix/agent instance map [`#48`](https://github.com/simularium/simularium-viewer/pull/48)
-- removed check for if the new file is the same as old file [`#47`](https://github.com/simularium/simularium-viewer/pull/47)
-- update selectionInterface & tests w/ nested structure [`0794ed3`](https://github.com/simularium/simularium-viewer/commit/0794ed3829b37fc96dbeb530e8789cf7d4c95556)
-- move netConnection reference out of viewport/index.tsx [`cc78b2f`](https://github.com/simularium/simularium-viewer/commit/cc78b2fe9b621bb2ea187cac88c9185ab1a95edf)
-- correct usage of Map [`77d952d`](https://github.com/simularium/simularium-viewer/commit/77d952d7c409d37b5f23b54d0767e40cb89e8073)
+-   Quickfix: multiple connects [`#52`](https://github.com/simularium/simularium-viewer/pull/52)
+-   Updates Selection-State-Info to nested structure [`#51`](https://github.com/simularium/simularium-viewer/pull/51)
+-   follow point on the middle of fiber [`#50`](https://github.com/simularium/simularium-viewer/pull/50)
+-   Update: Initialize viewer without establishing a net connection [`#49`](https://github.com/simularium/simularium-viewer/pull/49)
+-   Fix/agent instance map [`#48`](https://github.com/simularium/simularium-viewer/pull/48)
+-   removed check for if the new file is the same as old file [`#47`](https://github.com/simularium/simularium-viewer/pull/47)
+-   update selectionInterface & tests w/ nested structure [`0794ed3`](https://github.com/simularium/simularium-viewer/commit/0794ed3829b37fc96dbeb530e8789cf7d4c95556)
+-   move netConnection reference out of viewport/index.tsx [`cc78b2f`](https://github.com/simularium/simularium-viewer/commit/cc78b2fe9b621bb2ea187cac88c9185ab1a95edf)
+-   correct usage of Map [`77d952d`](https://github.com/simularium/simularium-viewer/commit/77d952d7c409d37b5f23b54d0767e40cb89e8073)
 
 #### [v2.2.0](https://github.com/simularium/simularium-viewer/compare/v2.1.3...v2.2.0)
 
 > 15 September 2020
 
-- Feature/outline for highlight [`#46`](https://github.com/simularium/simularium-viewer/pull/46)
-- add outlining for selections, and add parameters for thickness and alpha [`3e7d69e`](https://github.com/simularium/simularium-viewer/commit/3e7d69ed590d1ef6dab1f77ba370cf7a615a0243)
-- shader cleanup [`7162b72`](https://github.com/simularium/simularium-viewer/commit/7162b720aba224f1540fa66f2778fc0b9563119c)
-- fix zoom speed and change outlining algo for highlighted types [`149a1ce`](https://github.com/simularium/simularium-viewer/commit/149a1ce70f0e73158c2ccbe1e34c4e7d62f2e53f)
+-   Feature/outline for highlight [`#46`](https://github.com/simularium/simularium-viewer/pull/46)
+-   add outlining for selections, and add parameters for thickness and alpha [`3e7d69e`](https://github.com/simularium/simularium-viewer/commit/3e7d69ed590d1ef6dab1f77ba370cf7a615a0243)
+-   shader cleanup [`7162b72`](https://github.com/simularium/simularium-viewer/commit/7162b720aba224f1540fa66f2778fc0b9563119c)
+-   fix zoom speed and change outlining algo for highlighted types [`149a1ce`](https://github.com/simularium/simularium-viewer/commit/149a1ce70f0e73158c2ccbe1e34c4e7d62f2e53f)
 
 #### [v2.1.3](https://github.com/simularium/simularium-viewer/compare/v2.1.2...v2.1.3)
 
 > 15 September 2020
 
-- handle vistype change for agents that were fiber in the last frame [`#45`](https://github.com/simularium/simularium-viewer/pull/45)
-- Bugfix/fiber positions [`#44`](https://github.com/simularium/simularium-viewer/pull/44)
-- careful choice of fiber position updates [`cc18202`](https://github.com/simularium/simularium-viewer/commit/cc182024f26f6edfe536288efa89c605f28a23ad)
-- try resetting every instance [`72e9579`](https://github.com/simularium/simularium-viewer/commit/72e9579852b55a6ac93f331060a4fcf39f17151b)
-- correct fiber transform and try to fix its instanceId [`001d2c3`](https://github.com/simularium/simularium-viewer/commit/001d2c38c8af7f3f0788b6caaa10023670397438)
+-   handle vistype change for agents that were fiber in the last frame [`#45`](https://github.com/simularium/simularium-viewer/pull/45)
+-   Bugfix/fiber positions [`#44`](https://github.com/simularium/simularium-viewer/pull/44)
+-   careful choice of fiber position updates [`cc18202`](https://github.com/simularium/simularium-viewer/commit/cc182024f26f6edfe536288efa89c605f28a23ad)
+-   try resetting every instance [`72e9579`](https://github.com/simularium/simularium-viewer/commit/72e9579852b55a6ac93f331060a4fcf39f17151b)
+-   correct fiber transform and try to fix its instanceId [`001d2c3`](https://github.com/simularium/simularium-viewer/commit/001d2c38c8af7f3f0788b6caaa10023670397438)
 
 #### [v2.1.2](https://github.com/simularium/simularium-viewer/compare/v2.1.1...v2.1.2)
 
 > 9 September 2020
 
-- adding error status interface for file change [`#43`](https://github.com/simularium/simularium-viewer/pull/43)
-- adding error status for file change [`d89ed13`](https://github.com/simularium/simularium-viewer/commit/d89ed1386e994122f89789a84658acd587f69fae)
-- reject error objects [`cbeb025`](https://github.com/simularium/simularium-viewer/commit/cbeb0251c94885f520570e57ac322f740feb967a)
-- removed unused var [`66fcbfb`](https://github.com/simularium/simularium-viewer/commit/66fcbfbac07b964d53ccb640b16ae19e29383158)
+-   adding error status interface for file change [`#43`](https://github.com/simularium/simularium-viewer/pull/43)
+-   adding error status for file change [`d89ed13`](https://github.com/simularium/simularium-viewer/commit/d89ed1386e994122f89789a84658acd587f69fae)
+-   reject error objects [`cbeb025`](https://github.com/simularium/simularium-viewer/commit/cbeb0251c94885f520570e57ac322f740feb967a)
+-   removed unused var [`66fcbfb`](https://github.com/simularium/simularium-viewer/commit/66fcbfbac07b964d53ccb640b16ae19e29383158)
 
 #### [v2.1.1](https://github.com/simularium/simularium-viewer/compare/v2.1.0...v2.1.1)
 
 > 8 September 2020
 
-- moved drag and drop out of viewer [`#42`](https://github.com/simularium/simularium-viewer/pull/42)
-- removed log [`1fe7716`](https://github.com/simularium/simularium-viewer/commit/1fe7716b92b95c2385ffcf69a959a821f5dfed0b)
+-   moved drag and drop out of viewer [`#42`](https://github.com/simularium/simularium-viewer/pull/42)
+-   removed log [`1fe7716`](https://github.com/simularium/simularium-viewer/commit/1fe7716b92b95c2385ffcf69a959a821f5dfed0b)
 
 #### [v2.1.0](https://github.com/simularium/simularium-viewer/compare/v2.0.1...v2.1.0)
 
 > 3 September 2020
 
-- Feature/file format v1 [`#41`](https://github.com/simularium/simularium-viewer/pull/41)
-- Feature/show hide agents [`#40`](https://github.com/simularium/simularium-viewer/pull/40)
-- Feature/add agent ids [`#39`](https://github.com/simularium/simularium-viewer/pull/39)
-- remove pdb coordinate fixup hack [`#37`](https://github.com/simularium/simularium-viewer/pull/37)
-- Update/handle no type mapping [`#38`](https://github.com/simularium/simularium-viewer/pull/38)
-- outlining for followed (selected) agent [`#35`](https://github.com/simularium/simularium-viewer/pull/35)
-- reversed call to reset camera when unfollow obj [`#36`](https://github.com/simularium/simularium-viewer/pull/36)
-- initial implementation of instance ids per agent [`a7f74bb`](https://github.com/simularium/simularium-viewer/commit/a7f74bbf21a75e9ff965923f86fc7e00aef511be)
-- WIP use ids for type-mapping info in drag-and-drop [`6734f03`](https://github.com/simularium/simularium-viewer/commit/6734f03cfb9b21d0fdb60df8d985d4d2cdbfdd61)
-- adding checkboxes for agents [`1ce6595`](https://github.com/simularium/simularium-viewer/commit/1ce6595d96eb76b3ee82cf4eb2312059466a0ba0)
+-   Feature/file format v1 [`#41`](https://github.com/simularium/simularium-viewer/pull/41)
+-   Feature/show hide agents [`#40`](https://github.com/simularium/simularium-viewer/pull/40)
+-   Feature/add agent ids [`#39`](https://github.com/simularium/simularium-viewer/pull/39)
+-   remove pdb coordinate fixup hack [`#37`](https://github.com/simularium/simularium-viewer/pull/37)
+-   Update/handle no type mapping [`#38`](https://github.com/simularium/simularium-viewer/pull/38)
+-   outlining for followed (selected) agent [`#35`](https://github.com/simularium/simularium-viewer/pull/35)
+-   reversed call to reset camera when unfollow obj [`#36`](https://github.com/simularium/simularium-viewer/pull/36)
+-   initial implementation of instance ids per agent [`a7f74bb`](https://github.com/simularium/simularium-viewer/commit/a7f74bbf21a75e9ff965923f86fc7e00aef511be)
+-   WIP use ids for type-mapping info in drag-and-drop [`6734f03`](https://github.com/simularium/simularium-viewer/commit/6734f03cfb9b21d0fdb60df8d985d4d2cdbfdd61)
+-   adding checkboxes for agents [`1ce6595`](https://github.com/simularium/simularium-viewer/commit/1ce6595d96eb76b3ee82cf4eb2312059466a0ba0)
 
 #### [v2.0.1](https://github.com/simularium/simularium-viewer/compare/v2.0.0...v2.0.1)
 
 > 24 August 2020
 
-- Feature/default renderer [`#34`](https://github.com/simularium/simularium-viewer/pull/34)
-- Ignore empty strings in selection interface request [`#33`](https://github.com/simularium/simularium-viewer/pull/33)
-- Cleanup and typing [`#32`](https://github.com/simularium/simularium-viewer/pull/32)
-- fixing no exported member warning [`5372b5e`](https://github.com/simularium/simularium-viewer/commit/5372b5e9aab3051de89d20057c6253f626470d8a)
-- fixed NetMessageEnum export [`be06814`](https://github.com/simularium/simularium-viewer/commit/be0681414685af75a3dd984acd7c328bc3c38300)
-- delinting and typing cleanup [`120632e`](https://github.com/simularium/simularium-viewer/commit/120632eb10bf00989a3392b142902107b3f0de67)
+-   Feature/default renderer [`#34`](https://github.com/simularium/simularium-viewer/pull/34)
+-   Ignore empty strings in selection interface request [`#33`](https://github.com/simularium/simularium-viewer/pull/33)
+-   Cleanup and typing [`#32`](https://github.com/simularium/simularium-viewer/pull/32)
+-   fixing no exported member warning [`5372b5e`](https://github.com/simularium/simularium-viewer/commit/5372b5e9aab3051de89d20057c6253f626470d8a)
+-   fixed NetMessageEnum export [`be06814`](https://github.com/simularium/simularium-viewer/commit/be0681414685af75a3dd984acd7c328bc3c38300)
+-   delinting and typing cleanup [`120632e`](https://github.com/simularium/simularium-viewer/commit/120632eb10bf00989a3392b142902107b3f0de67)
 
 ### [v2.0.0](https://github.com/simularium/simularium-viewer/compare/v1.2.14...v2.0.0)
 
 > 14 August 2020
 
-- Hotfix - falsey checks in selection interface [`#31`](https://github.com/simularium/simularium-viewer/pull/31)
-- bugfix, 0 checks in selection interface [`64c9412`](https://github.com/simularium/simularium-viewer/commit/64c94128df041cccff4babc756b6bf7f8a887bc8)
+-   Hotfix - falsey checks in selection interface [`#31`](https://github.com/simularium/simularium-viewer/pull/31)
+-   bugfix, 0 checks in selection interface [`64c9412`](https://github.com/simularium/simularium-viewer/commit/64c94128df041cccff4babc756b6bf7f8a887bc8)
 
 #### [v1.2.14](https://github.com/simularium/simularium-viewer/compare/v1.2.13...v1.2.14)
 
 > 13 August 2020
 
-- need build as a step [`2b00b1a`](https://github.com/simularium/simularium-viewer/commit/2b00b1a79aa1a59188d2e04304769fbed916b257)
+-   need build as a step [`2b00b1a`](https://github.com/simularium/simularium-viewer/commit/2b00b1a79aa1a59188d2e04304769fbed916b257)
 
 #### [v1.2.13](https://github.com/simularium/simularium-viewer/compare/v1.2.12...v1.2.13)
 
 > 13 August 2020
 
-- Feature/build publish with actions [`#24`](https://github.com/simularium/simularium-viewer/pull/24)
-- Feature/large scene optimizations [`#30`](https://github.com/simularium/simularium-viewer/pull/30)
-- Feature/cancel downloads safely [`#28`](https://github.com/simularium/simularium-viewer/pull/28)
-- check between click+drag and just click [`#26`](https://github.com/simularium/simularium-viewer/pull/26)
-- Feature/functional-interface-for-agent-selection [`#27`](https://github.com/simularium/simularium-viewer/pull/27)
-- generalize and hoist some server config information up to the controller [`#25`](https://github.com/simularium/simularium-viewer/pull/25)
-- audit fix and new publish script [`563d393`](https://github.com/simularium/simularium-viewer/commit/563d3935caad1273c362c780711b8c8dd3f94858)
-- several improvements for scene loading and changing, including default single sphere agents and early LOD approximation [`d3b28d1`](https://github.com/simularium/simularium-viewer/commit/d3b28d156a64879189d09f05ac77465172ae4628)
-- selection interface [`82e890c`](https://github.com/simularium/simularium-viewer/commit/82e890c4ee195f3ea1cda1a71ad5362ee2cbecf8)
+-   Feature/build publish with actions [`#24`](https://github.com/simularium/simularium-viewer/pull/24)
+-   Feature/large scene optimizations [`#30`](https://github.com/simularium/simularium-viewer/pull/30)
+-   Feature/cancel downloads safely [`#28`](https://github.com/simularium/simularium-viewer/pull/28)
+-   check between click+drag and just click [`#26`](https://github.com/simularium/simularium-viewer/pull/26)
+-   Feature/functional-interface-for-agent-selection [`#27`](https://github.com/simularium/simularium-viewer/pull/27)
+-   generalize and hoist some server config information up to the controller [`#25`](https://github.com/simularium/simularium-viewer/pull/25)
+-   audit fix and new publish script [`563d393`](https://github.com/simularium/simularium-viewer/commit/563d3935caad1273c362c780711b8c8dd3f94858)
+-   several improvements for scene loading and changing, including default single sphere agents and early LOD approximation [`d3b28d1`](https://github.com/simularium/simularium-viewer/commit/d3b28d156a64879189d09f05ac77465172ae4628)
+-   selection interface [`82e890c`](https://github.com/simularium/simularium-viewer/commit/82e890c4ee195f3ea1cda1a71ad5362ee2cbecf8)
 
 #### [v1.2.12](https://github.com/simularium/simularium-viewer/compare/v1.2.11...v1.2.12)
 
@@ -772,10 +772,10 @@ Generated by [`auto-changelog`](https://github.com/CookPete/auto-changelog).
 
 > 10 August 2020
 
-- Feature/queue lod computation [`#23`](https://github.com/simularium/simularium-viewer/pull/23)
-- taskqueue is no longer a singleton, and add tests [`df07a72`](https://github.com/simularium/simularium-viewer/commit/df07a72e94f3bf1ecb5b6e6d930ba144b42a2c4d)
-- add a task queue with a limit of at most 4 active concurrent tasks [`3ab8b8f`](https://github.com/simularium/simularium-viewer/commit/3ab8b8f6f2c459ee4022889ba6d4422d4d6f69ed)
-- fix unhandled rejection error in jest tests [`a491a34`](https://github.com/simularium/simularium-viewer/commit/a491a34d02ffe086eaaff86ed4fd2e6765083040)
+-   Feature/queue lod computation [`#23`](https://github.com/simularium/simularium-viewer/pull/23)
+-   taskqueue is no longer a singleton, and add tests [`df07a72`](https://github.com/simularium/simularium-viewer/commit/df07a72e94f3bf1ecb5b6e6d930ba144b42a2c4d)
+-   add a task queue with a limit of at most 4 active concurrent tasks [`3ab8b8f`](https://github.com/simularium/simularium-viewer/commit/3ab8b8f6f2c459ee4022889ba6d4422d4d6f69ed)
+-   fix unhandled rejection error in jest tests [`a491a34`](https://github.com/simularium/simularium-viewer/commit/a491a34d02ffe086eaaff86ed4fd2e6765083040)
 
 #### [v1.2.10](https://github.com/simularium/simularium-viewer/compare/v1.2.9...v1.2.10)
 
@@ -785,49 +785,49 @@ Generated by [`auto-changelog`](https://github.com/CookPete/auto-changelog).
 
 > 4 August 2020
 
-- Feature/export style [`#21`](https://github.com/simularium/simularium-viewer/pull/21)
-- added simple example viewer to readme [`cb9afc0`](https://github.com/simularium/simularium-viewer/commit/cb9afc0479b9bd8d2730ce8412746a471b73b252)
-- removed generated file [`4e425c1`](https://github.com/simularium/simularium-viewer/commit/4e425c126f1dba4474312d835cb398a857f9e084)
-- updating example for style import [`a49f7d6`](https://github.com/simularium/simularium-viewer/commit/a49f7d60c888fa5a9ddaa26ff5084e0947a5df2e)
+-   Feature/export style [`#21`](https://github.com/simularium/simularium-viewer/pull/21)
+-   added simple example viewer to readme [`cb9afc0`](https://github.com/simularium/simularium-viewer/commit/cb9afc0479b9bd8d2730ce8412746a471b73b252)
+-   removed generated file [`4e425c1`](https://github.com/simularium/simularium-viewer/commit/4e425c126f1dba4474312d835cb398a857f9e084)
+-   updating example for style import [`a49f7d6`](https://github.com/simularium/simularium-viewer/commit/a49f7d60c888fa5a9ddaa26ff5084e0947a5df2e)
 
 #### [v1.2.8](https://github.com/simularium/simularium-viewer/compare/v1.2.7...v1.2.8)
 
 > 4 August 2020
 
-- changed to left click [`#22`](https://github.com/simularium/simularium-viewer/pull/22)
-- Update ci.yml [`83281f9`](https://github.com/simularium/simularium-viewer/commit/83281f966512a561883dc76202d855919bed7f7d)
+-   changed to left click [`#22`](https://github.com/simularium/simularium-viewer/pull/22)
+-   Update ci.yml [`83281f9`](https://github.com/simularium/simularium-viewer/commit/83281f966512a561883dc76202d855919bed7f7d)
 
 #### [v1.2.7](https://github.com/simularium/simularium-viewer/compare/v1.2.3...v1.2.7)
 
 > 31 July 2020
 
-- Feature/merge drag n drop change file [`#19`](https://github.com/simularium/simularium-viewer/pull/19)
-- Feature/gh actions ci [`#20`](https://github.com/simularium/simularium-viewer/pull/20)
-- Fix/drag n drop autoplay [`#17`](https://github.com/simularium/simularium-viewer/pull/17)
-- Feature/linter cleanup [`#18`](https://github.com/simularium/simularium-viewer/pull/18)
-- Feature/read pdb [`#16`](https://github.com/simularium/simularium-viewer/pull/16)
-- Feature/kmeans webworker [`#15`](https://github.com/simularium/simularium-viewer/pull/15)
-- Feature/camera reset button [`#14`](https://github.com/simularium/simularium-viewer/pull/14)
-- Bugfix/reset follow object [`#13`](https://github.com/simularium/simularium-viewer/pull/13)
-- make sure things update properly [`#12`](https://github.com/simularium/simularium-viewer/pull/12)
-- add type highlighting to molecular rendering mode, and fix it in defa… [`#11`](https://github.com/simularium/simularium-viewer/pull/11)
-- Bugfix/data driven pdbs [`#10`](https://github.com/simularium/simularium-viewer/pull/10)
-- VisAgents now handle fibers also [`#9`](https://github.com/simularium/simularium-viewer/pull/9)
-- Feature/draw pdbmodels [`#8`](https://github.com/simularium/simularium-viewer/pull/8)
-- Feature/kmeans lod [`#7`](https://github.com/simularium/simularium-viewer/pull/7)
-- Rename agentviz/sim => simularium [`#6`](https://github.com/simularium/simularium-viewer/pull/6)
-- Feature - add an orchestrator class [`#4`](https://github.com/simularium/simularium-viewer/pull/4)
-- Feature/meshtogbuffer [`#2`](https://github.com/simularium/simularium-viewer/pull/2)
-- add threejs frame stats [`#3`](https://github.com/simularium/simularium-viewer/pull/3)
-- Feature/colordepthfade [`#1`](https://github.com/simularium/simularium-viewer/pull/1)
-- clean up the package.json [`56f4a7f`](https://github.com/simularium/simularium-viewer/commit/56f4a7fe1bf0b05de5553c924843e8fac689af4e)
-- delete pdb assets that have no place here anymore [`785a5d0`](https://github.com/simularium/simularium-viewer/commit/785a5d050b1d26a1fdcf8f5746fd47cbfd5ecf88)
-- support a pdb per mesh obj file to associate with agent types [`d08e105`](https://github.com/simularium/simularium-viewer/commit/d08e10550a4594c059daf1acaa99c4150eaaa9db)
+-   Feature/merge drag n drop change file [`#19`](https://github.com/simularium/simularium-viewer/pull/19)
+-   Feature/gh actions ci [`#20`](https://github.com/simularium/simularium-viewer/pull/20)
+-   Fix/drag n drop autoplay [`#17`](https://github.com/simularium/simularium-viewer/pull/17)
+-   Feature/linter cleanup [`#18`](https://github.com/simularium/simularium-viewer/pull/18)
+-   Feature/read pdb [`#16`](https://github.com/simularium/simularium-viewer/pull/16)
+-   Feature/kmeans webworker [`#15`](https://github.com/simularium/simularium-viewer/pull/15)
+-   Feature/camera reset button [`#14`](https://github.com/simularium/simularium-viewer/pull/14)
+-   Bugfix/reset follow object [`#13`](https://github.com/simularium/simularium-viewer/pull/13)
+-   make sure things update properly [`#12`](https://github.com/simularium/simularium-viewer/pull/12)
+-   add type highlighting to molecular rendering mode, and fix it in defa… [`#11`](https://github.com/simularium/simularium-viewer/pull/11)
+-   Bugfix/data driven pdbs [`#10`](https://github.com/simularium/simularium-viewer/pull/10)
+-   VisAgents now handle fibers also [`#9`](https://github.com/simularium/simularium-viewer/pull/9)
+-   Feature/draw pdbmodels [`#8`](https://github.com/simularium/simularium-viewer/pull/8)
+-   Feature/kmeans lod [`#7`](https://github.com/simularium/simularium-viewer/pull/7)
+-   Rename agentviz/sim => simularium [`#6`](https://github.com/simularium/simularium-viewer/pull/6)
+-   Feature - add an orchestrator class [`#4`](https://github.com/simularium/simularium-viewer/pull/4)
+-   Feature/meshtogbuffer [`#2`](https://github.com/simularium/simularium-viewer/pull/2)
+-   add threejs frame stats [`#3`](https://github.com/simularium/simularium-viewer/pull/3)
+-   Feature/colordepthfade [`#1`](https://github.com/simularium/simularium-viewer/pull/1)
+-   clean up the package.json [`56f4a7f`](https://github.com/simularium/simularium-viewer/commit/56f4a7fe1bf0b05de5553c924843e8fac689af4e)
+-   delete pdb assets that have no place here anymore [`785a5d0`](https://github.com/simularium/simularium-viewer/commit/785a5d050b1d26a1fdcf8f5746fd47cbfd5ecf88)
+-   support a pdb per mesh obj file to associate with agent types [`d08e105`](https://github.com/simularium/simularium-viewer/commit/d08e10550a4594c059daf1acaa99c4150eaaa9db)
 
 #### v1.2.3
 
 > 13 February 2020
 
-- Merge pull request #33 in AC/agentviz-viewer from feature/change-boundingbox-format to master [`1cedde6`](https://github.com/simularium/simularium-viewer/commit/1cedde65c7b970d8056b6822fe4f88d5c1b9bd28)
-- Merge pull request #32 in AC/agentviz-viewer from bugfix/clear-geometry to master [`133de21`](https://github.com/simularium/simularium-viewer/commit/133de215b04765bef9c52c2ccc2c4994c1d9b035)
-- wait for frame, don't render after file switch (until JSON vis-data arrives) [`a7a5721`](https://github.com/simularium/simularium-viewer/commit/a7a5721da6ea46ef2fbf658d6b2b51ceb6528672)
+-   Merge pull request #33 in AC/agentviz-viewer from feature/change-boundingbox-format to master [`1cedde6`](https://github.com/simularium/simularium-viewer/commit/1cedde65c7b970d8056b6822fe4f88d5c1b9bd28)
+-   Merge pull request #32 in AC/agentviz-viewer from bugfix/clear-geometry to master [`133de21`](https://github.com/simularium/simularium-viewer/commit/133de215b04765bef9c52c2ccc2c4994c1d9b035)
+-   wait for frame, don't render after file switch (until JSON vis-data arrives) [`a7a5721`](https://github.com/simularium/simularium-viewer/commit/a7a5721da6ea46ef2fbf658d6b2b51ceb6528672)
diff --git a/CODE_OF_CONDUCT.md b/CODE_OF_CONDUCT.md
index 622b7387..8ccaae03 100644
--- a/CODE_OF_CONDUCT.md
+++ b/CODE_OF_CONDUCT.md
@@ -14,22 +14,22 @@ appearance, race, religion, or sexual identity and orientation.
 Examples of behavior that contributes to creating a positive environment
 include:
 
-- Using welcoming and inclusive language
-- Being respectful of differing viewpoints and experiences
-- Gracefully accepting constructive criticism
-- Focusing on what is best for the community
-- Showing empathy towards other community members
+-   Using welcoming and inclusive language
+-   Being respectful of differing viewpoints and experiences
+-   Gracefully accepting constructive criticism
+-   Focusing on what is best for the community
+-   Showing empathy towards other community members
 
 Examples of unacceptable behavior by participants include:
 
-- The use of sexualized language or imagery and unwelcome sexual attention or
-  advances
-- Trolling, insulting/derogatory comments, and personal or political attacks
-- Public or private harassment
-- Publishing others' private information, such as a physical or electronic
-  address, without explicit permission
-- Other conduct which could reasonably be considered inappropriate in a
-  professional setting
+-   The use of sexualized language or imagery and unwelcome sexual attention or
+    advances
+-   Trolling, insulting/derogatory comments, and personal or political attacks
+-   Public or private harassment
+-   Publishing others' private information, such as a physical or electronic
+    address, without explicit permission
+-   Other conduct which could reasonably be considered inappropriate in a
+    professional setting
 
 ## Our Responsibilities
 
diff --git a/CONTRIBUTING.md b/CONTRIBUTING.md
index 18bace94..cc69ea11 100644
--- a/CONTRIBUTING.md
+++ b/CONTRIBUTING.md
@@ -17,16 +17,16 @@ project documentation. If you cannot find the documentation you're
 looking for, please file a GitHub issue with details of what
 you'd like to see documented.
 
-___
+---
 
 ## How to Contribute
 
 1. Fork the repo on GitHub.
 2. Create a branch and make your edits on your branch, pushing back to your fork.
 3. Make sure `npm run typeCheck`, `npm run test` and `npm run lint` all exit without errors. Add tests and documentation as needed.
-4. Submit a pull request back to main via GitHub using template, include screen shots for visual changes. 
+4. Submit a pull request back to main via GitHub using template, include screen shots for visual changes.
 
-___
+---
 
 ## Publishing
 
@@ -35,20 +35,22 @@ ___
 3. Push the new tag: `git push origin [NEW_TAG]` -- e.g. `git push origin v2.7.1`
 4. Write up [release notes](https://github.com/simularium/simularium-viewer/releases).
     - Select the tag
-    - Click "generate release notes" 
-    - Use this template to summarize changes (delete any categories that aren't relevant). `## Pull requests included in this release` should be above the auto generated content: 
+    - Click "generate release notes"
+    - Use this template to summarize changes (delete any categories that aren't relevant). `## Pull requests included in this release` should be above the auto generated content:
+
 ```Markdown
 ## What's Changed
 
-### **🎉 New features**   
+### **🎉 New features**
     -
 ### **🐞 Bug Fixes**
-    - 
-### **⛏ Maintenance** 
+    -
+### **⛏ Maintenance**
     -
 ## Pull requests included in this release
 ```
-___
+
+---
 
 ## Questions or Thoughts?
 
diff --git a/README.md b/README.md
index 0e4a020a..ae6d5511 100644
--- a/README.md
+++ b/README.md
@@ -108,16 +108,16 @@ This will run the example in `/examples/src/`, demonstrating the viewer's functi
 
 ## Quick Start
 
-| script            | comments                                                                                                                                          |
-| ----------------- | ------------------------------------------------------------------------------------------------------------------------------------------------- |
-| build             | create ES module build                                                                                                        |
-| clean             | remove generated artifacts                                                                                                                        |
-| generateTypes     | generate type declarations                                                                                                                        |
-| lint              | run eslint on `src` directory                                                                                                                     |
-| transpileES       | run babel on `src` directory; _do not_ transpile `import/export` statements for an ES module compatible build (used by bundlers for tree-shaking) |
-| test              | run `jest`; searches for any files matching the pattern "src/\*_/_.test.js"                                                                      |
-| typeCheck         | run `tsc` in type-check only mode                                                                                                                 |
-| start             | runs an example app from `examples` for testing. Runs at `localhost:8080/public/`. Use `--localserver` to run backend locally. With no flags, this script will default to using the staging octopus server as backend |
+| script        | comments                                                                                                                                                                                                              |
+| ------------- | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
+| build         | create ES module build                                                                                                                                                                                                |
+| clean         | remove generated artifacts                                                                                                                                                                                            |
+| generateTypes | generate type declarations                                                                                                                                                                                            |
+| lint          | run eslint on `src` directory                                                                                                                                                                                         |
+| transpileES   | run babel on `src` directory; _do not_ transpile `import/export` statements for an ES module compatible build (used by bundlers for tree-shaking)                                                                     |
+| test          | run `jest`; searches for any files matching the pattern "src/\*_/_.test.js"                                                                                                                                           |
+| typeCheck     | run `tsc` in type-check only mode                                                                                                                                                                                     |
+| start         | runs an example app from `examples` for testing. Runs at `localhost:8080/public/`. Use `--localserver` to run backend locally. With no flags, this script will default to using the staging octopus server as backend |
 
 ---
 
diff --git a/babel.config.js b/babel.config.js
index f2585307..3cf8a844 100644
--- a/babel.config.js
+++ b/babel.config.js
@@ -1,14 +1,6 @@
 module.exports = {
-    plugins: [
-        "@babel/plugin-transform-class-properties",
-        "const-enum",
-        "@babel/plugin-transform-runtime",
-    ],
-    presets: [
-        "@babel/preset-env",
-        "@babel/preset-typescript",
-        "@babel/preset-react",
-    ],
+    plugins: ["@babel/plugin-transform-class-properties", "const-enum", "@babel/plugin-transform-runtime"],
+    presets: ["@babel/preset-env", "@babel/preset-typescript", "@babel/preset-react"],
     env: {
         es: {
             presets: [["@babel/preset-env", { modules: false }]],
diff --git a/examples/babel.config.js b/examples/babel.config.js
index f2585307..3cf8a844 100644
--- a/examples/babel.config.js
+++ b/examples/babel.config.js
@@ -1,14 +1,6 @@
 module.exports = {
-    plugins: [
-        "@babel/plugin-transform-class-properties",
-        "const-enum",
-        "@babel/plugin-transform-runtime",
-    ],
-    presets: [
-        "@babel/preset-env",
-        "@babel/preset-typescript",
-        "@babel/preset-react",
-    ],
+    plugins: ["@babel/plugin-transform-class-properties", "const-enum", "@babel/plugin-transform-runtime"],
+    presets: ["@babel/preset-env", "@babel/preset-typescript", "@babel/preset-react"],
     env: {
         es: {
             presets: [["@babel/preset-env", { modules: false }]],
diff --git a/examples/package-lock.json b/examples/package-lock.json
index a66204c9..04539436 100644
--- a/examples/package-lock.json
+++ b/examples/package-lock.json
@@ -1,4938 +1,4938 @@
 {
-  "name": "testbed_viewer",
-  "version": "1.0.0",
-  "lockfileVersion": 3,
-  "requires": true,
-  "packages": {
-    "": {
-      "name": "testbed_viewer",
-      "version": "1.0.0",
-      "license": "ISC",
-      "dependencies": {
-        "detect-collisions": "^9.2.3",
-        "react": "^18.2.0",
-        "react-dom": "^18.2.0"
-      },
-      "devDependencies": {
-        "copy-webpack-plugin": "^12.0.2",
-        "css-loader": "^6.9.1",
-        "html-webpack-plugin": "^5.6.0",
-        "mini-css-extract-plugin": "^2.7.7",
-        "webpack": "^5.95.0",
-        "webpack-cli": "^5.1.4",
-        "webpack-dev-server": "^5.0.4"
-      }
-    },
-    "node_modules/@discoveryjs/json-ext": {
-      "version": "0.5.7",
-      "resolved": "https://registry.npmjs.org/@discoveryjs/json-ext/-/json-ext-0.5.7.tgz",
-      "integrity": "sha512-dBVuXR082gk3jsFp7Rd/JI4kytwGHecnCoTtXFb7DB6CNHp4rg5k1bhg0nWdLGLnOV71lmDzGQaLMy8iPLY0pw==",
-      "dev": true,
-      "engines": {
-        "node": ">=10.0.0"
-      }
-    },
-    "node_modules/@isaacs/cliui": {
-      "version": "8.0.2",
-      "resolved": "https://registry.npmjs.org/@isaacs/cliui/-/cliui-8.0.2.tgz",
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-        "string-width-cjs": "npm:string-width@^4.2.0",
-        "strip-ansi": "^7.0.1",
-        "strip-ansi-cjs": "npm:strip-ansi@^6.0.1",
-        "wrap-ansi": "^8.1.0",
-        "wrap-ansi-cjs": "npm:wrap-ansi@^7.0.0"
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+            "dev": true,
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+            "dev": true
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+            "dependencies": {
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+                "safe-buffer": ">=5.1.0",
+                "websocket-extensions": ">=0.1.1"
+            },
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+            }
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+            "dev": true,
+            "dependencies": {
+                "isexe": "^2.0.0"
+            },
+            "bin": {
+                "node-which": "bin/node-which"
+            },
+            "engines": {
+                "node": ">= 8"
+            }
+        },
+        "node_modules/wildcard": {
+            "version": "2.0.1",
+            "resolved": "https://registry.npmjs.org/wildcard/-/wildcard-2.0.1.tgz",
+            "integrity": "sha512-CC1bOL87PIWSBhDcTrdeLo6eGT7mCFtrg0uIJtqJUFyK+eJnzl8A1niH56uu7KMa5XFrtiV+AQuHO3n7DsHnLQ==",
+            "dev": true
+        },
+        "node_modules/wrap-ansi": {
+            "version": "8.1.0",
+            "resolved": "https://registry.npmjs.org/wrap-ansi/-/wrap-ansi-8.1.0.tgz",
+            "integrity": "sha512-si7QWI6zUMq56bESFvagtmzMdGOtoxfR+Sez11Mobfc7tm+VkUckk9bW2UeffTGVUbOksxmSw0AA2gs8g71NCQ==",
+            "dev": true,
+            "dependencies": {
+                "ansi-styles": "^6.1.0",
+                "string-width": "^5.0.1",
+                "strip-ansi": "^7.0.1"
+            },
+            "engines": {
+                "node": ">=12"
+            },
+            "funding": {
+                "url": "https://github.com/chalk/wrap-ansi?sponsor=1"
+            }
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+        "node_modules/wrap-ansi-cjs": {
+            "name": "wrap-ansi",
+            "version": "7.0.0",
+            "resolved": "https://registry.npmjs.org/wrap-ansi/-/wrap-ansi-7.0.0.tgz",
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+            "dev": true,
+            "dependencies": {
+                "ansi-styles": "^4.0.0",
+                "string-width": "^4.1.0",
+                "strip-ansi": "^6.0.0"
+            },
+            "engines": {
+                "node": ">=10"
+            },
+            "funding": {
+                "url": "https://github.com/chalk/wrap-ansi?sponsor=1"
+            }
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+            "dev": true,
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+            },
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+            },
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+                "url": "https://github.com/chalk/ansi-styles?sponsor=1"
+            }
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+            "version": "8.0.0",
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+        },
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+                "emoji-regex": "^8.0.0",
+                "is-fullwidth-code-point": "^3.0.0",
+                "strip-ansi": "^6.0.1"
+            },
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+                "node": ">=8"
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+                "url": "https://github.com/chalk/ansi-regex?sponsor=1"
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+            "version": "7.1.0",
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+                "url": "https://github.com/chalk/strip-ansi?sponsor=1"
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+            "engines": {
+                "node": ">=10.0.0"
+            },
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+                "bufferutil": "^4.0.1",
+                "utf-8-validate": ">=5.0.2"
+            },
+            "peerDependenciesMeta": {
+                "bufferutil": {
+                    "optional": true
+                },
+                "utf-8-validate": {
+                    "optional": true
+                }
+            }
+        },
+        "node_modules/yallist": {
+            "version": "4.0.0",
+            "resolved": "https://registry.npmjs.org/yallist/-/yallist-4.0.0.tgz",
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+            "dev": true
         }
-      }
-    },
-    "node_modules/yallist": {
-      "version": "4.0.0",
-      "resolved": "https://registry.npmjs.org/yallist/-/yallist-4.0.0.tgz",
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-      "dev": true
     }
-  }
 }
diff --git a/examples/package.json b/examples/package.json
index 8da3cd76..79a423d8 100644
--- a/examples/package.json
+++ b/examples/package.json
@@ -1,28 +1,28 @@
 {
-  "name": "testbed_viewer",
-  "version": "1.0.0",
-  "description": "",
-  "main": "index.js",
-  "scripts": {
-    "serve-example": "webpack serve --config webpack.dev.js",
-    "prebuild-example": "npm install",
-    "build-example": "webpack --config webpack.dev.js",
-    "test": "echo \"Error: no test specified\" && exit 1"
-  },
-  "author": "",
-  "license": "ISC",
-  "dependencies": {
-    "detect-collisions": "^9.2.3",
-    "react": "^18.2.0",
-    "react-dom": "^18.2.0"
-  },
-  "devDependencies": {
-    "copy-webpack-plugin": "^12.0.2",
-    "css-loader": "^6.9.1",
-    "html-webpack-plugin": "^5.6.0",
-    "mini-css-extract-plugin": "^2.7.7",
-    "webpack": "^5.95.0",
-    "webpack-cli": "^5.1.4",
-    "webpack-dev-server": "^5.0.4"
-  }
+    "name": "testbed_viewer",
+    "version": "1.0.0",
+    "description": "",
+    "main": "index.js",
+    "scripts": {
+        "serve-example": "webpack serve --config webpack.dev.js",
+        "prebuild-example": "npm install",
+        "build-example": "webpack --config webpack.dev.js",
+        "test": "echo \"Error: no test specified\" && exit 1"
+    },
+    "author": "",
+    "license": "ISC",
+    "dependencies": {
+        "detect-collisions": "^9.2.3",
+        "react": "^18.2.0",
+        "react-dom": "^18.2.0"
+    },
+    "devDependencies": {
+        "copy-webpack-plugin": "^12.0.2",
+        "css-loader": "^6.9.1",
+        "html-webpack-plugin": "^5.6.0",
+        "mini-css-extract-plugin": "^2.7.7",
+        "webpack": "^5.95.0",
+        "webpack-cli": "^5.1.4",
+        "webpack-dev-server": "^5.0.4"
+    }
 }
diff --git a/examples/src/AgentMetadata.tsx b/examples/src/AgentMetadata.tsx
deleted file mode 100644
index bfc15bf3..00000000
--- a/examples/src/AgentMetadata.tsx
+++ /dev/null
@@ -1,34 +0,0 @@
-import React from "react";
-import { AgentData } from "../../type-declarations/simularium/types";
-
-interface AgentMetadataProps {
-    agentData: AgentData;
-}
-
-const AgentMetadata = ({ agentData }: AgentMetadataProps): JSX.Element => {
-
-    const getContents = () => {
-        if (agentData.instanceId === -1) {
-            return <div>No agent selected</div>;
-        }
-        return (
-            <div>
-                <div> uniqueID: {agentData.instanceId}</div>
-                <div> agentType: {agentData.type}</div>
-                <div>
-                    position: x = {agentData.x}, y = {agentData.y}, z =
-                    {agentData.z}
-                </div>
-                <div>
-                    rotation: x = {agentData.xrot}, y = {agentData.yrot}, z =
-                    {agentData.zrot}
-                </div>
-                <div> radius: {agentData.cr}</div>
-            </div>
-        );
-    };
-
-    return <div>Agent Metadata: {getContents()}</div>;
-};
-
-export default AgentMetadata;
diff --git a/examples/src/Components/AgentMetadata.tsx b/examples/src/Components/AgentMetadata.tsx
new file mode 100644
index 00000000..ff0c795e
--- /dev/null
+++ b/examples/src/Components/AgentMetadata.tsx
@@ -0,0 +1,28 @@
+import React from "react";
+import { AgentData } from "../../../type-declarations/simularium/types";
+
+interface AgentMetadataProps {
+    agentData: AgentData;
+}
+
+const AgentMetadata = ({ agentData }: AgentMetadataProps): JSX.Element => {
+    if (agentData.instanceId === -1) {
+        return <div className="ui-container">No agent selected</div>;
+    }
+    return (
+        <div className="ui-container">
+            <div>Agent metadata</div>
+            <div> uniqueID: {agentData.instanceId}</div>
+            <div> agentType: {agentData.type}</div>
+            <div>
+                position: x = {agentData.x}, y = {agentData.y}, z ={agentData.z}
+            </div>
+            <div>
+                rotation: x = {agentData.xrot}, y = {agentData.yrot}, z ={agentData.zrot}
+            </div>
+            <div> radius: {agentData.cr}</div>
+        </div>
+    );
+};
+
+export default AgentMetadata;
diff --git a/examples/src/ColorPicker.tsx b/examples/src/Components/ColorPicker.tsx
similarity index 80%
rename from examples/src/ColorPicker.tsx
rename to examples/src/Components/ColorPicker.tsx
index 8db0aa33..15fa822d 100644
--- a/examples/src/ColorPicker.tsx
+++ b/examples/src/Components/ColorPicker.tsx
@@ -1,5 +1,5 @@
 import React, { useState } from "react";
-import { UIDisplayData } from "../../src";
+import { UIDisplayData } from "../../../src";
 
 type ColorPickerProps = {
     uiDisplayData: UIDisplayData;
@@ -23,9 +23,7 @@ const ColorPicker = ({
     const [colorToAppend, setColorToAppend] = useState("");
 
     const getSubAgentsforAgent = (agentName: string) => {
-        const agent = uiDisplayData.find(
-            (element) => element.name === agentName
-        );
+        const agent = uiDisplayData.find((element) => element.name === agentName);
         if (!agent) {
             throw new Error("No agent found");
         }
@@ -57,20 +55,15 @@ const ColorPicker = ({
                     if (subAgent.includes("")) {
                         newAgent.color = selectedColor;
                     }
-                    const newDisplayStates = agent.displayStates.map(
-                        (state: any) => {
-                            if (
-                                subAgent.includes(state.id) ||
-                                !subAgent.length
-                            ) {
-                                return {
-                                    ...state,
-                                    color: selectedColor,
-                                };
-                            }
-                            return state;
+                    const newDisplayStates = agent.displayStates.map((state: any) => {
+                        if (subAgent.includes(state.id) || !subAgent.length) {
+                            return {
+                                ...state,
+                                color: selectedColor,
+                            };
                         }
-                    );
+                        return state;
+                    });
                     newAgent.displayStates = newDisplayStates;
                 }
                 return newAgent;
@@ -90,7 +83,7 @@ const ColorPicker = ({
     };
 
     return (
-        <>
+        <div className="ui-container">
             <span>Color change agent selections:</span>
             <select id="agentSelect" onChange={handleAgentSelection}>
                 <option value=""> Select Agent</option>
@@ -100,16 +93,10 @@ const ColorPicker = ({
                     </option>
                 ))}
             </select>
-            <select
-                id="subAgentSelect"
-                onChange={(event) => setSelectedSubAgent(event.target.value)}
-            >
+            <select id="subAgentSelect" onChange={(event) => setSelectedSubAgent(event.target.value)}>
                 <option value="">Select Sub-Agent</option>
                 {subAgents.map((subAgent) => (
-                    <option
-                        key={subAgent.name}
-                        value={subAgent.id || subAgent.name}
-                    >
+                    <option key={subAgent.name} value={subAgent.id || subAgent.name}>
                         {subAgent.name}
                     </option>
                 ))}
@@ -136,10 +123,8 @@ const ColorPicker = ({
                     setColorToAppend(event.target.value);
                 }}
             ></input>
-            <button onClick={() => addColorToColorArray(colorToAppend)}>
-                Add color to color array
-            </button>
-        </>
+            <button onClick={() => addColorToColorArray(colorToAppend)}>Add color to color array</button>
+        </div>
     );
 };
 
diff --git a/examples/src/ConversionForm/BaseInput.tsx b/examples/src/Components/ConversionForm/BaseInput.tsx
similarity index 77%
rename from examples/src/ConversionForm/BaseInput.tsx
rename to examples/src/Components/ConversionForm/BaseInput.tsx
index 8a3306df..906d5070 100644
--- a/examples/src/ConversionForm/BaseInput.tsx
+++ b/examples/src/Components/ConversionForm/BaseInput.tsx
@@ -14,10 +14,7 @@ const BaseInput = (props: BaseInputProps) => {
                 <label>
                     {" "}
                     {props.name}
-                    <input
-                        type="text"
-                        onChange={(e) => props.handler(e.target.value)}
-                    />
+                    <input type="text" onChange={(e) => props.handler(e.target.value)} />
                 </label>
             );
         case "number":
@@ -25,10 +22,7 @@ const BaseInput = (props: BaseInputProps) => {
                 <label>
                     {" "}
                     {props.name}
-                    <input
-                        type="number"
-                        onChange={(e) => props.handler(Number(e.target.value))}
-                    />
+                    <input type="number" onChange={(e) => props.handler(Number(e.target.value))} />
                 </label>
             );
         case "enum":
@@ -63,10 +57,7 @@ const BaseInput = (props: BaseInputProps) => {
                 <label>
                     {" "}
                     {props.name}
-                    <input
-                        type="text"
-                        onChange={(e) => props.handler(e.target.value)}
-                    />
+                    <input type="text" onChange={(e) => props.handler(e.target.value)} />
                 </label>
             );
     }
diff --git a/examples/src/ConversionForm/CollectionInput.tsx b/examples/src/Components/ConversionForm/CollectionInput.tsx
similarity index 72%
rename from examples/src/ConversionForm/CollectionInput.tsx
rename to examples/src/Components/ConversionForm/CollectionInput.tsx
index 4dc7572d..d61182f0 100644
--- a/examples/src/ConversionForm/CollectionInput.tsx
+++ b/examples/src/Components/ConversionForm/CollectionInput.tsx
@@ -24,10 +24,7 @@ interface CollectionState {
     length: number;
 }
 
-class CollectionInput extends React.Component<
-    CollectionInputProps,
-    CollectionState
-> {
+class CollectionInput extends React.Component<CollectionInputProps, CollectionState> {
     constructor(props: CollectionInputProps) {
         super(props);
         this.state = {
@@ -37,12 +34,7 @@ class CollectionInput extends React.Component<
         this.addItem = this.addItem.bind(this);
     }
 
-    handleChange(
-        key: string,
-        index: number,
-        type: "key" | "value",
-        targetValue: any
-    ) {
+    handleChange(key: string, index: number, type: "key" | "value", targetValue: any) {
         const { handler, id } = this.props;
         const newState = { ...this.state };
         if (!newState[index]) {
@@ -90,24 +82,12 @@ class CollectionInput extends React.Component<
                     options={childItem.options || []}
                     dataType={currentDataType}
                     name={childItem.name}
-                    handler={(value) =>
-                        this.handleChange(
-                            newPath[newPath.length - 1],
-                            index,
-                            type,
-                            value
-                        )
-                    }
+                    handler={(value) => this.handleChange(newPath[newPath.length - 1], index, type, value)}
                 />
             );
         } else if (data.parameters) {
             return map(data.parameters, (childParameter, key) => {
-                return this.renderValueItem(
-                    childParameter,
-                    [...newPath, key],
-                    index,
-                    type
-                );
+                return this.renderValueItem(childParameter, [...newPath, key], index, type);
             });
         }
     };
@@ -126,28 +106,20 @@ class CollectionInput extends React.Component<
                     <h4>{index}:</h4>
                     <div>
                         Key:
-                        {this.renderValueItem(
-                            parameter.key_item,
-                            path,
-                            index,
-                            "key"
-                        )}
+                        {this.renderValueItem(parameter.key_item, path, index, "key")}
                     </div>
                     <div>
                         Value:
-                        {this.renderValueItem(
-                            parameter.value_item,
-                            path,
-                            index,
-                            "value"
-                        )}
+                        {this.renderValueItem(parameter.value_item, path, index, "value")}
                     </div>
                 </div>
             );
         }
         if (parameter.extendible) {
             jsx.push(
-                <button key={name} onClick={this.addItem}>Add another {name} item</button>
+                <button key={name} onClick={this.addItem}>
+                    Add another {name} item
+                </button>
             );
         }
         return jsx;
diff --git a/examples/src/ConversionForm/InputSwitch.tsx b/examples/src/Components/ConversionForm/InputSwitch.tsx
similarity index 69%
rename from examples/src/ConversionForm/InputSwitch.tsx
rename to examples/src/Components/ConversionForm/InputSwitch.tsx
index 3917ae8d..a15aee28 100644
--- a/examples/src/ConversionForm/InputSwitch.tsx
+++ b/examples/src/Components/ConversionForm/InputSwitch.tsx
@@ -15,12 +15,7 @@ interface InputSwitchProps {
 const InputSwitch = (props: InputSwitchProps) => {
     const { dataType, templateData, parameter, handler, path, id } = props;
 
-    const renderParameter = (
-        currentDataType: string,
-        key: string,
-        currentParameter,
-        recursive: boolean
-    ) => {
+    const renderParameter = (currentDataType: string, key: string, currentParameter, recursive: boolean) => {
         const data = templateData[currentDataType];
         if (currentDataType === "collection") {
             return (
@@ -40,7 +35,7 @@ const InputSwitch = (props: InputSwitchProps) => {
                     dataType={currentDataType}
                     options={currentParameter.options || []}
                     name={currentParameter.name}
-                    handler={(value) => {                
+                    handler={(value) => {
                         return handler(path, key, value);
                     }}
                 />
@@ -60,38 +55,28 @@ const InputSwitch = (props: InputSwitchProps) => {
     };
     const hasChildren = !!templateData[dataType].parameters;
     return (
-        <div style={{ borderTop: "1px solid black", padding: 20}}>
+        <div style={{ borderTop: "1px solid black", padding: 20 }}>
             {path.length <= 1 ? (
                 <h3>
                     {parameter.name}{" "}
                     <small>
-                        ({parameter.description})
-                        {parameter.required && <span>*</span>}
+                        ({parameter.description}){parameter.required && <span>*</span>}
                     </small>
                 </h3>
             ) : (
                 <h4>
                     {parameter.name}{" "}
                     <small>
-                        ({parameter.description}){" "}
-                        {parameter.required && <span>*</span>}
+                        ({parameter.description}) {parameter.required && <span>*</span>}
                     </small>
                 </h4>
             )}
 
             {hasChildren
-                ? map(
-                      templateData[dataType].parameters,
-                      (childParameter, key) => {
-                          const currentDataType = childParameter.data_type;
-                          return renderParameter(
-                              currentDataType,
-                              key,
-                              childParameter,
-                              true
-                          );
-                      }
-                  )
+                ? map(templateData[dataType].parameters, (childParameter, key) => {
+                      const currentDataType = childParameter.data_type;
+                      return renderParameter(currentDataType, key, childParameter, true);
+                  })
                 : renderParameter(dataType, id, parameter, false)}
         </div>
     );
diff --git a/examples/src/ConversionForm/index.tsx b/examples/src/Components/ConversionForm/index.tsx
similarity index 96%
rename from examples/src/ConversionForm/index.tsx
rename to examples/src/Components/ConversionForm/index.tsx
index 6342cbbb..9d4b296c 100644
--- a/examples/src/ConversionForm/index.tsx
+++ b/examples/src/Components/ConversionForm/index.tsx
@@ -24,10 +24,9 @@ class InputForm extends React.Component<InputFormProps> {
         if (path.length == 0) {
             newState = {
                 ...this.state[key],
-                [key] : value
-            }
+                [key]: value,
+            };
         } else {
-            
             // convert the paths into a nested object
             // make sure to copy any existing state at each level
             let tempObject = newState;
@@ -43,7 +42,7 @@ class InputForm extends React.Component<InputFormProps> {
                     thisValue = { ...currentState };
                     currentState = currentState[array[i + 1]] || {};
                 }
-    
+
                 tempObject = tempObject[nestedKey] = thisValue;
             });
         }
@@ -56,7 +55,7 @@ class InputForm extends React.Component<InputFormProps> {
             ...this.state,
         };
         console.log("submitting", payload);
-        this.props.submitFile(payload)
+        this.props.submitFile(payload);
     }
 
     render() {
diff --git a/examples/src/RecordMovieComponent.tsx b/examples/src/Components/RecordMovieComponent.tsx
similarity index 70%
rename from examples/src/RecordMovieComponent.tsx
rename to examples/src/Components/RecordMovieComponent.tsx
index 48499818..3b24b940 100644
--- a/examples/src/RecordMovieComponent.tsx
+++ b/examples/src/Components/RecordMovieComponent.tsx
@@ -3,11 +3,15 @@ import React, { useState, useEffect } from "react";
 interface RecordMovieComponentProps {
     startRecordingHandler: () => void;
     stopRecordingHandler: () => void;
+    setRecordingEnabled: () => void;
+    isRecordingEnabled: boolean;
 }
 
 const RecordMovieComponent = ({
     startRecordingHandler,
     stopRecordingHandler,
+    setRecordingEnabled,
+    isRecordingEnabled,
 }: RecordMovieComponentProps): JSX.Element => {
     // recording time measured in seconds
     const [isRecording, setIsRecording] = useState<boolean>(false);
@@ -43,30 +47,17 @@ const RecordMovieComponent = ({
     };
 
     return (
-        <div>
-            <button
-                onClick={startRecording}
-                disabled={isRecording || !browserSupported}
-            >
+        <div className="ui-container">
+            <button onClick={() => setRecordingEnabled()}>{isRecordingEnabled ? "Disable" : "Enable"} Recording</button>
+            <button onClick={startRecording} disabled={isRecording || !browserSupported || !isRecordingEnabled}>
                 Start Recording
             </button>
-            <button
-                onClick={stopRecording}
-                disabled={!isRecording || !browserSupported}
-            >
+            <button onClick={stopRecording} disabled={!isRecording || !browserSupported}>
                 Stop Recording
             </button>
             <div>{isRecording ? "Recording..." : ""}</div>
-            <div>
-                {!browserSupported ? "Browser does not support recording" : ""}
-            </div>
-            <div>
-                {isRecording
-                    ? "Recording duration:  " +
-                      recordingTimeElapsed +
-                      " seconds"
-                    : ""}
-            </div>
+            <div>{!browserSupported ? "Browser does not support recording" : ""}</div>
+            <div>{isRecording ? "Recording duration:  " + recordingTimeElapsed + " seconds" : ""}</div>
             <div>{outputStatus}</div>
         </div>
     );
diff --git a/examples/src/Viewer.tsx b/examples/src/Viewer.tsx
index 3f10b358..42763a45 100644
--- a/examples/src/Viewer.tsx
+++ b/examples/src/Viewer.tsx
@@ -1,23 +1,7 @@
 import React from "react";
-import { isEqual, findIndex, map, reduce } from "lodash";
+import { isEqual, findIndex, reduce } from "lodash";
 import { v4 as uuidv4 } from "uuid";
-
-import type {
-    ISimulariumFile,
-    UIDisplayData,
-    SelectionStateInfo,
-    SelectionEntry,
-} from "../../type-declarations";
-import { nullAgent, TrajectoryType } from "../../src/constants";
-import SimulariumViewer, {
-    SimulariumController,
-    RenderStyle,
-    loadSimulariumFile,
-    FrontEndError,
-    ErrorLevel,
-    NetConnectionParams,
-    TrajectoryFileInfo,
-} from "../../src/index";
+import { InputParams } from "tweakpane";
 
 /**
  * NOTE: if you are debugging an import/build issue
@@ -32,7 +16,18 @@ import SimulariumViewer, {
 //     FrontEndError,
 //     ErrorLevel,
 // } from "../es";
-import "../../style/style.css";
+import SimulariumViewer, {
+    SimulariumController,
+    RenderStyle,
+    loadSimulariumFile,
+    FrontEndError,
+    ErrorLevel,
+    NetConnectionParams,
+    TrajectoryFileInfo,
+} from "../../src/index";
+import { nullAgent, TrajectoryType } from "../../src/constants";
+
+import type { ISimulariumFile, UIDisplayData, SelectionStateInfo, SelectionEntry } from "../../type-declarations";
 import { AgentData } from "../../type-declarations/simularium/types";
 import PointSimulator from "./simulators/PointSimulator";
 import BindingSimulator from "./simulators/BindingSimulator2D";
@@ -41,8 +36,15 @@ import PdbSimulator from "./simulators/PdbSimulator";
 import SinglePdbSimulator from "./simulators/SinglePdbSimulator";
 import CurveSimulator from "./simulators/CurveSimulator";
 import SingleCurveSimulator from "./simulators/SingleCurveSimulator";
-import ColorPicker from "./ColorPicker";
-import RecordMovieComponent from "./RecordMovieComponent";
+import MetaballSimulator from "./simulators/MetaballSimulator";
+
+import ColorPicker from "./Components/ColorPicker";
+import RecordMovieComponent from "./Components/RecordMovieComponent";
+import ConversionForm from "./Components/ConversionForm";
+import AgentMetadata from "./Components/AgentMetadata";
+
+import { agentColors } from "./constants";
+import { BaseType, CustomType } from "./types";
 import {
     SMOLDYN_TEMPLATE,
     UI_BASE_TYPES,
@@ -50,9 +52,9 @@ import {
     UI_TEMPLATE_DOWNLOAD_URL_ROOT,
     UI_TEMPLATE_URL_ROOT,
 } from "./api-settings";
-import ConversionForm from "./ConversionForm";
-import MetaballSimulator from "./simulators/MetaballSimulator";
-import AgentMetadata from "./AgentMetadata";
+
+import "../../style/style.css";
+import "./style.css";
 
 let playbackFile = "TEST_LIVEMODE_API";
 let queryStringFile = "";
@@ -62,26 +64,6 @@ if (urlParams.has("file")) {
     playbackFile = queryStringFile;
 }
 
-const agentColors = [
-    "#fee34d",
-    "#f7b232",
-    "#bf5736",
-    "#94a7fc",
-    "#ce8ec9",
-    "#58606c",
-    "#0ba345",
-    "#9267cb",
-    "#81dbe6",
-    "#bd7800",
-    "#bbbb99",
-    "#5b79f0",
-    "#89a500",
-    "#da8692",
-    "#418463",
-    "#9f516c",
-    "#00aabf",
-];
-
 interface ViewerState {
     renderStyle: RenderStyle;
     particleTypeNames: string[];
@@ -113,34 +95,6 @@ interface ViewerState {
     followObjectData: AgentData;
 }
 
-interface BaseType {
-    isBaseType: true;
-    id: string;
-    data: string;
-    match: string;
-}
-
-export interface CustomParameters {
-    name: string;
-    data_type: string;
-    description: string;
-    required: boolean;
-    help: string;
-    options?: string[];
-}
-
-interface CustomType {
-    [key: string]: {
-        "python::module": string;
-        "python::object": string;
-        parameters: CustomParameters;
-    };
-}
-
-interface InputParams {
-    localBackendServer: boolean;
-}
-
 const simulariumController = new SimulariumController({});
 
 let currentFrame = 0;
@@ -232,13 +186,9 @@ class Viewer extends React.Component<InputParams, ViewerState> {
 
     public onError = (error: FrontEndError) => {
         if (error.level === ErrorLevel.ERROR) {
-            window.alert(
-                `ERROR, something is broken: ${error.message} ${error.htmlData}`
-            );
+            window.alert(`ERROR, something is broken: ${error.message} ${error.htmlData}`);
         } else if (error.level === ErrorLevel.WARNING) {
-            window.alert(
-                `User warning, but not terrible:  ${error.message} ${error.htmlData}`
-            );
+            window.alert(`User warning, but not terrible:  ${error.message} ${error.htmlData}`);
         } else if (error.level === ErrorLevel.INFO) {
             console.log(`Just for your info. ${error.message}`);
         } else {
@@ -260,25 +210,19 @@ class Viewer extends React.Component<InputParams, ViewerState> {
         try {
             // Try to identify the simularium file.
             // Put all the other files as text based geoAssets.
-            const simulariumFileIndex = findIndex(filesArr, (file) =>
-                file.name.includes(".simularium")
-            );
+            const simulariumFileIndex = findIndex(filesArr, (file) => file.name.includes(".simularium"));
             Promise.all(
-                filesArr.map(
-                    (element, index): Promise<string | ISimulariumFile> => {
-                        if (index !== simulariumFileIndex) {
-                            // is async call
-                            return element.text();
-                        } else {
-                            return loadSimulariumFile(element);
-                        }
+                filesArr.map((element, index): Promise<string | ISimulariumFile> => {
+                    if (index !== simulariumFileIndex) {
+                        // is async call
+                        return element.text();
+                    } else {
+                        return loadSimulariumFile(element);
                     }
-                )
+                })
             )
                 .then((parsedFiles: (ISimulariumFile | string)[]) => {
-                    const simulariumFile = parsedFiles[
-                        simulariumFileIndex
-                    ] as ISimulariumFile;
+                    const simulariumFile = parsedFiles[simulariumFileIndex] as ISimulariumFile;
                     this.setState({
                         simulariumFile: {
                             data: simulariumFile,
@@ -327,19 +271,11 @@ class Viewer extends React.Component<InputParams, ViewerState> {
     public async loadUiTemplates(): Promise<{
         [key: string]: BaseType | CustomType;
     }> {
-        const baseTypes = await fetch(
-            `${UI_TEMPLATE_DOWNLOAD_URL_ROOT}/${UI_BASE_TYPES}`
-        ).then((data) => data.json());
-        const customTypes = await fetch(
-            `${UI_TEMPLATE_URL_ROOT}/${UI_CUSTOM_TYPES}`
-        )
+        const baseTypes = await fetch(`${UI_TEMPLATE_DOWNLOAD_URL_ROOT}/${UI_BASE_TYPES}`).then((data) => data.json());
+        const customTypes = await fetch(`${UI_TEMPLATE_URL_ROOT}/${UI_CUSTOM_TYPES}`)
             .then((data) => data.json())
             .then((fileRefs) =>
-                Promise.all(
-                    map(fileRefs, (ref) =>
-                        fetch(ref.download_url).then((data) => data.json())
-                    )
-                )
+                Promise.all(map(fileRefs, (ref) => fetch(ref.download_url).then((data) => data.json())))
             );
         const typeMap: {
             [key: string]: BaseType | CustomType;
@@ -364,9 +300,9 @@ class Viewer extends React.Component<InputParams, ViewerState> {
     }
 
     public async loadSmoldynFile() {
-        const smoldynTemplate = await fetch(
-            `${UI_TEMPLATE_DOWNLOAD_URL_ROOT}/${SMOLDYN_TEMPLATE}`
-        ).then((data) => data.json());
+        const smoldynTemplate = await fetch(`${UI_TEMPLATE_DOWNLOAD_URL_ROOT}/${SMOLDYN_TEMPLATE}`).then((data) =>
+            data.json()
+        );
         const templateMap = await this.loadUiTemplates();
 
         this.setState({
@@ -377,10 +313,7 @@ class Viewer extends React.Component<InputParams, ViewerState> {
             },
             serverHealthy: false,
         });
-        simulariumController.checkServerHealth(
-            this.onHealthCheckResponse,
-            this.netConnectionSettings
-        );
+        simulariumController.checkServerHealth(this.onHealthCheckResponse, this.netConnectionSettings);
     }
 
     public convertFile(obj: Record<string, any>, fileType: TrajectoryType) {
@@ -391,11 +324,7 @@ class Viewer extends React.Component<InputParams, ViewerState> {
                 this.clearPendingFile();
             })
             .then(() => {
-                simulariumController.changeFile(
-                    { netConnectionSettings: this.netConnectionSettings, },
-                    fileName,
-                    true,
-                )
+                simulariumController.changeFile({ netConnectionSettings: this.netConnectionSettings }, fileName, true);
             })
             .catch((err) => {
                 console.error(err);
@@ -407,13 +336,9 @@ class Viewer extends React.Component<InputParams, ViewerState> {
     }
 
     public loadFile(trajectoryFile, fileName, geoAssets?) {
-        const simulariumFile = fileName.includes(".simularium")
-            ? trajectoryFile
-            : null;
-        this.setState({ initialPlay: true})
-        return simulariumController
-            .handleFileChange(simulariumFile, fileName, geoAssets)
-            .catch(console.log);
+        const simulariumFile = fileName.includes(".simularium") ? trajectoryFile : null;
+        this.setState({ initialPlay: true });
+        return simulariumController.handleFileChange(simulariumFile, fileName, geoAssets).catch(console.log);
     }
 
     public handleJsonMeshData(jsonData): void {
@@ -436,14 +361,9 @@ class Viewer extends React.Component<InputParams, ViewerState> {
         let currentHiddenAgents = this.state.selectionStateInfo.hiddenAgents;
         let nextHiddenAgents: SelectionEntry[] = [];
         if (currentHiddenAgents.some((a) => a.name === nameToToggle)) {
-            nextHiddenAgents = currentHiddenAgents.filter(
-                (hiddenAgent) => hiddenAgent.name !== nameToToggle
-            );
+            nextHiddenAgents = currentHiddenAgents.filter((hiddenAgent) => hiddenAgent.name !== nameToToggle);
         } else {
-            nextHiddenAgents = [
-                ...currentHiddenAgents,
-                { name: nameToToggle, tags: [] },
-            ];
+            nextHiddenAgents = [...currentHiddenAgents, { name: nameToToggle, tags: [] }];
         }
         this.setState({
             ...this.state,
@@ -455,18 +375,12 @@ class Viewer extends React.Component<InputParams, ViewerState> {
     }
 
     public turnAgentHighlightsOnOff(nameToToggle: string) {
-        let currentHighlightedAgents =
-            this.state.selectionStateInfo.highlightedAgents;
+        let currentHighlightedAgents = this.state.selectionStateInfo.highlightedAgents;
         let nextHighlightedAgents: SelectionEntry[] = [];
         if (currentHighlightedAgents.some((a) => a.name === nameToToggle)) {
-            nextHighlightedAgents = currentHighlightedAgents.filter(
-                (hiddenAgent) => hiddenAgent.name !== nameToToggle
-            );
+            nextHighlightedAgents = currentHighlightedAgents.filter((hiddenAgent) => hiddenAgent.name !== nameToToggle);
         } else {
-            nextHighlightedAgents = [
-                ...currentHighlightedAgents,
-                { name: nameToToggle, tags: [] },
-            ];
+            nextHighlightedAgents = [...currentHighlightedAgents, { name: nameToToggle, tags: [] }];
         }
         this.setState({
             ...this.state,
@@ -496,16 +410,10 @@ class Viewer extends React.Component<InputParams, ViewerState> {
 
     public handleUIDisplayData(uiDisplayData: UIDisplayData): void {
         console.log("uiDisplayData", uiDisplayData);
-        const allTags = uiDisplayData.reduce(
-            (fullArray: string[], subarray) => {
-                fullArray = [
-                    ...fullArray,
-                    ...subarray.displayStates.map((b) => b.id),
-                ];
-                return fullArray;
-            },
-            []
-        );
+        const allTags = uiDisplayData.reduce((fullArray: string[], subarray) => {
+            fullArray = [...fullArray, ...subarray.displayStates.map((b) => b.id)];
+            return fullArray;
+        }, []);
         const uniqueTags: string[] = [...new Set(allTags)];
         if (isEqual(uiDisplayData, this.state.selectionStateInfo.appliedColors)) {
             return;
@@ -513,20 +421,19 @@ class Viewer extends React.Component<InputParams, ViewerState> {
         this.setState({
             particleTypeNames: uiDisplayData.map((a) => a.name),
             particleTypeTags: uniqueTags,
-            selectionStateInfo: {...initialState.selectionStateInfo, appliedColors: uiDisplayData},
+            selectionStateInfo: {
+                ...initialState.selectionStateInfo,
+                appliedColors: uiDisplayData,
+            },
         });
     }
 
     public gotoNextFrame(): void {
-        simulariumController.gotoTime(
-            this.state.currentTime + this.state.timeStep
-        );
+        simulariumController.gotoTime(this.state.currentTime + this.state.timeStep);
     }
 
     public gotoPreviousFrame(): void {
-        simulariumController.gotoTime(
-            this.state.currentTime - this.state.timeStep
-        );
+        simulariumController.gotoTime(this.state.currentTime - this.state.timeStep);
     }
 
     private translateAgent() {
@@ -670,8 +577,7 @@ class Viewer extends React.Component<InputParams, ViewerState> {
             ...this.state,
             selectionStateInfo: {
                 hiddenAgents: this.state.selectionStateInfo.hiddenAgents,
-                highlightedAgents:
-                    this.state.selectionStateInfo.highlightedAgents,
+                highlightedAgents: this.state.selectionStateInfo.highlightedAgents,
                 appliedColors: appliedColors,
             },
         });
@@ -679,9 +585,7 @@ class Viewer extends React.Component<InputParams, ViewerState> {
 
     ////// DOWNLOAD MOVIES PROPS AND FUNCTIONS //////
     public getRecordedMovieTitle = (): string => {
-        return this.state.trajectoryTitle
-            ? this.state.trajectoryTitle
-            : "simularium";
+        return this.state.trajectoryTitle ? this.state.trajectoryTitle : "simularium";
     };
 
     public downloadMovie = (videoBlob: Blob, title?: string) => {
@@ -732,13 +636,9 @@ class Viewer extends React.Component<InputParams, ViewerState> {
                     defaultValue={playbackFile}
                 >
                     <option value={queryStringFile}>{queryStringFile}</option>
-                    <option value="TEST_LIVEMODE_API">
-                        TEST LIVE MODE API
-                    </option>
+                    <option value="TEST_LIVEMODE_API">TEST LIVE MODE API</option>
                     <option value="actin012_3.h5">Actin 12_3</option>
-                    <option value="listeria_rocketbugs_normal_fine_2_filtered.simularium">
-                        listeria 01
-                    </option>
+                    <option value="listeria_rocketbugs_normal_fine_2_filtered.simularium">listeria 01</option>
                     <option value="kinesin002_01.h5">kinesin 002</option>
                     <option value="microtubules038_10.h5">MT 38</option>
                     <option value="microtubules_v2_shrinking.h5">M Tub</option>
@@ -746,33 +646,15 @@ class Viewer extends React.Component<InputParams, ViewerState> {
                     <option value="microtubules30_1.h5">MT 30</option>
                     <option value="endocytosis.simularium">Endocytosis</option>
                     <option value="pc4covid19.simularium">COVIDLUNG</option>
-                    <option value="nanoparticle_wrapping.simularium">
-                        Nanoparticle wrapping
-                    </option>
-                    <option value="smoldyn_min1.simularium">
-                        Smoldyn min1
-                    </option>
-                    <option value="smoldyn_spine.simularium">
-                        Smoldyn spine
-                    </option>
-                    <option value="medyan_Chandrasekaran_2019_UNI_alphaA_0.1_MA_0.675.simularium">
-                        medyan 625
-                    </option>
-                    <option value="medyan_Chandrasekaran_2019_UNI_alphaA_0.1_MA_0.0225.simularium">
-                        medyan 0225
-                    </option>
-                    <option value="springsalad_condensate_formation_Below_Ksp.simularium">
-                        springsalad below ksp
-                    </option>
-                    <option value="springsalad_condensate_formation_At_Ksp.simularium">
-                        springsalad at ksp
-                    </option>
-                    <option value="springsalad_condensate_formation_Above_Ksp.simularium">
-                        springsalad above ksp
-                    </option>
-                    <option value="blood-plasma-1.0.simularium">
-                        blood plasma
-                    </option>
+                    <option value="nanoparticle_wrapping.simularium">Nanoparticle wrapping</option>
+                    <option value="smoldyn_min1.simularium">Smoldyn min1</option>
+                    <option value="smoldyn_spine.simularium">Smoldyn spine</option>
+                    <option value="medyan_Chandrasekaran_2019_UNI_alphaA_0.1_MA_0.675.simularium">medyan 625</option>
+                    <option value="medyan_Chandrasekaran_2019_UNI_alphaA_0.1_MA_0.0225.simularium">medyan 0225</option>
+                    <option value="springsalad_condensate_formation_Below_Ksp.simularium">springsalad below ksp</option>
+                    <option value="springsalad_condensate_formation_At_Ksp.simularium">springsalad at ksp</option>
+                    <option value="springsalad_condensate_formation_Above_Ksp.simularium">springsalad above ksp</option>
+                    <option value="blood-plasma-1.0.simularium">blood plasma</option>
                     <option value="TEST_SINGLE_PDB">TEST SINGLE PDB</option>
                     <option value="TEST_PDB">TEST PDB</option>
                     <option value="TEST_SINGLE_FIBER">TEST SINGLE FIBER</option>
@@ -782,31 +664,15 @@ class Viewer extends React.Component<InputParams, ViewerState> {
                     <option value="TEST_BINDING">TEST BINDING</option>
                 </select>
 
-                <button onClick={() => this.translateAgent()}>
-                    TranslateAgent
-                </button>
-                <button onClick={() => simulariumController.clearFile()}>
-                    Clear
-                </button>
-                <button onClick={() => this.loadSmoldynFile()}>
-                    Load a smoldyn trajectory
-                </button>
+                <button onClick={() => this.translateAgent()}>TranslateAgent</button>
+                <button onClick={() => simulariumController.clearFile()}>Clear</button>
+                <button onClick={() => this.loadSmoldynFile()}>Load a smoldyn trajectory</button>
                 <br />
-                <button onClick={() => simulariumController.resume()}>
-                    Play
-                </button>
-                <button onClick={() => simulariumController.pause()}>
-                    Pause
-                </button>
-                <button onClick={() => simulariumController.stop()}>
-                    stop
-                </button>
-                <button onClick={this.gotoPreviousFrame.bind(this)}>
-                    Previous Frame
-                </button>
-                <button onClick={this.gotoNextFrame.bind(this)}>
-                    Next Frame
-                </button>
+                <button onClick={() => simulariumController.resume()}>Play</button>
+                <button onClick={() => simulariumController.pause()}>Pause</button>
+                <button onClick={() => simulariumController.stop()}>stop</button>
+                <button onClick={this.gotoPreviousFrame.bind(this)}>Previous Frame</button>
+                <button onClick={this.gotoNextFrame.bind(this)}>Next Frame</button>
                 <input
                     name="slider"
                     type="range"
@@ -826,11 +692,7 @@ class Viewer extends React.Component<InputParams, ViewerState> {
                             <label htmlFor={id}>{id}</label>
                             <input
                                 type="checkbox"
-                                onChange={(event) =>
-                                    this.turnAgentsOnOff(
-                                        (event.target as HTMLInputElement).value
-                                    )
-                                }
+                                onChange={(event) => this.turnAgentsOnOff((event.target as HTMLInputElement).value)}
                                 value={id}
                                 checked={
                                     this.state.selectionStateInfo.hiddenAgents.find(
@@ -841,9 +703,7 @@ class Viewer extends React.Component<InputParams, ViewerState> {
                             <input
                                 type="checkbox"
                                 onChange={(event) =>
-                                    this.turnAgentHighlightsOnOff(
-                                        (event.target as HTMLInputElement).value
-                                    )
+                                    this.turnAgentHighlightsOnOff((event.target as HTMLInputElement).value)
                                 }
                                 value={id}
                                 defaultChecked={false}
@@ -853,14 +713,11 @@ class Viewer extends React.Component<InputParams, ViewerState> {
                 })}
                 <button
                     onClick={() => {
-                        let hiddenAgents: { name: string; tags: string[] }[] =
-                            [];
+                        let hiddenAgents: { name: string; tags: string[] }[] = [];
                         if (!this.state.hideAllAgents) {
-                            hiddenAgents = this.state.particleTypeNames.map(
-                                (name) => {
-                                    return { name: name, tags: [] };
-                                }
-                            );
+                            hiddenAgents = this.state.particleTypeNames.map((name) => {
+                                return { name: name, tags: [] };
+                            });
                         }
                         this.setState({
                             ...this.state,
@@ -875,19 +732,12 @@ class Viewer extends React.Component<InputParams, ViewerState> {
                     {this.state.hideAllAgents ? "Show all" : "Hide all"}
                 </button>
                 <br />
-                <button
-                    onClick={() =>
-                        this.setState({ showPaths: !this.state.showPaths })
-                    }
-                >
-                    ShowPaths
-                </button>
+                <button onClick={() => this.setState({ showPaths: !this.state.showPaths })}>ShowPaths</button>
                 <button
                     onClick={() =>
                         this.setState({
                             renderStyle:
-                                this.state.renderStyle ===
-                                RenderStyle.WEBGL1_FALLBACK
+                                this.state.renderStyle === RenderStyle.WEBGL1_FALLBACK
                                     ? RenderStyle.WEBGL2_PREFERRED
                                     : RenderStyle.WEBGL1_FALLBACK,
                         })
@@ -895,19 +745,11 @@ class Viewer extends React.Component<InputParams, ViewerState> {
                 >
                     Switch Render
                 </button>
-                <button onClick={() => simulariumController.resetCamera()}>
-                    Reset camera
-                </button>
-                <button onClick={() => simulariumController.centerCamera()}>
-                    center camera
-                </button>
-                <button onClick={() => simulariumController.reOrientCamera()}>
-                    starting orientation
-                </button>
+                <button onClick={() => simulariumController.resetCamera()}>Reset camera</button>
+                <button onClick={() => simulariumController.centerCamera()}>center camera</button>
+                <button onClick={() => simulariumController.reOrientCamera()}>starting orientation</button>
                 <button onClick={() => simulariumController.zoomIn()}>+</button>
-                <button onClick={() => simulariumController.zoomOut()}>
-                    -
-                </button>
+                <button onClick={() => simulariumController.zoomOut()}>-</button>
                 <button
                     onClick={() => {
                         this.panMode = !this.panMode;
@@ -933,13 +775,7 @@ class Viewer extends React.Component<InputParams, ViewerState> {
                     Camera mode
                 </button>
                 <br />
-                <button
-                    onClick={() =>
-                        simulariumController.getMetrics(
-                            this.netConnectionSettings
-                        )
-                    }
-                >
+                <button onClick={() => simulariumController.getMetrics(this.netConnectionSettings)}>
                     Get available metrics
                 </button>
                 <button onClick={this.downloadFile.bind(this)}>download</button>
@@ -966,10 +802,7 @@ class Viewer extends React.Component<InputParams, ViewerState> {
                 >
                     Get plot data
                 </button>
-                <span>
-                    Tick interval length:{" "}
-                    {simulariumController.tickIntervalLength}
-                </span>
+                <span>Tick interval length: {simulariumController.tickIntervalLength}</span>
                 <br></br>
                 <ColorPicker
                     uiDisplayData={this.state.selectionStateInfo.appliedColors}
@@ -978,24 +811,14 @@ class Viewer extends React.Component<InputParams, ViewerState> {
                     updateAgentColorArray={this.updateAgentColorArray}
                     setColorSelectionInfo={this.setColorSelectionInfo}
                 />
-                <button
-                    onClick={() =>
-                        this.setRecordingEnabled(!this.state.isRecordingEnabled)
-                    }
-                >
-                    {this.state.isRecordingEnabled ? "Disable" : "Enable"}{" "}
-                    Recording
-                </button>
-                {this.state.isRecordingEnabled && (
-                    <RecordMovieComponent
-                        startRecordingHandler={
-                            simulariumController.startRecording
-                        }
-                        stopRecordingHandler={
-                            simulariumController.stopRecording
-                        }
-                    />
-                )}
+                <RecordMovieComponent
+                    startRecordingHandler={simulariumController.startRecording}
+                    stopRecordingHandler={simulariumController.stopRecording}
+                    setRecordingEnabled={() => {
+                        this.setRecordingEnabled(!this.state.isRecordingEnabled);
+                    }}
+                    isRecordingEnabled={this.state.isRecordingEnabled}
+                />
                 <AgentMetadata agentData={this.state.followObjectData} />
                 <div className="viewer-container">
                     <SimulariumViewer
@@ -1008,21 +831,11 @@ class Viewer extends React.Component<InputParams, ViewerState> {
                         simulariumController={simulariumController}
                         onJsonDataArrived={this.handleJsonMeshData}
                         showCameraControls={false}
-                        onTrajectoryFileInfoChanged={this.handleTrajectoryInfo.bind(
-                            this
-                        )}
+                        onTrajectoryFileInfoChanged={this.handleTrajectoryInfo.bind(this)}
                         selectionStateInfo={this.state.selectionStateInfo}
-                        onUIDisplayDataChanged={this.handleUIDisplayData.bind(
-                            this
-                        )}
-                        onRecordedMovie={
-                            this.state.isRecordingEnabled
-                                ? this.onRecordedMovie
-                                : undefined
-                        }
-                        onFollowObjectChanged={this.handleFollowObjectData.bind(
-                            this
-                        )}
+                        onUIDisplayDataChanged={this.handleUIDisplayData.bind(this)}
+                        onRecordedMovie={this.state.isRecordingEnabled ? this.onRecordedMovie : undefined}
+                        onFollowObjectChanged={this.handleFollowObjectData.bind(this)}
                         loadInitialData={true}
                         agentColors={this.state.agentColors}
                         showPaths={this.state.showPaths}
diff --git a/examples/src/api-settings.ts b/examples/src/api-settings.ts
index ff58174c..f71176be 100644
--- a/examples/src/api-settings.ts
+++ b/examples/src/api-settings.ts
@@ -1,12 +1,10 @@
 export const API_URL = "https://fm4o7gwkdd.execute-api.us-west-2.amazonaws.com/v1";
 export const SMOLDYN_TEMPLATE = "smoldyn_data.json";
 
-export const UI_TEMPLATE_URL_ROOT =
-    "https://api.github.com/repos/simularium/simulariumio/contents/ui-templates";
+export const UI_TEMPLATE_URL_ROOT = "https://api.github.com/repos/simularium/simulariumio/contents/ui-templates";
 
-export const UI_TEMPLATE_DOWNLOAD_URL_ROOT = "https://raw.githubusercontent.com/simularium/simulariumio/main/ui-templates";
+export const UI_TEMPLATE_DOWNLOAD_URL_ROOT =
+    "https://raw.githubusercontent.com/simularium/simulariumio/main/ui-templates";
 export const UI_BASE_TYPES = "base_types.json";
 
 export const UI_CUSTOM_TYPES = "custom-types";
-
-
diff --git a/examples/src/constants.ts b/examples/src/constants.ts
new file mode 100644
index 00000000..4d705558
--- /dev/null
+++ b/examples/src/constants.ts
@@ -0,0 +1,19 @@
+export const agentColors: string[] = [
+    "#fee34d",
+    "#f7b232",
+    "#bf5736",
+    "#94a7fc",
+    "#ce8ec9",
+    "#58606c",
+    "#0ba345",
+    "#9267cb",
+    "#81dbe6",
+    "#bd7800",
+    "#bbbb99",
+    "#5b79f0",
+    "#89a500",
+    "#da8692",
+    "#418463",
+    "#9f516c",
+    "#00aabf",
+];
diff --git a/examples/src/index.tsx b/examples/src/index.tsx
index 0fe730eb..d779e133 100644
--- a/examples/src/index.tsx
+++ b/examples/src/index.tsx
@@ -1,15 +1,11 @@
 import React from "react";
 import { createRoot } from "react-dom/client";
 
-import Viewer from './Viewer';
+import Viewer from "./Viewer";
 
 declare const SIMULARIUM_USE_LOCAL_BACKEND: boolean;
 
 const container: HTMLElement | null = document.getElementById("root");
 
 const root = createRoot(container!);
-root.render(
-    <Viewer
-        localBackendServer={SIMULARIUM_USE_LOCAL_BACKEND}
-    />
-);
+root.render(<Viewer localBackendServer={SIMULARIUM_USE_LOCAL_BACKEND} />);
diff --git a/examples/src/simulators/BindingSimulator2D.ts b/examples/src/simulators/BindingSimulator2D.ts
index 60cc9ddd..db1d8251 100644
--- a/examples/src/simulators/BindingSimulator2D.ts
+++ b/examples/src/simulators/BindingSimulator2D.ts
@@ -62,21 +62,11 @@ class BindingInstance extends Circle {
         }
         const angle = random(-Math.PI / 4, Math.PI / 4);
         const center = this.findCenter(this, this.child);
-        const newCirclePosition = this.rotate(
-            this.pos.x,
-            this.pos.y,
-            angle,
-            center
-        );
+        const newCirclePosition = this.rotate(this.pos.x, this.pos.y, angle, center);
         this.setPosition(newCirclePosition[0], newCirclePosition[1]);
         const childPosX = this.child.pos.x + xStep;
         const childPosY = this.child.pos.y + yStep;
-        const childPosAndRotation = this.rotate(
-            childPosX,
-            childPosY,
-            angle,
-            center
-        );
+        const childPosAndRotation = this.rotate(childPosX, childPosY, angle, center);
         this.child.setPosition(childPosAndRotation[0], childPosAndRotation[1]);
     }
 
@@ -85,7 +75,7 @@ class BindingInstance extends Circle {
             return;
         }
         // D(r)≈(4.10901922×10^−3)/r nm^2/s
-        const diffusionCoefficient = 4 * 10**-3 / this.r;
+        const diffusionCoefficient = (4 * 10 ** -3) / this.r;
         const timeFactor = 30;
         const amplitude = Math.sqrt(2 * diffusionCoefficient) * timeFactor;
         let xStep = random(-amplitude, amplitude, true);
@@ -188,17 +178,8 @@ export default class BindingSimulator implements IClientSimulatorImpl {
             const agent = agents[i];
             for (let j = 0; j < agent.count; ++j) {
                 const position: number[] = this.getRandomPointOnSide(i);
-                const circle = new Circle(
-                    new Vector3(...position),
-                    agent.radius
-                );
-                const instance = new BindingInstance(
-                    circle,
-                    agent.id,
-                    agent.partners,
-                    agent.kOn,
-                    agent.kOff
-                );
+                const circle = new Circle(new Vector3(...position), agent.radius);
+                const instance = new BindingInstance(circle, agent.id, agent.partners, agent.kOn, agent.kOff);
                 this.system.insert(instance);
                 this.instances.push(instance);
             }
@@ -216,12 +197,10 @@ export default class BindingSimulator implements IClientSimulatorImpl {
         ];
         points.forEach((point, index) => {
             const nextPoint = points[(index + 1) % points.length];
-            this.system.createLine(
-                new Vector3(point[0], point[1]),
-                new Vector3(nextPoint[0], nextPoint[1]),
-                { isStatic: true }
-            );
-        })
+            this.system.createLine(new Vector3(point[0], point[1]), new Vector3(nextPoint[0], nextPoint[1]), {
+                isStatic: true,
+            });
+        });
     }
 
     private randomFloat(min, max) {
@@ -301,11 +280,7 @@ export default class BindingSimulator implements IClientSimulatorImpl {
             const instance = this.instances[ii];
             agentData.push(VisTypes.ID_VIS_TYPE_DEFAULT); // vis type
             agentData.push(ii); // instance id
-            agentData.push(
-                instance.bound || instance.child
-                    ? 100 + instance.id
-                    : instance.id
-            ); // type
+            agentData.push(instance.bound || instance.child ? 100 + instance.id : instance.id); // type
             agentData.push(instance.pos.x); // x
             agentData.push(instance.pos.y); // y
             agentData.push(0); // z
@@ -374,7 +349,6 @@ export default class BindingSimulator implements IClientSimulatorImpl {
                     y: 0,
                     z: 50,
                 },
-            
             },
             typeMapping: typeMapping,
             spatialUnits: {
diff --git a/examples/src/simulators/CurveSimulator.ts b/examples/src/simulators/CurveSimulator.ts
index 2bda57f4..f11c53e3 100644
--- a/examples/src/simulators/CurveSimulator.ts
+++ b/examples/src/simulators/CurveSimulator.ts
@@ -1,12 +1,5 @@
-import {
-    IClientSimulatorImpl,
-    ClientMessageEnum,
-} from "../../../src/simularium/localSimulators/IClientSimulatorImpl";
-import {
-    EncodedTypeMapping,
-    TrajectoryFileInfo,
-    VisDataMessage,
-} from "../../../src/simularium/types";
+import { IClientSimulatorImpl, ClientMessageEnum } from "../../../src/simularium/localSimulators/IClientSimulatorImpl";
+import { EncodedTypeMapping, TrajectoryFileInfo, VisDataMessage } from "../../../src/simularium/types";
 import VisTypes from "../../../src/simularium/VisTypes";
 import { DEFAULT_CAMERA_SPEC } from "../../../src/constants";
 
@@ -44,11 +37,7 @@ export default class CurveSim implements IClientSimulatorImpl {
         return [x, y, z];
     }
     private randomPtInBox(xmin, xmax, ymin, ymax, zmin, zmax) {
-        return [
-            this.randomFloat(xmin, xmax),
-            this.randomFloat(ymin, ymax),
-            this.randomFloat(zmin, zmax),
-        ];
+        return [this.randomFloat(xmin, xmax), this.randomFloat(ymin, ymax), this.randomFloat(zmin, zmax)];
     }
 
     private makeCurveBundle(nCurves, nPts) {
@@ -102,12 +91,9 @@ export default class CurveSim implements IClientSimulatorImpl {
         const amplitude = 0.05;
         for (let ii = 0; ii < this.nCurves; ++ii) {
             for (let jj = 0; jj < this.nPointsPerCurve; ++jj) {
-                this.curveData[ii * nFloatsPerCurve + jj * 3 + 0] +=
-                    this.randomFloat(-amplitude, amplitude);
-                this.curveData[ii * nFloatsPerCurve + jj * 3 + 1] +=
-                    this.randomFloat(-amplitude, amplitude);
-                this.curveData[ii * nFloatsPerCurve + jj * 3 + 2] +=
-                    this.randomFloat(-amplitude, amplitude);
+                this.curveData[ii * nFloatsPerCurve + jj * 3 + 0] += this.randomFloat(-amplitude, amplitude);
+                this.curveData[ii * nFloatsPerCurve + jj * 3 + 1] += this.randomFloat(-amplitude, amplitude);
+                this.curveData[ii * nFloatsPerCurve + jj * 3 + 2] += this.randomFloat(-amplitude, amplitude);
             }
         }
         // fill agent data.
diff --git a/examples/src/simulators/MetaballSimulator.ts b/examples/src/simulators/MetaballSimulator.ts
index 70fdfa8f..b1d218a7 100644
--- a/examples/src/simulators/MetaballSimulator.ts
+++ b/examples/src/simulators/MetaballSimulator.ts
@@ -1,12 +1,5 @@
-import {
-    IClientSimulatorImpl,
-    ClientMessageEnum,
-} from "../../../src/simularium/localSimulators/IClientSimulatorImpl";
-import {
-    EncodedTypeMapping,
-    TrajectoryFileInfo,
-    VisDataMessage,
-} from "../../../src/simularium/types";
+import { IClientSimulatorImpl, ClientMessageEnum } from "../../../src/simularium/localSimulators/IClientSimulatorImpl";
+import { EncodedTypeMapping, TrajectoryFileInfo, VisDataMessage } from "../../../src/simularium/types";
 import VisTypes from "../../../src/simularium/VisTypes";
 import { GeometryDisplayType } from "../../../src/visGeometry/types";
 
@@ -41,11 +34,7 @@ export default class MetaballSimulator implements IClientSimulatorImpl {
     }
 
     private randomPtInBox(xmin, xmax, ymin, ymax, zmin, zmax) {
-        return [
-            this.randomFloat(xmin, xmax),
-            this.randomFloat(ymin, ymax),
-            this.randomFloat(zmin, zmax),
-        ];
+        return [this.randomFloat(xmin, xmax), this.randomFloat(ymin, ymax), this.randomFloat(zmin, zmax)];
     }
 
     private setupAgents() {
@@ -60,11 +49,7 @@ export default class MetaballSimulator implements IClientSimulatorImpl {
         const agentdim = agentspacing / 2.0;
         for (let i = 0; i < this.nAgents; ++i) {
             // distribute positions in the box along x
-            this.agentPositions.push([
-                mindim + ((i + 1) / (this.nAgents + 1)) * dim,
-                0,
-                0,
-            ]);
+            this.agentPositions.push([mindim + ((i + 1) / (this.nAgents + 1)) * dim, 0, 0]);
             // one agent:
             // make 8 points within a certain box with given radii
             const subpts: number[] = [];
@@ -73,9 +58,7 @@ export default class MetaballSimulator implements IClientSimulatorImpl {
                 // coordinates in object space???
                 // world space??
                 // they will have to be converted to 0-1 space for metaball creation/voxelization
-                subpts.push(
-                    ...this.randomPtInBox(0, agentdim, 0, agentdim, 0, agentdim)
-                );
+                subpts.push(...this.randomPtInBox(0, agentdim, 0, agentdim, 0, agentdim));
                 //                subpts.push(...this.randomPtInBox(-2, 2, -2, 2, -2, 2));
                 // radius
                 subpts.push(this.randomFloat(agentdim * 0.8, agentdim));
diff --git a/examples/src/simulators/PdbSimulator.ts b/examples/src/simulators/PdbSimulator.ts
index 29cff7d7..9617537b 100644
--- a/examples/src/simulators/PdbSimulator.ts
+++ b/examples/src/simulators/PdbSimulator.ts
@@ -1,12 +1,5 @@
-import {
-    IClientSimulatorImpl,
-    ClientMessageEnum,
-} from "../../../src/simularium/localSimulators/IClientSimulatorImpl";
-import {
-    EncodedTypeMapping,
-    TrajectoryFileInfo,
-    VisDataMessage,
-} from "../../../src/simularium/types";
+import { IClientSimulatorImpl, ClientMessageEnum } from "../../../src/simularium/localSimulators/IClientSimulatorImpl";
+import { EncodedTypeMapping, TrajectoryFileInfo, VisDataMessage } from "../../../src/simularium/types";
 import VisTypes from "../../../src/simularium/VisTypes";
 import { GeometryDisplayType } from "../../../src/visGeometry/types";
 
@@ -47,11 +40,7 @@ export default class PdbSim implements IClientSimulatorImpl {
         return [x, y, z];
     }
     private randomPtInBox(xmin, xmax, ymin, ymax, zmin, zmax) {
-        return [
-            this.randomFloat(xmin, xmax),
-            this.randomFloat(ymin, ymax),
-            this.randomFloat(zmin, zmax),
-        ];
+        return [this.randomFloat(xmin, xmax), this.randomFloat(ymin, ymax), this.randomFloat(zmin, zmax)];
     }
 
     private makePoints(nPoints) {
@@ -78,18 +67,9 @@ export default class PdbSim implements IClientSimulatorImpl {
         const amplitude = this.size[0] * 0.01;
         // fill agent data.
         for (let i = 0; i < this.nPoints; ++i) {
-            this.pointsData[i * 3 + 0] += this.randomFloat(
-                -amplitude,
-                amplitude
-            );
-            this.pointsData[i * 3 + 1] += this.randomFloat(
-                -amplitude,
-                amplitude
-            );
-            this.pointsData[i * 3 + 2] += this.randomFloat(
-                -amplitude,
-                amplitude
-            );
+            this.pointsData[i * 3 + 0] += this.randomFloat(-amplitude, amplitude);
+            this.pointsData[i * 3 + 1] += this.randomFloat(-amplitude, amplitude);
+            this.pointsData[i * 3 + 2] += this.randomFloat(-amplitude, amplitude);
 
             this.agentdata[i * 11 + 0] = VisTypes.ID_VIS_TYPE_DEFAULT; // vis type
             this.agentdata[i * 11 + 1] = i; // instance id
@@ -132,26 +112,8 @@ export default class PdbSim implements IClientSimulatorImpl {
             "https://aics-simularium-data.s3.us-east-2.amazonaws.com/meshes/obj/tubA.pdb",
             "https://aics-simularium-data.s3.us-east-2.amazonaws.com/meshes/obj/tubB.pdb",
         ];
-        const names = [
-            "4V40",
-            "7DAM",
-            "7PWD",
-            "actin",
-            "arp2",
-            "arp3",
-            "tubA",
-            "tubB",
-        ];
-        const colors = [
-            "ff0000",
-            "00ff00",
-            "0000ff",
-            "ffff00",
-            "ff00ff",
-            "00ffff",
-            "ffffff",
-            "888888",
-        ];
+        const names = ["4V40", "7DAM", "7PWD", "actin", "arp2", "arp3", "tubA", "tubB"];
+        const colors = ["ff0000", "00ff00", "0000ff", "ffff00", "ff00ff", "00ffff", "ffffff", "888888"];
 
         const typeMapping: EncodedTypeMapping = {};
         for (let i = 0; i < this.nTypes; ++i) {
@@ -186,9 +148,7 @@ export default class PdbSim implements IClientSimulatorImpl {
                     z:
                         // set a z value that will roughly frame the bounding box within our camera field of view
                         Math.sqrt(
-                            this.size[0] * this.size[0] +
-                                this.size[1] * this.size[1] +
-                                this.size[2] * this.size[2]
+                            this.size[0] * this.size[0] + this.size[1] * this.size[1] + this.size[2] * this.size[2]
                         ) * Math.tan(0.5 * FOV_DEGREES * DEGREES_TO_RADIANS),
                 },
                 lookAtPosition: {
diff --git a/examples/src/simulators/PointSimulator.ts b/examples/src/simulators/PointSimulator.ts
index 57bdf37f..1df4b9c8 100644
--- a/examples/src/simulators/PointSimulator.ts
+++ b/examples/src/simulators/PointSimulator.ts
@@ -1,12 +1,5 @@
-import {
-    IClientSimulatorImpl,
-    ClientMessageEnum,
-} from "../../../src/simularium/localSimulators/IClientSimulatorImpl";
-import {
-    EncodedTypeMapping,
-    TrajectoryFileInfo,
-    VisDataMessage,
-} from "../../../src/simularium/types";
+import { IClientSimulatorImpl, ClientMessageEnum } from "../../../src/simularium/localSimulators/IClientSimulatorImpl";
+import { EncodedTypeMapping, TrajectoryFileInfo, VisDataMessage } from "../../../src/simularium/types";
 import VisTypes from "../../../src/simularium/VisTypes";
 import { DEFAULT_CAMERA_SPEC } from "../../../src/constants";
 
@@ -42,11 +35,7 @@ export default class PointSim implements IClientSimulatorImpl {
         return [x, y, z];
     }
     private randomPtInBox(xmin, xmax, ymin, ymax, zmin, zmax) {
-        return [
-            this.randomFloat(xmin, xmax),
-            this.randomFloat(ymin, ymax),
-            this.randomFloat(zmin, zmax),
-        ];
+        return [this.randomFloat(xmin, xmax), this.randomFloat(ymin, ymax), this.randomFloat(zmin, zmax)];
     }
 
     private makePoints(nPoints) {
@@ -65,18 +54,9 @@ export default class PointSim implements IClientSimulatorImpl {
         //const dt_adjusted = dt / 1000;
         const amplitude = 0.05;
         for (let ii = 0; ii < this.nPoints; ++ii) {
-            this.pointsData[ii * 3 + 0] += this.randomFloat(
-                -amplitude,
-                amplitude
-            );
-            this.pointsData[ii * 3 + 1] += this.randomFloat(
-                -amplitude,
-                amplitude
-            );
-            this.pointsData[ii * 3 + 2] += this.randomFloat(
-                -amplitude,
-                amplitude
-            );
+            this.pointsData[ii * 3 + 0] += this.randomFloat(-amplitude, amplitude);
+            this.pointsData[ii * 3 + 1] += this.randomFloat(-amplitude, amplitude);
+            this.pointsData[ii * 3 + 2] += this.randomFloat(-amplitude, amplitude);
         }
         // fill agent data.
         const agentData: number[] = [];
diff --git a/examples/src/simulators/PointSimulatorLive.ts b/examples/src/simulators/PointSimulatorLive.ts
index 6538a04d..161b6e28 100644
--- a/examples/src/simulators/PointSimulatorLive.ts
+++ b/examples/src/simulators/PointSimulatorLive.ts
@@ -1,12 +1,5 @@
-import {
-    IClientSimulatorImpl,
-    ClientMessageEnum,
-} from "../../../src/simularium/localSimulators/IClientSimulatorImpl";
-import {
-    EncodedTypeMapping,
-    TrajectoryFileInfo,
-    VisDataMessage,
-} from "../../../src/simularium/types";
+import { IClientSimulatorImpl, ClientMessageEnum } from "../../../src/simularium/localSimulators/IClientSimulatorImpl";
+import { EncodedTypeMapping, TrajectoryFileInfo, VisDataMessage } from "../../../src/simularium/types";
 import VisTypes from "../../../src/simularium/VisTypes";
 import { DEFAULT_CAMERA_SPEC } from "../../../src/constants";
 
@@ -42,11 +35,7 @@ export default class PointSimLive implements IClientSimulatorImpl {
         return [x, y, z];
     }
     private randomPtInBox(xmin, xmax, ymin, ymax, zmin, zmax) {
-        return [
-            this.randomFloat(xmin, xmax),
-            this.randomFloat(ymin, ymax),
-            this.randomFloat(zmin, zmax),
-        ];
+        return [this.randomFloat(xmin, xmax), this.randomFloat(ymin, ymax), this.randomFloat(zmin, zmax)];
     }
 
     private makePoints(nPoints) {
@@ -93,18 +82,9 @@ export default class PointSimLive implements IClientSimulatorImpl {
         //const dt_adjusted = dt / 1000;
         const amplitude = 0.15;
         for (let ii = 0; ii < this.nPoints; ++ii) {
-            this.pointsData[ii * 3 + 0] += this.randomFloat(
-                -amplitude,
-                amplitude
-            );
-            this.pointsData[ii * 3 + 1] += this.randomFloat(
-                -amplitude,
-                amplitude
-            );
-            this.pointsData[ii * 3 + 2] += this.randomFloat(
-                -amplitude,
-                amplitude
-            );
+            this.pointsData[ii * 3 + 0] += this.randomFloat(-amplitude, amplitude);
+            this.pointsData[ii * 3 + 1] += this.randomFloat(-amplitude, amplitude);
+            this.pointsData[ii * 3 + 2] += this.randomFloat(-amplitude, amplitude);
         }
         // fill agent data.
         const agentData: number[] = [];
diff --git a/examples/src/simulators/SingleCurveSimulator.ts b/examples/src/simulators/SingleCurveSimulator.ts
index 1de1517e..d9b1bd6e 100644
--- a/examples/src/simulators/SingleCurveSimulator.ts
+++ b/examples/src/simulators/SingleCurveSimulator.ts
@@ -1,12 +1,5 @@
-import {
-    IClientSimulatorImpl,
-    ClientMessageEnum,
-} from "../../../src/simularium/localSimulators/IClientSimulatorImpl";
-import {
-    EncodedTypeMapping,
-    TrajectoryFileInfo,
-    VisDataMessage,
-} from "../../../src/simularium/types";
+import { IClientSimulatorImpl, ClientMessageEnum } from "../../../src/simularium/localSimulators/IClientSimulatorImpl";
+import { EncodedTypeMapping, TrajectoryFileInfo, VisDataMessage } from "../../../src/simularium/types";
 import VisTypes from "../../../src/simularium/VisTypes";
 import { DEFAULT_CAMERA_SPEC } from "../../../src/constants";
 
@@ -40,11 +33,7 @@ export default class SingleCurveSim implements IClientSimulatorImpl {
         return [x, y, z];
     }
     private randomPtInBox(xmin, xmax, ymin, ymax, zmin, zmax) {
-        return [
-            this.randomFloat(xmin, xmax),
-            this.randomFloat(ymin, ymax),
-            this.randomFloat(zmin, zmax),
-        ];
+        return [this.randomFloat(xmin, xmax), this.randomFloat(ymin, ymax), this.randomFloat(zmin, zmax)];
     }
 
     private makeCurveBundle() {
@@ -79,18 +68,9 @@ export default class SingleCurveSim implements IClientSimulatorImpl {
         //const dt_adjusted = dt / 1000;
         const amplitude = 0.05;
         for (let jj = 0; jj < this.nPointsPerCurve; ++jj) {
-            this.curveData[jj * 3 + 0] += this.randomFloat(
-                -amplitude,
-                amplitude
-            );
-            this.curveData[jj * 3 + 1] += this.randomFloat(
-                -amplitude,
-                amplitude
-            );
-            this.curveData[jj * 3 + 2] += this.randomFloat(
-                -amplitude,
-                amplitude
-            );
+            this.curveData[jj * 3 + 0] += this.randomFloat(-amplitude, amplitude);
+            this.curveData[jj * 3 + 1] += this.randomFloat(-amplitude, amplitude);
+            this.curveData[jj * 3 + 2] += this.randomFloat(-amplitude, amplitude);
         }
         // fill agent data.
         const agentData: number[] = [];
diff --git a/examples/src/simulators/SinglePdbSimulator.ts b/examples/src/simulators/SinglePdbSimulator.ts
index 0565642c..a20ac507 100644
--- a/examples/src/simulators/SinglePdbSimulator.ts
+++ b/examples/src/simulators/SinglePdbSimulator.ts
@@ -1,12 +1,5 @@
-import {
-    IClientSimulatorImpl,
-    ClientMessageEnum,
-} from "../../../src/simularium/localSimulators/IClientSimulatorImpl";
-import {
-    EncodedTypeMapping,
-    TrajectoryFileInfo,
-    VisDataMessage,
-} from "../../../src/simularium/types";
+import { IClientSimulatorImpl, ClientMessageEnum } from "../../../src/simularium/localSimulators/IClientSimulatorImpl";
+import { EncodedTypeMapping, TrajectoryFileInfo, VisDataMessage } from "../../../src/simularium/types";
 import VisTypes from "../../../src/simularium/VisTypes";
 import { GeometryDisplayType } from "../../../src/visGeometry/types";
 
@@ -86,9 +79,7 @@ export default class PdbSim implements IClientSimulatorImpl {
                     z:
                         // set a z value that will roughly frame the bounding box within our camera field of view
                         Math.sqrt(
-                            this.size[0] * this.size[0] +
-                                this.size[1] * this.size[1] +
-                                this.size[2] * this.size[2]
+                            this.size[0] * this.size[0] + this.size[1] * this.size[1] + this.size[2] * this.size[2]
                         ) * Math.tan(0.5 * FOV_DEGREES * DEGREES_TO_RADIANS),
                 },
                 lookAtPosition: {
diff --git a/examples/src/style.css b/examples/src/style.css
new file mode 100644
index 00000000..70ab8856
--- /dev/null
+++ b/examples/src/style.css
@@ -0,0 +1,6 @@
+.ui-container {
+    border: 1px solid black;
+    padding: 6px;
+    border-radius: 6px;
+    width: fit-content;
+}
diff --git a/examples/src/types.ts b/examples/src/types.ts
new file mode 100644
index 00000000..678e1125
--- /dev/null
+++ b/examples/src/types.ts
@@ -0,0 +1,28 @@
+export interface CustomParameters {
+    name: string;
+    data_type: string;
+    description: string;
+    required: boolean;
+    help: string;
+    options?: string[];
+}
+
+export interface BaseType {
+    isBaseType: true;
+    id: string;
+    data: string;
+    match: string;
+}
+
+export interface CustomType {
+    [key: string]: {
+        "python::module": string;
+        "python::object": string;
+        parameters: CustomParameters;
+    };
+}
+
+export interface InputParams {
+    localBackendServer: boolean;
+    useOctopus: boolean;
+}
diff --git a/examples/webpack.dev.js b/examples/webpack.dev.js
index 020ed66d..fe3dfc62 100644
--- a/examples/webpack.dev.js
+++ b/examples/webpack.dev.js
@@ -2,7 +2,7 @@ const HtmlWebpackPlugin = require("html-webpack-plugin");
 const CopyWebpackPlugin = require("copy-webpack-plugin");
 const path = require("path");
 const MiniCssExtractPlugin = require("mini-css-extract-plugin");
-const webpack = require('webpack');
+const webpack = require("webpack");
 
 module.exports = {
     entry: "./src/index.tsx",
@@ -32,7 +32,7 @@ module.exports = {
         }),
     ],
     devServer: {
-        devMiddleware:{
+        devMiddleware: {
             publicPath: "/public/",
         },
         open: ["public/"],
diff --git a/report.json b/report.json
index 72f5065f..267da593 100644
--- a/report.json
+++ b/report.json
@@ -1 +1,13440 @@
-{"numFailedTestSuites":0,"numFailedTests":0,"numPassedTestSuites":6,"numPassedTests":44,"numPendingTestSuites":0,"numPendingTests":0,"numRuntimeErrorTestSuites":0,"numTodoTests":0,"numTotalTestSuites":6,"numTotalTests":44,"openHandles":[],"snapshot":{"added":0,"didUpdate":false,"failure":false,"filesAdded":0,"filesRemoved":0,"filesRemovedList":[],"filesUnmatched":0,"filesUpdated":0,"matched":0,"total":0,"unchecked":0,"uncheckedKeysByFile":[],"unmatched":0,"updated":0},"startTime":1625609816298,"success":true,"testResults":[{"assertionResults":[{"ancestorTitles":["TaskQueue module"],"failureMessages":[],"fullName":"TaskQueue module it resolves tasks that finish synchronously","location":{"column":4,"line":14},"status":"passed","title":"it resolves tasks that finish synchronously"},{"ancestorTitles":["TaskQueue module"],"failureMessages":[],"fullName":"TaskQueue module it resolves all delayed tasks","location":{"column":4,"line":33},"status":"passed","title":"it resolves all delayed tasks"},{"ancestorTitles":["TaskQueue module"],"failureMessages":[],"fullName":"TaskQueue module it handles the case when some tasks reject","location":{"column":4,"line":50},"status":"passed","title":"it handles the case when some tasks reject"},{"ancestorTitles":["TaskQueue module"],"failureMessages":[],"fullName":"TaskQueue module it handles the case when some delayed tasks reject","location":{"column":4,"line":74},"status":"passed","title":"it handles the case when some delayed tasks reject"},{"ancestorTitles":["TaskQueue module"],"failureMessages":[],"fullName":"TaskQueue module it handles the case when some tasks throw","location":{"column":4,"line":100},"status":"passed","title":"it handles the case when some tasks throw"},{"ancestorTitles":["TaskQueue module"],"failureMessages":[],"fullName":"TaskQueue module it can run tasks that resolve over time","location":{"column":4,"line":124},"status":"passed","title":"it can run tasks that resolve over time"},{"ancestorTitles":["TaskQueue module"],"failureMessages":[],"fullName":"TaskQueue module it can cancel tasks not already started","location":{"column":4,"line":143},"status":"passed","title":"it can cancel tasks not already started"},{"ancestorTitles":["TaskQueue module"],"failureMessages":[],"fullName":"TaskQueue module it can queue new tasks after cancelling","location":{"column":4,"line":176},"status":"passed","title":"it can queue new tasks after cancelling"}],"endTime":1625609827332,"message":"","name":"/Users/meganriel-mehan/dev/allen-inst/agentviz-viewer/src/test/TaskQueue.test.ts","startTime":1625609817419,"status":"passed","summary":""},{"assertionResults":[{"ancestorTitles":["VisData module","VisData parse"],"failureMessages":[],"fullName":"VisData module VisData parse it returns an array of objects of agent data and time stamp data","location":{"column":8,"line":126},"status":"passed","title":"it returns an array of objects of agent data and time stamp data"},{"ancestorTitles":["VisData module","VisData parse"],"failureMessages":[],"fullName":"VisData module VisData parse it throws an error if number of supoints does not match the nSubpoints value","location":{"column":8,"line":179},"status":"passed","title":"it throws an error if number of supoints does not match the nSubpoints value"},{"ancestorTitles":["VisData module","VisData parse"],"failureMessages":[],"fullName":"VisData module VisData parse currentFrame returns empty frame when cache is empty","location":{"column":8,"line":247},"status":"passed","title":"currentFrame returns empty frame when cache is empty"},{"ancestorTitles":["VisData module","VisData parse"],"failureMessages":[],"fullName":"VisData module VisData parse can request frame from a cache size of 1","location":{"column":8,"line":252},"status":"passed","title":"can request frame from a cache size of 1"},{"ancestorTitles":["VisData module","VisData parse"],"failureMessages":[],"fullName":"VisData module VisData parse parses 5 frame bundle correctly","location":{"column":8,"line":290},"status":"passed","title":"parses 5 frame bundle correctly"},{"ancestorTitles":["VisData module","VisData parse"],"failureMessages":[],"fullName":"VisData module VisData parse can find frames in cache by time","location":{"column":8,"line":303},"status":"passed","title":"can find frames in cache by time"}],"endTime":1625609853802,"message":"","name":"/Users/meganriel-mehan/dev/allen-inst/agentviz-viewer/src/test/VisData.test.ts","startTime":1625609817502,"status":"passed","summary":""},{"assertionResults":[{"ancestorTitles":["SelectionInterface module","Handles Input"],"failureMessages":[],"fullName":"SelectionInterface module Handles Input Can decode valid encoded input","location":{"column":8,"line":22},"status":"passed","title":"Can decode valid encoded input"},{"ancestorTitles":["SelectionInterface module","Handles Input"],"failureMessages":[],"fullName":"SelectionInterface module Handles Input Can decode valid untagged input","location":{"column":8,"line":32},"status":"passed","title":"Can decode valid untagged input"},{"ancestorTitles":["SelectionInterface module","Handles Input"],"failureMessages":[],"fullName":"SelectionInterface module Handles Input Validates input: empty name","location":{"column":8,"line":40},"status":"passed","title":"Validates input: empty name"},{"ancestorTitles":["SelectionInterface module","Parsing"],"failureMessages":[],"fullName":"SelectionInterface module Parsing Parse id-name mapping","location":{"column":8,"line":50},"status":"passed","title":"Parse id-name mapping"},{"ancestorTitles":["SelectionInterface module","getIds"],"failureMessages":[],"fullName":"SelectionInterface module getIds it returns id matching name","location":{"column":8,"line":64},"status":"passed","title":"it returns id matching name"},{"ancestorTitles":["SelectionInterface module","getIds"],"failureMessages":[],"fullName":"SelectionInterface module getIds it returns multiple ids that all have the same name","location":{"column":8,"line":72},"status":"passed","title":"it returns multiple ids that all have the same name"},{"ancestorTitles":["SelectionInterface module","getIds"],"failureMessages":[],"fullName":"SelectionInterface module getIds it returns ids that match both & multiple tags (Union)","location":{"column":8,"line":79},"status":"passed","title":"it returns ids that match both & multiple tags (Union)"},{"ancestorTitles":["SelectionInterface module","getIds"],"failureMessages":[],"fullName":"SelectionInterface module getIds it returns id for names with no tag if passed an empty string","location":{"column":8,"line":85},"status":"passed","title":"it returns id for names with no tag if passed an empty string"},{"ancestorTitles":["SelectionInterface module","getIds"],"failureMessages":[],"fullName":"SelectionInterface module getIds it returns an empty array if there is no matching name","location":{"column":8,"line":91},"status":"passed","title":"it returns an empty array if there is no matching name"},{"ancestorTitles":["SelectionInterface module","getIds"],"failureMessages":[],"fullName":"SelectionInterface module getIds it returns an empty array if matching name and tag combination","location":{"column":8,"line":97},"status":"passed","title":"it returns an empty array if matching name and tag combination"},{"ancestorTitles":["SelectionInterface module","getIdsByTags"],"failureMessages":[],"fullName":"SelectionInterface module getIdsByTags Selection: select ids by tag","location":{"column":8,"line":106},"status":"passed","title":"Selection: select ids by tag"},{"ancestorTitles":["SelectionInterface module","getIdsByTags"],"failureMessages":[],"fullName":"SelectionInterface module getIdsByTags Selection: select multiple by tag","location":{"column":8,"line":114},"status":"passed","title":"Selection: select multiple by tag"},{"ancestorTitles":["SelectionInterface module","getIdsByTags"],"failureMessages":[],"fullName":"SelectionInterface module getIdsByTags Selection: select by multiple tags","location":{"column":8,"line":122},"status":"passed","title":"Selection: select by multiple tags"},{"ancestorTitles":["SelectionInterface module","getHighlightedIds"],"failureMessages":[],"fullName":"SelectionInterface module getHighlightedIds Highlight: highlight multiple by name","location":{"column":8,"line":132},"status":"passed","title":"Highlight: highlight multiple by name"},{"ancestorTitles":["SelectionInterface module","getHighlightedIds"],"failureMessages":[],"fullName":"SelectionInterface module getHighlightedIds Highlight: highlight only unmodified states","location":{"column":8,"line":151},"status":"passed","title":"Highlight: highlight only unmodified states"},{"ancestorTitles":["SelectionInterface module","getHighlightedIds"],"failureMessages":[],"fullName":"SelectionInterface module getHighlightedIds Highlight: highlight combination of modified and unmodified states","location":{"column":8,"line":167},"status":"passed","title":"Highlight: highlight combination of modified and unmodified states"},{"ancestorTitles":["SelectionInterface module","getHighlightedIds"],"failureMessages":[],"fullName":"SelectionInterface module getHighlightedIds it returns an empty array if no name and tag matches","location":{"column":8,"line":184},"status":"passed","title":"it returns an empty array if no name and tag matches"},{"ancestorTitles":["SelectionInterface module","getHiddenIds"],"failureMessages":[],"fullName":"SelectionInterface module getHiddenIds Hiding: hide multiple by name","location":{"column":8,"line":198},"status":"passed","title":"Hiding: hide multiple by name"},{"ancestorTitles":["SelectionInterface module","getHiddenIds"],"failureMessages":[],"fullName":"SelectionInterface module getHiddenIds Hiding: hide by name & tags","location":{"column":8,"line":213},"status":"passed","title":"Hiding: hide by name & tags"},{"ancestorTitles":["SelectionInterface module","getHiddenIds"],"failureMessages":[],"fullName":"SelectionInterface module getHiddenIds Hiding: hide by name & null tag","location":{"column":8,"line":227},"status":"passed","title":"Hiding: hide by name & null tag"},{"ancestorTitles":["SelectionInterface module","UI Display Data"],"failureMessages":[],"fullName":"SelectionInterface module UI Display Data Doesn't crash","location":{"column":8,"line":245},"status":"passed","title":"Doesn't crash"}],"endTime":1625609853891,"message":"","name":"/Users/meganriel-mehan/dev/allen-inst/agentviz-viewer/src/test/SelectionInterface.test.ts","startTime":1625609827388,"status":"passed","summary":""},{"assertionResults":[{"ancestorTitles":["util","compareTimes"],"failureMessages":[],"fullName":"util compareTimes it correctly determines time1 > time2","location":{"column":8,"line":7},"status":"passed","title":"it correctly determines time1 > time2"},{"ancestorTitles":["util","compareTimes"],"failureMessages":[],"fullName":"util compareTimes it correctly determines time1 < time2","location":{"column":8,"line":16},"status":"passed","title":"it correctly determines time1 < time2"},{"ancestorTitles":["util","compareTimes"],"failureMessages":[],"fullName":"util compareTimes it correctly determines time1 ~= time2 when time1 is slightly greater","location":{"column":8,"line":25},"status":"passed","title":"it correctly determines time1 ~= time2 when time1 is slightly greater"},{"ancestorTitles":["util","compareTimes"],"failureMessages":[],"fullName":"util compareTimes it correctly determines time1 ~= time2 when time1 is slightly less","location":{"column":8,"line":34},"status":"passed","title":"it correctly determines time1 ~= time2 when time1 is slightly less"},{"ancestorTitles":["util","compareTimes"],"failureMessages":[],"fullName":"util compareTimes it correctly determines time1 ~= time2 when numbers are 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+}
diff --git a/src/constants.ts b/src/constants.ts
index 3d12b4b8..bc46257d 100644
--- a/src/constants.ts
+++ b/src/constants.ts
@@ -1,8 +1,4 @@
-import {
-    AgentData,
-    CameraSpec,
-    PerspectiveCameraSpec,
-} from "./simularium/types";
+import { AgentData, CameraSpec, PerspectiveCameraSpec } from "./simularium/types";
 
 export const DEFAULT_CAMERA_Z_POSITION = 120;
 export const DEFAULT_CAMERA_SPEC_PERSPECTIVE: PerspectiveCameraSpec = {
diff --git a/src/controller/index.ts b/src/controller/index.ts
index c8ddf2d6..93f3caf3 100644
--- a/src/controller/index.ts
+++ b/src/controller/index.ts
@@ -3,12 +3,7 @@ import { isEmpty, noop } from "lodash";
 import { VisData, RemoteSimulator } from "../simularium";
 import type { NetConnectionParams, TrajectoryFileInfo } from "../simularium";
 import { VisGeometry } from "../visGeometry";
-import {
-    FileReturn,
-    FILE_STATUS_SUCCESS,
-    FILE_STATUS_FAIL,
-    PlotConfig,
-} from "../simularium/types";
+import { FileReturn, FILE_STATUS_SUCCESS, FILE_STATUS_FAIL, PlotConfig } from "../simularium/types";
 
 import { ClientSimulator } from "../simularium/ClientSimulator";
 import { IClientSimulatorImpl } from "../simularium/localSimulators/IClientSimulatorImpl";
@@ -71,22 +66,14 @@ export default class SimulariumController {
         // TODO: change test so controller isn't initialized with a remoteSimulator
         if (params.remoteSimulator) {
             this.simulator = params.remoteSimulator;
-            this.simulator.setTrajectoryFileInfoHandler(
-                (trajFileInfo: TrajectoryFileInfo) => {
-                    this.handleTrajectoryInfo(trajFileInfo);
-                }
-            );
-            this.simulator.setTrajectoryDataHandler(
-                this.visData.parseAgentsFromNetData.bind(this.visData)
-            );
+            this.simulator.setTrajectoryFileInfoHandler((trajFileInfo: TrajectoryFileInfo) => {
+                this.handleTrajectoryInfo(trajFileInfo);
+            });
+            this.simulator.setTrajectoryDataHandler(this.visData.parseAgentsFromNetData.bind(this.visData));
             // TODO: probably remove this? We're never initalizing the controller
             // with any settings on the website.
         } else if (params.netConnectionSettings) {
-            this.createSimulatorConnection(
-                params.netConnectionSettings,
-                undefined,
-                undefined
-            );
+            this.createSimulatorConnection(params.netConnectionSettings, undefined, undefined);
         } else {
             // No network information was passed in
             //  the viewer will be initialized blank
@@ -95,9 +82,7 @@ export default class SimulariumController {
 
             // @TODO: Pass this warning upwards (to installing app)
             if (params.trajectoryPlaybackFile) {
-                console.warn(
-                    "trajectoryPlaybackFile param ignored, no network config provided"
-                );
+                console.warn("trajectoryPlaybackFile param ignored, no network config provided");
             }
         }
 
@@ -124,42 +109,26 @@ export default class SimulariumController {
     ): void {
         if (clientSimulator) {
             this.simulator = new ClientSimulator(clientSimulator);
-            this.simulator.setTrajectoryDataHandler(
-                this.visData.parseAgentsFromNetData.bind(this.visData)
-            );
+            this.simulator.setTrajectoryDataHandler(this.visData.parseAgentsFromNetData.bind(this.visData));
         } else if (localFile) {
-            this.simulator = new LocalFileSimulator(
-                this.playBackFile,
-                localFile
-            );
+            this.simulator = new LocalFileSimulator(this.playBackFile, localFile);
             if (this.visGeometry && geoAssets && !isEmpty(geoAssets)) {
                 this.visGeometry.geometryStore.cacheLocalAssets(geoAssets);
             }
-            this.simulator.setTrajectoryDataHandler(
-                this.visData.parseAgentsFromFrameData.bind(this.visData)
-            );
+            this.simulator.setTrajectoryDataHandler(this.visData.parseAgentsFromFrameData.bind(this.visData));
         } else if (netConnectionConfig) {
-            const webSocketClient = new WebsocketClient(
-                netConnectionConfig,
-                this.onError
-            );
+            const webSocketClient = new WebsocketClient(netConnectionConfig, this.onError);
             this.remoteWebsocketClient = webSocketClient;
             this.simulator = new RemoteSimulator(webSocketClient, this.onError);
-            this.simulator.setTrajectoryDataHandler(
-                this.visData.parseAgentsFromNetData.bind(this.visData)
-            );
+            this.simulator.setTrajectoryDataHandler(this.visData.parseAgentsFromNetData.bind(this.visData));
         } else {
             // caught in try/catch block, not sent to front end
-            throw new Error(
-                "Insufficient data to determine and configure simulator connection"
-            );
+            throw new Error("Insufficient data to determine and configure simulator connection");
         }
 
-        this.simulator.setTrajectoryFileInfoHandler(
-            (trajFileInfo: TrajectoryFileInfo) => {
-                this.handleTrajectoryInfo(trajFileInfo);
-            }
-        );
+        this.simulator.setTrajectoryFileInfoHandler((trajFileInfo: TrajectoryFileInfo) => {
+            this.handleTrajectoryInfo(trajFileInfo);
+        });
     }
 
     public configureNetwork(config: NetConnectionParams): void {
@@ -178,19 +147,13 @@ export default class SimulariumController {
     // parent app
     public connect(): Promise<string> {
         if (!this.simulator) {
-            return Promise.reject(
-                new Error(
-                    "No network connection established in simularium controller."
-                )
-            );
+            return Promise.reject(new Error("No network connection established in simularium controller."));
         }
 
-        return this.simulator
-            .connectToRemoteServer(this.simulator.getIp())
-            .then((msg: string) => {
-                this.postConnect();
-                return msg;
-            });
+        return this.simulator.connectToRemoteServer(this.simulator.getIp()).then((msg: string) => {
+            this.postConnect();
+            return msg;
+        });
     }
 
     public start(): Promise<void> {
@@ -229,9 +192,7 @@ export default class SimulariumController {
         providedFileName?: string
     ): Promise<void> {
         try {
-            if (
-                !(this.simulator && this.simulator.isConnectedToRemoteServer())
-            ) {
+            if (!(this.simulator && this.simulator.isConnectedToRemoteServer())) {
                 // Only configure network if we aren't already connected to the remote server
                 this.configureNetwork(netConnectionConfig);
             }
@@ -242,11 +203,7 @@ export default class SimulariumController {
             return Promise.reject(e);
         }
 
-        return this.simulator.convertTrajectory(
-            dataToConvert,
-            fileType,
-            providedFileName
-        );
+        return this.simulator.convertTrajectory(dataToConvert, fileType, providedFileName);
     }
 
     public pause(): void {
@@ -348,9 +305,7 @@ export default class SimulariumController {
 
         // don't create simulator if client wants to keep remote simulator and the
         // current simulator is a remote simulator
-        if (
-            !(keepRemoteConnection && this.simulator instanceof RemoteSimulator)
-        ) {
+        if (!(keepRemoteConnection && this.simulator instanceof RemoteSimulator)) {
             try {
                 if (connectionParams) {
                     this.createSimulatorConnection(
@@ -400,10 +355,7 @@ export default class SimulariumController {
         return this.playBackFile;
     }
 
-    public checkServerHealth(
-        handler: () => void,
-        netConnectionConfig: NetConnectionParams
-    ): void {
+    public checkServerHealth(handler: () => void, netConnectionConfig: NetConnectionParams): void {
         if (!(this.simulator && this.simulator.isConnectedToRemoteServer())) {
             // Only configure network if we aren't already connected to the remote server
             this.configureNetwork(netConnectionConfig);
@@ -421,58 +373,38 @@ export default class SimulariumController {
         }
     }
 
-    private setupMetricsCalculator(
-        config: NetConnectionParams
-    ): RemoteMetricsCalculator {
+    private setupMetricsCalculator(config: NetConnectionParams): RemoteMetricsCalculator {
         const webSocketClient =
-            this.remoteWebsocketClient &&
-            this.remoteWebsocketClient.socketIsValid()
+            this.remoteWebsocketClient && this.remoteWebsocketClient.socketIsValid()
                 ? this.remoteWebsocketClient
                 : new WebsocketClient(config, this.onError);
         return new RemoteMetricsCalculator(webSocketClient, this.onError);
     }
 
     public async getMetrics(config: NetConnectionParams): Promise<void> {
-        if (
-            !this.metricsCalculator ||
-            !this.metricsCalculator.socketIsValid()
-        ) {
+        if (!this.metricsCalculator || !this.metricsCalculator.socketIsValid()) {
             this.metricsCalculator = this.setupMetricsCalculator(config);
             await this.metricsCalculator.connectToRemoteServer();
         }
         this.metricsCalculator.getAvailableMetrics();
     }
 
-    public async getPlotData(
-        config: NetConnectionParams,
-        requestedPlots: PlotConfig[]
-    ): Promise<void> {
+    public async getPlotData(config: NetConnectionParams, requestedPlots: PlotConfig[]): Promise<void> {
         if (!this.simulator) {
             return;
         }
 
-        if (
-            !this.metricsCalculator ||
-            !this.metricsCalculator.socketIsValid()
-        ) {
+        if (!this.metricsCalculator || !this.metricsCalculator.socketIsValid()) {
             this.metricsCalculator = this.setupMetricsCalculator(config);
             await this.metricsCalculator.connectToRemoteServer();
         }
 
         if (this.simulator instanceof LocalFileSimulator) {
-            const simulariumFile: ISimulariumFile =
-                this.simulator.getSimulariumFile();
-            this.metricsCalculator.getPlotData(
-                simulariumFile["simulariumFile"],
-                requestedPlots
-            );
+            const simulariumFile: ISimulariumFile = this.simulator.getSimulariumFile();
+            this.metricsCalculator.getPlotData(simulariumFile["simulariumFile"], requestedPlots);
         } else if (this.simulator instanceof RemoteSimulator) {
             // we don't have the simularium file, so we'll just send an empty data object
-            this.metricsCalculator.getPlotData(
-                {},
-                requestedPlots,
-                this.simulator.getLastRequestedFile()
-            );
+            this.metricsCalculator.getPlotData({}, requestedPlots, this.simulator.getLastRequestedFile());
         }
     }
 
@@ -488,9 +420,7 @@ export default class SimulariumController {
         this.visData.clearCache();
     }
 
-    public set trajFileInfoCallback(
-        callback: (msg: TrajectoryFileInfo) => void
-    ) {
+    public set trajFileInfoCallback(callback: (msg: TrajectoryFileInfo) => void) {
         this.handleTrajectoryInfo = callback;
         if (this.simulator) {
             this.simulator.setTrajectoryFileInfoHandler(callback);
diff --git a/src/index.ts b/src/index.ts
index 19b33ec7..64a26029 100644
--- a/src/index.ts
+++ b/src/index.ts
@@ -18,14 +18,7 @@ export type { TimeData } from "./viewport";
 export { GeometryDisplayType } from "./visGeometry/types";
 export { RenderStyle } from "./viewport";
 export { SimulariumController } from "./controller";
-export {
-    Orchestrator,
-    RemoteSimulator,
-    ErrorLevel,
-    FrontEndError,
-    VisTypes,
-    ClientMessageEnum,
-} from "./simularium";
+export { Orchestrator, RemoteSimulator, ErrorLevel, FrontEndError, VisTypes, ClientMessageEnum } from "./simularium";
 export { compareTimes, loadSimulariumFile } from "./util";
 export { DEFAULT_CAMERA_SPEC } from "./constants";
 
diff --git a/src/simularium/BinaryFileReader.ts b/src/simularium/BinaryFileReader.ts
index 0e41cc15..213a8624 100644
--- a/src/simularium/BinaryFileReader.ts
+++ b/src/simularium/BinaryFileReader.ts
@@ -71,13 +71,9 @@ export default class BinaryFileReader implements ISimulariumFile {
 
                 // Frame offsets,sizes (Number of frames * two 4-byte ints)
                 for (let i = 0; i < this.nFrames; i++) {
-                    this.frameOffsets.push(
-                        blockData.getUint32(byteOffset, true)
-                    );
+                    this.frameOffsets.push(blockData.getUint32(byteOffset, true));
                     byteOffset += 4;
-                    this.frameLengths.push(
-                        blockData.getUint32(byteOffset, true)
-                    );
+                    this.frameLengths.push(blockData.getUint32(byteOffset, true));
                     byteOffset += 4;
                 }
 
@@ -150,20 +146,10 @@ export default class BinaryFileReader implements ISimulariumFile {
         const blockSize = this.dataView.getUint32(block.offset + 4, true);
 
         if (blockType !== block.type) {
-            throw new Error(
-                "Block type mismatch.  Header says " +
-                    block.type +
-                    " but block says " +
-                    blockType
-            );
+            throw new Error("Block type mismatch.  Header says " + block.type + " but block says " + blockType);
         }
         if (blockSize !== block.size) {
-            throw new Error(
-                "Block size mismatch.  Header says " +
-                    block.size +
-                    " but block says " +
-                    blockSize
-            );
+            throw new Error("Block size mismatch.  Header says " + block.size + " but block says " + blockSize);
         }
         // note: NOT a copy.
         // never produce copies internally. let callers make a copy if they need it.
@@ -184,29 +170,15 @@ export default class BinaryFileReader implements ISimulariumFile {
         const blockSize = this.dataView.getUint32(block.offset + 4, true);
 
         if (blockType !== block.type) {
-            throw new Error(
-                "Block type mismatch.  Header says " +
-                    block.type +
-                    " but block says " +
-                    blockType
-            );
+            throw new Error("Block type mismatch.  Header says " + block.type + " but block says " + blockType);
         }
         if (blockSize !== block.size) {
-            throw new Error(
-                "Block size mismatch.  Header says " +
-                    block.size +
-                    " but block says " +
-                    blockSize
-            );
+            throw new Error("Block size mismatch.  Header says " + block.size + " but block says " + blockSize);
         }
         // note: NOT a copy.
         // never produce copies internally. let callers make a copy if they need it.
         // also note: return the contents of the block NOT including the block header
-        return new DataView(
-            this.fileContents,
-            block.offset + BLOCK_HEADER_SIZE,
-            block.size - BLOCK_HEADER_SIZE
-        );
+        return new DataView(this.fileContents, block.offset + BLOCK_HEADER_SIZE, block.size - BLOCK_HEADER_SIZE);
     }
 
     /* eslint-disable-next-line @typescript-eslint/no-explicit-any */
@@ -236,10 +208,7 @@ export default class BinaryFileReader implements ISimulariumFile {
         for (let i = 0; i < this.nFrames; i++) {
             // get time of frame.
             // const frameNumber = this.spatialDataBlock[frameFloatOffset + 0];
-            const frameTime = this.spatialDataBlock.getFloat32(
-                this.frameOffsets[i] + 4,
-                true
-            );
+            const frameTime = this.spatialDataBlock.getFloat32(this.frameOffsets[i] + 4, true);
             // check time
             if (compareTimes(frameTime, time, timeStepSize) === 0) {
                 // TODO possible sanity check frameNumber === i ?
@@ -256,10 +225,7 @@ export default class BinaryFileReader implements ISimulariumFile {
         const totalOffset = this.spatialDataBlock.byteOffset + frameOffset;
         // TODO possibly this can return a TypedArray or DataView without making a copy
         // but requires a guarantee on 4-byte alignment. Leaving it as a future optimization.
-        const frameContents = this.fileContents.slice(
-            totalOffset,
-            totalOffset + frameSize
-        );
+        const frameContents = this.fileContents.slice(totalOffset, totalOffset + frameSize);
         return frameContents;
     }
 
diff --git a/src/simularium/ClientSimulator.ts b/src/simularium/ClientSimulator.ts
index 01676998..966ed6b3 100644
--- a/src/simularium/ClientSimulator.ts
+++ b/src/simularium/ClientSimulator.ts
@@ -2,11 +2,7 @@ import jsLogger from "js-logger";
 import { ILogger } from "js-logger";
 
 import { VisDataMessage, TrajectoryFileInfo } from "./types";
-import {
-    ClientMessageEnum,
-    ClientPlayBackType,
-    IClientSimulatorImpl,
-} from "./localSimulators/IClientSimulatorImpl";
+import { ClientMessageEnum, ClientPlayBackType, IClientSimulatorImpl } from "./localSimulators/IClientSimulatorImpl";
 import { ISimulator } from "./ISimulator";
 
 // a ClientSimulator is a ISimulator that is expected to run purely in procedural javascript in the browser client,
@@ -34,14 +30,10 @@ export class ClientSimulator implements ISimulator {
         this.localSimulator = sim;
     }
 
-    public setTrajectoryFileInfoHandler(
-        handler: (msg: TrajectoryFileInfo) => void
-    ): void {
+    public setTrajectoryFileInfoHandler(handler: (msg: TrajectoryFileInfo) => void): void {
         this.onTrajectoryFileInfoArrive = handler;
     }
-    public setTrajectoryDataHandler(
-        handler: (msg: VisDataMessage) => void
-    ): void {
+    public setTrajectoryDataHandler(handler: (msg: VisDataMessage) => void): void {
         this.onTrajectoryDataArrive = handler;
     }
 
@@ -71,10 +63,7 @@ export class ClientSimulator implements ISimulator {
         return Promise.resolve("Local client sim successfully started");
     }
 
-    private sendSimulationRequest(
-        jsonData: Record<string, unknown>,
-        _requestDescription: string
-    ): void {
+    private sendSimulationRequest(jsonData: Record<string, unknown>, _requestDescription: string): void {
         // do processing, then return!
         //this.logWebSocketRequest(requestDescription, jsonData);
 
@@ -87,21 +76,16 @@ export class ClientSimulator implements ISimulator {
                 break;
             case ClientMessageEnum.ID_UPDATE_SIMULATION_STATE:
                 {
-                    this.localSimulator.updateSimulationState(
-                        jsonData["data"] as Record<string, unknown>
-                    );
+                    this.localSimulator.updateSimulationState(jsonData["data"] as Record<string, unknown>);
                 }
                 break;
             case ClientMessageEnum.ID_VIS_DATA_REQUEST:
                 {
                     if (jsonData["frameNumber"] !== undefined) {
-                        const frame = this.localSimulator.update(
-                            jsonData["frameNumber"] as number
-                        );
+                        const frame = this.localSimulator.update(jsonData["frameNumber"] as number);
                         this.onTrajectoryDataArrive(frame);
                     } else {
-                        const a: TrajectoryFileInfo =
-                            this.localSimulator.getInfo();
+                        const a: TrajectoryFileInfo = this.localSimulator.getInfo();
                         this.onTrajectoryFileInfoArrive(a);
                     }
                 }
@@ -128,9 +112,7 @@ export class ClientSimulator implements ISimulator {
                 break;
             case ClientMessageEnum.ID_GOTO_SIMULATION_TIME:
                 {
-                    const frame = this.localSimulator.update(
-                        jsonData["time"] as number
-                    );
+                    const frame = this.localSimulator.update(jsonData["time"] as number);
                     this.onTrajectoryDataArrive(frame);
                 }
                 break;
@@ -217,10 +199,7 @@ export class ClientSimulator implements ISimulator {
         };
 
         return this.connectToRemoteServer(this.getIp()).then(() => {
-            this.sendSimulationRequest(
-                jsonData,
-                "Start Trajectory File Playback"
-            );
+            this.sendSimulationRequest(jsonData, "Start Trajectory File Playback");
         });
     }
 
@@ -228,30 +207,21 @@ export class ClientSimulator implements ISimulator {
         if (!this.socketIsValid()) {
             return;
         }
-        this.sendSimulationRequest(
-            { msgType: ClientMessageEnum.ID_VIS_DATA_PAUSE },
-            "Pause Simulation"
-        );
+        this.sendSimulationRequest({ msgType: ClientMessageEnum.ID_VIS_DATA_PAUSE }, "Pause Simulation");
     }
 
     public resumeRemoteSim(): void {
         if (!this.socketIsValid()) {
             return;
         }
-        this.sendSimulationRequest(
-            { msgType: ClientMessageEnum.ID_VIS_DATA_RESUME },
-            "Resume Simulation"
-        );
+        this.sendSimulationRequest({ msgType: ClientMessageEnum.ID_VIS_DATA_RESUME }, "Resume Simulation");
     }
 
     public abortRemoteSim(): void {
         if (!this.socketIsValid()) {
             return;
         }
-        this.sendSimulationRequest(
-            { msgType: ClientMessageEnum.ID_VIS_DATA_ABORT },
-            "Abort Simulation"
-        );
+        this.sendSimulationRequest({ msgType: ClientMessageEnum.ID_VIS_DATA_ABORT }, "Abort Simulation");
     }
 
     public requestSingleFrame(startFrameNumber: number): void {
diff --git a/src/simularium/FrameRecorder.ts b/src/simularium/FrameRecorder.ts
index ea2af5f9..525ae4f8 100644
--- a/src/simularium/FrameRecorder.ts
+++ b/src/simularium/FrameRecorder.ts
@@ -21,10 +21,7 @@ export class FrameRecorder {
     public supportedBrowser: boolean;
     private frameRate: number;
 
-    constructor(
-        getCanvas: () => HTMLCanvasElement | null,
-        handleFile: (videoBlob: Blob) => void
-    ) {
+    constructor(getCanvas: () => HTMLCanvasElement | null, handleFile: (videoBlob: Blob) => void) {
         this.getCanvas = getCanvas;
         this.handleFile = handleFile;
         this.encoder = null;
@@ -67,8 +64,7 @@ export class FrameRecorder {
                     bitrate: 2.5e7, // 25 Mbps
                     latencyMode: "realtime",
                 };
-                const { supported, config: supportedConfig } =
-                    await VideoEncoder.isConfigSupported(config);
+                const { supported, config: supportedConfig } = await VideoEncoder.isConfigSupported(config);
                 if (supported && supportedConfig) {
                     this.encoder.configure(config);
                 } else {
@@ -121,8 +117,7 @@ export class FrameRecorder {
             if (canvas) {
                 // Add a keyframe every second: https://en.wikipedia.org/wiki/Key_frame
                 const keyFrame = this.frameIndex % this.frameRate === 0;
-                const timestampMicroseconds =
-                    (this.frameIndex / this.frameRate) * 1_000_000;
+                const timestampMicroseconds = (this.frameIndex / this.frameRate) * 1_000_000;
                 const durationMicroseconds = 1_000_000 / this.frameRate;
                 const newFrame = new VideoFrame(canvas, {
                     timestamp: timestampMicroseconds,
diff --git a/src/simularium/FrontEndError.ts b/src/simularium/FrontEndError.ts
index 27fb6515..ed520ab8 100644
--- a/src/simularium/FrontEndError.ts
+++ b/src/simularium/FrontEndError.ts
@@ -7,12 +7,7 @@ export enum ErrorLevel {
 export class FrontEndError extends Error {
     public htmlData: string;
     public level: ErrorLevel;
-    constructor(
-        message: string,
-        level = ErrorLevel.ERROR,
-        htmlData = "",
-        ...params: string[]
-    ) {
+    constructor(message: string, level = ErrorLevel.ERROR, htmlData = "", ...params: string[]) {
         // Pass remaining arguments (including vendor specific ones) to parent constructor
         super(...params);
         this.name = "FrontEndError";
diff --git a/src/simularium/ISimulator.ts b/src/simularium/ISimulator.ts
index 2f510198..b6cfecde 100644
--- a/src/simularium/ISimulator.ts
+++ b/src/simularium/ISimulator.ts
@@ -6,14 +6,10 @@ import { VisDataMessage, TrajectoryFileInfo } from "./types";
 // and are some of them completely specific to websockets only?
 export interface ISimulator {
     // a callback to notify when TrajctoryFileInfo is ready
-    setTrajectoryFileInfoHandler(
-        handler: (msg: TrajectoryFileInfo) => void
-    ): void;
+    setTrajectoryFileInfoHandler(handler: (msg: TrajectoryFileInfo) => void): void;
 
     // a callback to notify when VisDataMessage is ready (the agent data)
-    setTrajectoryDataHandler(
-        handler: (msg: VisDataMessage | ArrayBuffer) => void
-    ): void;
+    setTrajectoryDataHandler(handler: (msg: VisDataMessage | ArrayBuffer) => void): void;
 
     /**
      * Connect
diff --git a/src/simularium/JsonFileReader.ts b/src/simularium/JsonFileReader.ts
index 484078e6..77366280 100644
--- a/src/simularium/JsonFileReader.ts
+++ b/src/simularium/JsonFileReader.ts
@@ -1,10 +1,5 @@
 import type { ISimulariumFile } from "./ISimulariumFile";
-import type {
-    Plot,
-    SimulariumFileFormat,
-    TrajectoryFileInfo,
-    VisDataFrame,
-} from "./types";
+import type { Plot, SimulariumFileFormat, TrajectoryFileInfo, VisDataFrame } from "./types";
 import { FrontEndError } from "./FrontEndError";
 import { compareTimes } from "../util";
 
@@ -15,14 +10,9 @@ export default class JsonFileReader implements ISimulariumFile {
 
         const spatialData = this.simulariumFile.spatialData;
         if (!spatialData) {
-            throw new FrontEndError(
-                "Simularium files need 'spatialData' array"
-            );
+            throw new FrontEndError("Simularium files need 'spatialData' array");
         }
-        spatialData.bundleData.sort(
-            (a: VisDataFrame, b: VisDataFrame): number =>
-                a.frameNumber - b.frameNumber
-        );
+        spatialData.bundleData.sort((a: VisDataFrame, b: VisDataFrame): number => a.frameNumber - b.frameNumber);
     }
 
     getTrajectoryFileInfo(): TrajectoryFileInfo {
diff --git a/src/simularium/LocalFileSimulator.ts b/src/simularium/LocalFileSimulator.ts
index 49115c45..1c62142f 100644
--- a/src/simularium/LocalFileSimulator.ts
+++ b/src/simularium/LocalFileSimulator.ts
@@ -31,14 +31,10 @@ export class LocalFileSimulator implements ISimulator {
         console.log("NEW LOCALFILECONNECTION");
     }
 
-    public setTrajectoryFileInfoHandler(
-        handler: (msg: TrajectoryFileInfoV2) => void
-    ): void {
+    public setTrajectoryFileInfoHandler(handler: (msg: TrajectoryFileInfoV2) => void): void {
         this.onTrajectoryFileInfoArrive = handler;
     }
-    public setTrajectoryDataHandler(
-        handler: (msg: VisDataMessage | ArrayBuffer) => void
-    ): void {
+    public setTrajectoryDataHandler(handler: (msg: VisDataMessage | ArrayBuffer) => void): void {
         this.onTrajectoryDataArrive = handler;
     }
 
@@ -86,10 +82,7 @@ export class LocalFileSimulator implements ISimulator {
      *  Trajectory File: No simulation run, stream a result file piecemeal
      *
      */
-    public startRemoteSimPreRun(
-        _timeStep: number,
-        _numTimeSteps: number
-    ): void {
+    public startRemoteSimPreRun(_timeStep: number, _numTimeSteps: number): void {
         // not implemented
     }
 
@@ -120,9 +113,7 @@ export class LocalFileSimulator implements ISimulator {
                 this.pauseRemoteSim();
                 return;
             }
-            this.onTrajectoryDataArrive(
-                this.getFrame(this.currentPlaybackFrameIndex)
-            );
+            this.onTrajectoryDataArrive(this.getFrame(this.currentPlaybackFrameIndex));
             this.currentPlaybackFrameIndex++;
         }, 1);
     }
@@ -148,9 +139,7 @@ export class LocalFileSimulator implements ISimulator {
     }
 
     public requestTrajectoryFileInfo(_fileName: string): void {
-        this.onTrajectoryFileInfoArrive(
-            this.simulariumFile.getTrajectoryFileInfo()
-        );
+        this.onTrajectoryFileInfoArrive(this.simulariumFile.getTrajectoryFileInfo());
     }
 
     public sendUpdate(_obj: Record<string, unknown>): void {
diff --git a/src/simularium/RemoteMetricsCalculator.ts b/src/simularium/RemoteMetricsCalculator.ts
index dc8d886a..2ba9e7e9 100644
--- a/src/simularium/RemoteMetricsCalculator.ts
+++ b/src/simularium/RemoteMetricsCalculator.ts
@@ -9,10 +9,7 @@ export class RemoteMetricsCalculator {
     public handleError: (error: FrontEndError) => void | (() => void);
     private webSocketClient: WebsocketClient;
 
-    public constructor(
-        webSocketClient: WebsocketClient,
-        errorHandler?: (error: FrontEndError) => void
-    ) {
+    public constructor(webSocketClient: WebsocketClient, errorHandler?: (error: FrontEndError) => void) {
         this.handleError =
             errorHandler ||
             (() => {
@@ -39,11 +36,7 @@ export class RemoteMetricsCalculator {
         );
     }
 
-    public getPlotData(
-        data: Record<string, unknown>,
-        plots: Array<PlotConfig>,
-        fileName?: string
-    ): void {
+    public getPlotData(data: Record<string, unknown>, plots: Array<PlotConfig>, fileName?: string): void {
         this.webSocketClient.sendWebSocketRequest(
             {
                 msgType: NetMessageEnum.ID_PLOT_DATA_REQUEST,
@@ -71,9 +64,6 @@ export class RemoteMetricsCalculator {
             this.onAvailableMetricsArrive
         );
 
-        this.webSocketClient.addJsonMessageHandler(
-            NetMessageEnum.ID_PLOT_DATA_RESPONSE,
-            this.onPlotDataArrive
-        );
+        this.webSocketClient.addJsonMessageHandler(NetMessageEnum.ID_PLOT_DATA_RESPONSE, this.onPlotDataArrive);
     }
 }
diff --git a/src/simularium/RemoteSimulator.ts b/src/simularium/RemoteSimulator.ts
index ad0bef24..693e29b2 100644
--- a/src/simularium/RemoteSimulator.ts
+++ b/src/simularium/RemoteSimulator.ts
@@ -2,11 +2,7 @@ import jsLogger from "js-logger";
 import { v4 as uuidv4 } from "uuid";
 import { ILogger } from "js-logger";
 import { FrontEndError, ErrorLevel } from "./FrontEndError";
-import {
-    WebsocketClient,
-    NetMessageEnum,
-    MessageEventLike,
-} from "./WebsocketClient";
+import { WebsocketClient, NetMessageEnum, MessageEventLike } from "./WebsocketClient";
 import type { NetMessage, ErrorMessage } from "./WebsocketClient";
 import { ISimulator } from "./ISimulator";
 import { TrajectoryFileInfoV2, VisDataMessage } from "./types";
@@ -23,10 +19,7 @@ export class RemoteSimulator implements ISimulator {
     protected lastRequestedFile: string;
     public handleError: (error: FrontEndError) => void | (() => void);
 
-    public constructor(
-        webSocketClient: WebsocketClient,
-        errorHandler?: (error: FrontEndError) => void
-    ) {
+    public constructor(webSocketClient: WebsocketClient, errorHandler?: (error: FrontEndError) => void) {
         this.webSocketClient = webSocketClient;
         this.lastRequestedFile = "";
         this.handleError =
@@ -51,14 +44,10 @@ export class RemoteSimulator implements ISimulator {
         };
     }
 
-    public setTrajectoryFileInfoHandler(
-        handler: (msg: TrajectoryFileInfoV2) => void
-    ): void {
+    public setTrajectoryFileInfoHandler(handler: (msg: TrajectoryFileInfoV2) => void): void {
         this.onTrajectoryFileInfoArrive = handler;
     }
-    public setTrajectoryDataHandler(
-        handler: (msg: VisDataMessage) => void
-    ): void {
+    public setTrajectoryDataHandler(handler: (msg: VisDataMessage) => void): void {
         this.onTrajectoryDataArrive = handler;
     }
 
@@ -83,21 +72,13 @@ export class RemoteSimulator implements ISimulator {
         const floatView = new Float32Array(event.data);
         const nameLength = floatView[1];
         const byteView = new Uint8Array(event.data);
-        const fileBytes = byteView.subarray(
-            OFFSET_TO_NAME_LENGTH,
-            OFFSET_TO_NAME_LENGTH + nameLength
-        );
+        const fileBytes = byteView.subarray(OFFSET_TO_NAME_LENGTH, OFFSET_TO_NAME_LENGTH + nameLength);
         const fileName = new TextDecoder("utf-8").decode(fileBytes);
 
         if (fileName == this.lastRequestedFile) {
             this.onTrajectoryDataArrive(event.data);
         } else {
-            this.logger.error(
-                "File arrived ",
-                fileName,
-                " is not file ",
-                this.lastRequestedFile
-            );
+            this.logger.error("File arrived ", fileName, " is not file ", this.lastRequestedFile);
         }
     }
 
@@ -133,63 +114,47 @@ export class RemoteSimulator implements ISimulator {
     }
 
     public onErrorMsg(msg: ErrorMessage): void {
-        this.logger.error(
-            "Error message of type ",
-            msg.errorCode,
-            " arrived: ",
-            msg.errorMsg
-        );
+        this.logger.error("Error message of type ", msg.errorCode, " arrived: ", msg.errorMsg);
         const error = new FrontEndError(msg.errorMsg, ErrorLevel.WARNING);
         this.handleError(error);
         // TODO: specific handling based on error code
     }
 
     private registerBinaryMessageHandlers(): void {
-        this.webSocketClient.addBinaryMessageHandler(
-            NetMessageEnum.ID_VIS_DATA_ARRIVE,
-            (msg) => this.onBinaryIdVisDataArrive(msg)
+        this.webSocketClient.addBinaryMessageHandler(NetMessageEnum.ID_VIS_DATA_ARRIVE, (msg) =>
+            this.onBinaryIdVisDataArrive(msg)
         );
     }
 
     private registerJsonMessageHandlers(): void {
-        this.webSocketClient.addJsonMessageHandler(
-            NetMessageEnum.ID_TRAJECTORY_FILE_INFO,
-            (msg) => this.onTrajectoryFileInfoArrive(msg)
+        this.webSocketClient.addJsonMessageHandler(NetMessageEnum.ID_TRAJECTORY_FILE_INFO, (msg) =>
+            this.onTrajectoryFileInfoArrive(msg)
         );
 
-        this.webSocketClient.addJsonMessageHandler(
-            NetMessageEnum.ID_HEARTBEAT_PING,
-            (msg) => this.onHeartbeatPing(msg)
+        this.webSocketClient.addJsonMessageHandler(NetMessageEnum.ID_HEARTBEAT_PING, (msg) =>
+            this.onHeartbeatPing(msg)
         );
 
-        this.webSocketClient.addJsonMessageHandler(
-            NetMessageEnum.ID_VIS_DATA_ARRIVE,
-            (msg) => this.onJsonIdVisDataArrive(msg)
+        this.webSocketClient.addJsonMessageHandler(NetMessageEnum.ID_VIS_DATA_ARRIVE, (msg) =>
+            this.onJsonIdVisDataArrive(msg)
         );
 
-        this.webSocketClient.addJsonMessageHandler(
-            NetMessageEnum.ID_UPDATE_TIME_STEP,
-            (_msg) => this.updateTimestep()
-        );
+        this.webSocketClient.addJsonMessageHandler(NetMessageEnum.ID_UPDATE_TIME_STEP, (_msg) => this.updateTimestep());
 
-        this.webSocketClient.addJsonMessageHandler(
-            NetMessageEnum.ID_UPDATE_RATE_PARAM,
-            (_msg) => this.updateRateParam()
+        this.webSocketClient.addJsonMessageHandler(NetMessageEnum.ID_UPDATE_RATE_PARAM, (_msg) =>
+            this.updateRateParam()
         );
 
-        this.webSocketClient.addJsonMessageHandler(
-            NetMessageEnum.ID_MODEL_DEFINITION,
-            (_msg) => this.onModelDefinitionArrive()
+        this.webSocketClient.addJsonMessageHandler(NetMessageEnum.ID_MODEL_DEFINITION, (_msg) =>
+            this.onModelDefinitionArrive()
         );
 
-        this.webSocketClient.addJsonMessageHandler(
-            NetMessageEnum.ID_SERVER_HEALTHY_RESPONSE,
-            (_msg) => this.healthCheckHandler()
+        this.webSocketClient.addJsonMessageHandler(NetMessageEnum.ID_SERVER_HEALTHY_RESPONSE, (_msg) =>
+            this.healthCheckHandler()
         );
 
-        this.webSocketClient.addJsonMessageHandler(
-            NetMessageEnum.ID_ERROR_MSG,
-            (msg) => this.onErrorMsg(msg as ErrorMessage)
+        this.webSocketClient.addJsonMessageHandler(NetMessageEnum.ID_ERROR_MSG, (msg) =>
+            this.onErrorMsg(msg as ErrorMessage)
         );
     }
 
@@ -231,10 +196,7 @@ export class RemoteSimulator implements ISimulator {
             paramName: paramName,
             paramValue: paramValue,
         };
-        this.webSocketClient.sendWebSocketRequest(
-            jsonData,
-            "Rate Parameter Update"
-        );
+        this.webSocketClient.sendWebSocketRequest(jsonData, "Rate Parameter Update");
     }
 
     public sendModelDefinition(model: string): void {
@@ -242,19 +204,13 @@ export class RemoteSimulator implements ISimulator {
             model: model,
             msgType: NetMessageEnum.ID_MODEL_DEFINITION,
         };
-        this.webSocketClient.sendWebSocketRequest(
-            dataToSend,
-            "Model Definition"
-        );
+        this.webSocketClient.sendWebSocketRequest(dataToSend, "Model Definition");
     }
 
     /**
      * WebSocket Simulation Control
      */
-    public startRemoteSimPreRun(
-        _timeStep: number,
-        _numTimeSteps: number
-    ): void {
+    public startRemoteSimPreRun(_timeStep: number, _numTimeSteps: number): void {
         // not implemented
     }
 
@@ -273,10 +229,7 @@ export class RemoteSimulator implements ISimulator {
         // Note that it is possible for the first vis data to arrive before the TrajectoryFileInfo...
         return this.connectToRemoteServer()
             .then(() => {
-                this.webSocketClient.sendWebSocketRequest(
-                    jsonData,
-                    "Start Trajectory File Playback"
-                );
+                this.webSocketClient.sendWebSocketRequest(jsonData, "Start Trajectory File Playback");
             })
             .catch((error) => {
                 throw new FrontEndError(error.message, ErrorLevel.ERROR);
@@ -381,10 +334,7 @@ export class RemoteSimulator implements ISimulator {
     ): void {
         // Check for provided file name, and if none provided
         // generate random file name for converted file to be stored on the server
-        const fileName =
-            providedFileName !== undefined
-                ? providedFileName
-                : uuidv4() + ".simularium";
+        const fileName = providedFileName !== undefined ? providedFileName : uuidv4() + ".simularium";
         this.lastRequestedFile = fileName;
         this.webSocketClient.sendWebSocketRequest(
             {
@@ -408,9 +358,7 @@ export class RemoteSimulator implements ISimulator {
                 );
             })
             .catch((e) => {
-                this.handleError(
-                    new FrontEndError(e.message, ErrorLevel.WARNING)
-                );
+                this.handleError(new FrontEndError(e.message, ErrorLevel.WARNING));
             });
     }
 
diff --git a/src/simularium/SelectionInterface.ts b/src/simularium/SelectionInterface.ts
index 71a25960..c08853f2 100644
--- a/src/simularium/SelectionInterface.ts
+++ b/src/simularium/SelectionInterface.ts
@@ -63,9 +63,7 @@ class SelectionInterface {
     public parse(idNameMapping: EncodedTypeMapping): void {
         this.clear();
         if (!idNameMapping) {
-            throw new Error(
-                "Trajectory is missing agent type mapping information."
-            );
+            throw new Error("Trajectory is missing agent type mapping information.");
         }
         Object.keys(idNameMapping).forEach((id) => {
             if (isNaN(parseInt(id))) {
@@ -101,9 +99,7 @@ class SelectionInterface {
 
         if (!name) {
             // error can be caught by onError prop to viewer
-            throw new Error(
-                `invalid name. Agent id: ${id}, name: ${encodedName}`
-            );
+            throw new Error(`invalid name. Agent id: ${id}, name: ${encodedName}`);
         }
 
         const uniqueTags = [...new Set(tags)];
@@ -147,11 +143,7 @@ class SelectionInterface {
             return [];
         }
         entryList.forEach((entry) => {
-            if (
-                !tags ||
-                tags.length === 0 ||
-                tags.some((t) => entry.tags.includes(t))
-            ) {
+            if (!tags || tags.length === 0 || tags.some((t) => entry.tags.includes(t))) {
                 if (entry.id >= 0) {
                     indices.push(entry.id);
                 }
@@ -184,10 +176,7 @@ class SelectionInterface {
         if (!entryList) {
             return [];
         }
-        const state = find(
-            entryList,
-            (entry: DecodedTypeEntry) => entry.id === id
-        );
+        const state = find(entryList, (entry: DecodedTypeEntry) => entry.id === id);
         if (state) {
             return state.tags;
         }
@@ -228,13 +217,8 @@ class SelectionInterface {
 
     public getParentColor(name: string): string {
         // wrapping in filter removes undefined values
-        const listOfUniqChildrenColors = filter(
-            uniq(map(this.entries[name], "color"))
-        );
-        const color =
-            listOfUniqChildrenColors.length === 1
-                ? listOfUniqChildrenColors[0]
-                : "";
+        const listOfUniqChildrenColors = filter(uniq(map(this.entries[name], "color")));
+        const color = listOfUniqChildrenColors.length === 1 ? listOfUniqChildrenColors[0] : "";
         return color;
     }
 
@@ -242,8 +226,7 @@ class SelectionInterface {
         return Object.keys(this.entries).map((name) => {
             const displayStates: DisplayStateEntry[] = [];
             const encounteredTags: string[] = [];
-            const hasMultipleStates =
-                Object.keys(this.entries[name]).length > 1;
+            const hasMultipleStates = Object.keys(this.entries[name]).length > 1;
             this.entries[name].forEach((entry: DecodedTypeEntry) => {
                 // add unmodified state if there are multiple states, and one of them
                 // has no state tags
@@ -279,11 +262,7 @@ class SelectionInterface {
         });
     }
 
-    private updateUiDataColor(
-        agentName: string,
-        idsToUpdate: number[],
-        color: number | string
-    ): void {
+    private updateUiDataColor(agentName: string, idsToUpdate: number[], color: number | string): void {
         const newColor = convertColorNumberToString(color);
         const entry = this.entries[agentName];
         // if no display state update parent color
@@ -318,11 +297,7 @@ class SelectionInterface {
                     agentIds: ids,
                     color: colors[defaultColorIndex],
                 });
-                this.updateUiDataColor(
-                    group.name,
-                    ids,
-                    colors[defaultColorIndex]
-                );
+                this.updateUiDataColor(group.name, ids, colors[defaultColorIndex]);
             } else {
                 // otherwise, we need to update any user defined colors
                 newColors.forEach((color, index) => {
@@ -341,11 +316,7 @@ class SelectionInterface {
                         }
                     } else {
                         // need update the display data with the default color being used
-                        this.updateUiDataColor(
-                            group.name,
-                            [ids[index]],
-                            colors[groupColorIndex]
-                        );
+                        this.updateUiDataColor(group.name, [ids[index]], colors[groupColorIndex]);
                     }
                     // if the user used all the same colors for all states of this agent,
                     // use that for the group as well
@@ -362,18 +333,13 @@ class SelectionInterface {
                 });
             }
             if (groupColorIndex > -1) {
-                group.color = convertColorNumberToString(
-                    colors[groupColorIndex]
-                );
+                group.color = convertColorNumberToString(colors[groupColorIndex]);
             } else {
                 group.color = "";
             }
             // if we used any of the default color array
             // need to go to the next default color.
-            if (
-                filter(newColors).length !== ids.length ||
-                groupColorIndex === defaultColorIndex
-            ) {
+            if (filter(newColors).length !== ids.length || groupColorIndex === defaultColorIndex) {
                 defaultColorIndex++;
             }
         });
diff --git a/src/simularium/VisData.ts b/src/simularium/VisData.ts
index 38d689b9..7a77ebb1 100644
--- a/src/simularium/VisData.ts
+++ b/src/simularium/VisData.ts
@@ -30,8 +30,7 @@ class VisData {
             size: 0,
         };
         const numMetadataFields = Object.keys(frameData).length - 1; // exclude "data" field
-        frameData.size =
-            data.byteLength + numMetadataFields * BYTE_SIZE_64_BIT_NUM;
+        frameData.size = data.byteLength + numMetadataFields * BYTE_SIZE_64_BIT_NUM;
 
         return frameData;
     }
@@ -61,9 +60,7 @@ class VisData {
                 return firstFrame;
             }
         } else {
-            const frame = this.frameCache.getFrameAtFrameNumber(
-                this.currentFrameNumber
-            );
+            const frame = this.frameCache.getFrameAtFrameNumber(this.currentFrameNumber);
             if (frame !== undefined) {
                 return frame;
             }
@@ -139,10 +136,7 @@ class VisData {
             }
         }
         const parsedMsg: CachedFrame = parseVisDataMessage(visDataMsg);
-        if (
-            this.frameCache.cacheSizeLimited &&
-            parsedMsg.size > this.frameCache.maxSize
-        ) {
+        if (this.frameCache.cacheSizeLimited && parsedMsg.size > this.frameCache.maxSize) {
             this.frameExceedsCacheSizeError(parsedMsg.size);
             return;
         }
@@ -178,10 +172,7 @@ class VisData {
     }
 
     private addFrameToCache(frame: CachedFrame): void {
-        if (
-            this.frameCache.cacheSizeLimited &&
-            frame.size > this.frameCache.maxSize
-        ) {
+        if (this.frameCache.cacheSizeLimited && frame.size > this.frameCache.maxSize) {
             this.frameExceedsCacheSizeError(frame.size);
             return;
         }
diff --git a/src/simularium/VisDataCache.ts b/src/simularium/VisDataCache.ts
index bcb6107b..0702719c 100644
--- a/src/simularium/VisDataCache.ts
+++ b/src/simularium/VisDataCache.ts
@@ -33,10 +33,7 @@ class VisDataCache {
         }
     }
 
-    public changeSettings(options: {
-        maxSize?: number;
-        cacheEnabled?: boolean;
-    }): void {
+    public changeSettings(options: { maxSize?: number; cacheEnabled?: boolean }): void {
         const { maxSize, cacheEnabled } = options;
         if (cacheEnabled !== undefined) {
             this._cacheEnabled = cacheEnabled;
@@ -67,10 +64,7 @@ class VisDataCache {
      * returns the node if found, otherwise returns null,
      * starts at head if firstNode is not provided.
      */
-    private findInLinkedList(
-        condition: (data: CacheNode) => boolean,
-        firstNode?: CacheNode
-    ): CacheNode | undefined {
+    private findInLinkedList(condition: (data: CacheNode) => boolean, firstNode?: CacheNode): CacheNode | undefined {
         let currentNode = firstNode || this.head;
         while (currentNode) {
             if (condition(currentNode)) {
@@ -95,15 +89,10 @@ class VisDataCache {
     }
 
     public containsFrameAtFrameNumber(frameNumber: number): boolean {
-        if (
-            frameNumber < this.getFirstFrameNumber() ||
-            frameNumber > this.getLastFrameNumber()
-        ) {
+        if (frameNumber < this.getFirstFrameNumber() || frameNumber > this.getLastFrameNumber()) {
             return false;
         }
-        return !!this.findInLinkedList(
-            (node) => node.data.frameNumber === frameNumber
-        );
+        return !!this.findInLinkedList((node) => node.data.frameNumber === frameNumber);
     }
 
     public getFirstFrame(): CachedFrame | undefined {
@@ -130,9 +119,7 @@ class VisDataCache {
         return this.tail?.data.time || -1;
     }
 
-    private getFrameAtCondition(
-        condition: (data: CacheNode) => boolean
-    ): CachedFrame | undefined {
+    private getFrameAtCondition(condition: (data: CacheNode) => boolean): CachedFrame | undefined {
         if (!this.head) {
             return;
         }
@@ -143,16 +130,12 @@ class VisDataCache {
     }
 
     public getFrameAtTime(time: number): CachedFrame | undefined {
-        const frame = this.getFrameAtCondition(
-            (node) => compareTimes(node.data.time, time, 0) === 0
-        );
+        const frame = this.getFrameAtCondition((node) => compareTimes(node.data.time, time, 0) === 0);
         return frame ? frame : undefined;
     }
 
     public getFrameAtFrameNumber(frameNumber: number): CachedFrame | undefined {
-        const frame = this.getFrameAtCondition(
-            (node) => node.data["frameNumber"] === frameNumber
-        );
+        const frame = this.getFrameAtCondition((node) => node.data["frameNumber"] === frameNumber);
         return frame ? frame : undefined;
     }
 
@@ -228,11 +211,7 @@ class VisDataCache {
     }
 
     private trimCache(incomingDataSize?: number): void {
-        while (
-            this.hasFrames() &&
-            this.size + (incomingDataSize || 0) > this._maxSize &&
-            this.head !== null
-        ) {
+        while (this.hasFrames() && this.size + (incomingDataSize || 0) > this._maxSize && this.head !== null) {
             this.removeNode(this.head);
         }
     }
diff --git a/src/simularium/VisDataParse.ts b/src/simularium/VisDataParse.ts
index f06d2425..7a484b3d 100644
--- a/src/simularium/VisDataParse.ts
+++ b/src/simularium/VisDataParse.ts
@@ -48,10 +48,7 @@ function parseVisDataMessage(visDataMsg: VisDataMessage): CachedFrame {
         agentCount++;
 
         // Copy agent data
-        const agentData = frame.data.slice(
-            readIndex,
-            readIndex + FRAME_DATA_SIZE
-        );
+        const agentData = frame.data.slice(readIndex, readIndex + FRAME_DATA_SIZE);
         view.set(agentData, writeIndex);
         readIndex += FRAME_DATA_SIZE;
         writeIndex += FRAME_DATA_SIZE;
@@ -59,9 +56,9 @@ function parseVisDataMessage(visDataMsg: VisDataMessage): CachedFrame {
         // Validate data integrity
         if (--readIndex + nSubPoints > frame.data.length) {
             throw new FrontEndError(
-                `Your data is malformed, there are too few entries. Found ${
-                    frame.data.length
-                }, expected ${readIndex + nSubPoints}.`,
+                `Your data is malformed, there are too few entries. Found ${frame.data.length}, expected ${
+                    readIndex + nSubPoints
+                }.`,
                 ErrorLevel.ERROR
             );
         }
@@ -102,8 +99,7 @@ function calculateBufferSize(data: number[]): number {
 
     while (index < data.length) {
         size += FRAME_DATA_SIZE * 4; // Agent header size in bytes
-        const nSubPoints =
-            data[index + AGENT_OBJECT_KEYS.indexOf("nSubPoints")];
+        const nSubPoints = data[index + AGENT_OBJECT_KEYS.indexOf("nSubPoints")];
         size += nSubPoints * 4; // Subpoints size in bytes
         index += FRAME_DATA_SIZE + nSubPoints;
     }
diff --git a/src/simularium/WebsocketClient.ts b/src/simularium/WebsocketClient.ts
index 7e465bd2..72bf64f8 100644
--- a/src/simularium/WebsocketClient.ts
+++ b/src/simularium/WebsocketClient.ts
@@ -89,26 +89,14 @@ export class WebsocketClient {
     public connectionTimeWaited: number;
     public connectionRetries: number;
     protected jsonMessageHandlers: Map<NetMessageEnum, (NetMessage) => void>;
-    protected binaryMessageHandlers: Map<
-        NetMessageEnum,
-        (MessageEventLike) => void
-    >;
+    protected binaryMessageHandlers: Map<NetMessageEnum, (MessageEventLike) => void>;
     protected logger: ILogger;
     public handleError: (error: FrontEndError) => void | (() => void);
 
-    public constructor(
-        opts?: NetConnectionParams,
-        errorHandler?: (error: FrontEndError) => void
-    ) {
+    public constructor(opts?: NetConnectionParams, errorHandler?: (error: FrontEndError) => void) {
         this.webSocket = null;
-        this.jsonMessageHandlers = new Map<
-            NetMessageEnum,
-            (NetMessage) => void
-        >();
-        this.binaryMessageHandlers = new Map<
-            NetMessageEnum,
-            (NetMessage) => void
-        >();
+        this.jsonMessageHandlers = new Map<NetMessageEnum, (NetMessage) => void>();
+        this.binaryMessageHandlers = new Map<NetMessageEnum, (NetMessage) => void>();
         this.serverIp = opts && opts.serverIp ? opts.serverIp : "localhost";
         this.serverPort = opts && opts.serverPort ? opts.serverPort : 9002;
         this.connectionTimeWaited = 0;
@@ -130,40 +118,25 @@ export class WebsocketClient {
      * WebSocket State
      */
     private socketIsConnecting(): boolean {
-        return (
-            this.webSocket !== null &&
-            this.webSocket.readyState === this.webSocket.CONNECTING
-        );
+        return this.webSocket !== null && this.webSocket.readyState === this.webSocket.CONNECTING;
     }
 
     public socketIsValid(): boolean {
-        return !(
-            this.webSocket === null ||
-            this.webSocket.readyState === this.webSocket.CLOSED
-        );
+        return !(this.webSocket === null || this.webSocket.readyState === this.webSocket.CLOSED);
     }
 
     private socketIsConnected(): boolean {
-        return (
-            this.webSocket !== null &&
-            this.webSocket.readyState === this.webSocket.OPEN
-        );
+        return this.webSocket !== null && this.webSocket.readyState === this.webSocket.OPEN;
     }
 
     /**
      *   Websocket Message Handling
      * */
-    public addBinaryMessageHandler(
-        messageType: NetMessageEnum,
-        handler: (msg: MessageEventLike) => void
-    ): void {
+    public addBinaryMessageHandler(messageType: NetMessageEnum, handler: (msg: MessageEventLike) => void): void {
         this.binaryMessageHandlers[messageType.valueOf()] = handler;
     }
 
-    public addJsonMessageHandler(
-        messageType: NetMessageEnum,
-        handler: (msg: NetMessage) => void
-    ): void {
+    public addJsonMessageHandler(messageType: NetMessageEnum, handler: (msg: NetMessage) => void): void {
         this.jsonMessageHandlers[messageType] = handler;
     }
 
@@ -180,10 +153,7 @@ export class WebsocketClient {
             if (binaryMsgType in this.binaryMessageHandlers) {
                 this.binaryMessageHandlers[binaryMsgType](event);
             } else {
-                this.logger.error(
-                    "Unexpected binary message arrived of type ",
-                    binaryMsgType
-                );
+                this.logger.error("Unexpected binary message arrived of type ", binaryMsgType);
             }
             return;
         }
@@ -196,21 +166,14 @@ export class WebsocketClient {
         if (jsonMsgType > numMsgTypes || jsonMsgType < 1) {
             // this suggests either the back-end is out of sync, or a connection to an unknown back-end
             //  either would be very bad
-            this.logger.error(
-                "Unrecognized web message of type ",
-                msg.msgType,
-                " arrived"
-            );
+            this.logger.error("Unrecognized web message of type ", msg.msgType, " arrived");
             return;
         }
 
         if (jsonMsgType in this.jsonMessageHandlers) {
             this.jsonMessageHandlers[jsonMsgType](msg);
         } else {
-            this.logger.error(
-                "Unexpected json message arrived of type ",
-                jsonMsgType
-            );
+            this.logger.error("Unexpected json message arrived of type ", jsonMsgType);
         }
         this.logger.debug("Web request recieved", msg.msgType);
     }
@@ -265,11 +228,7 @@ export class WebsocketClient {
         );
     }
 
-    public async checkConnection(
-        address: string,
-        timeout = 1000,
-        maxRetries = 1
-    ): Promise<boolean> {
+    public async checkConnection(address: string, timeout = 1000, maxRetries = 1): Promise<boolean> {
         // Check if the WebSocket becomes connected within an allotted amount
         // of time and number of retries.
 
@@ -322,19 +281,14 @@ export class WebsocketClient {
         this.logger.debug("Web Socket Request Sent: ", whatRequest, jsonData);
     }
 
-    public sendWebSocketRequest(
-        jsonData: Record<string, unknown>,
-        requestDescription: string
-    ): void {
+    public sendWebSocketRequest(jsonData: Record<string, unknown>, requestDescription: string): void {
         if (this.socketIsConnected()) {
             if (this.webSocket !== null) {
                 this.webSocket.send(JSON.stringify(jsonData));
             }
             this.logWebSocketRequest(requestDescription, jsonData);
         } else {
-            console.error(
-                "Request to server cannot be made with a closed Websocket connection."
-            );
+            console.error("Request to server cannot be made with a closed Websocket connection.");
             this.handleError(
                 new FrontEndError(
                     "Connection to server is closed; please try reloading. If the problem persists, the server may be too busy. Please try again at another time.",
diff --git a/src/simularium/index.ts b/src/simularium/index.ts
index 66e7c3c1..39a1f07e 100644
--- a/src/simularium/index.ts
+++ b/src/simularium/index.ts
@@ -11,11 +11,7 @@ export type {
     AgentData,
 } from "./types";
 
-export type {
-    SelectionStateInfo,
-    UIDisplayData,
-    SelectionEntry,
-} from "./SelectionInterface";
+export type { SelectionStateInfo, UIDisplayData, SelectionEntry } from "./SelectionInterface";
 export { ErrorLevel, FrontEndError } from "./FrontEndError";
 export { NetMessageEnum } from "./WebsocketClient";
 export { RemoteSimulator } from "./RemoteSimulator";
diff --git a/src/simularium/orchestrator/index.ts b/src/simularium/orchestrator/index.ts
index 5a5f87f6..3c1841c8 100644
--- a/src/simularium/orchestrator/index.ts
+++ b/src/simularium/orchestrator/index.ts
@@ -17,9 +17,7 @@ export default class Orchestrator {
         this.serviceAddr = params.serviceAddr || "https://localhost:5000";
     }
 
-    public getNodes(
-        params: string
-    ): Promise<NodeConfig[]> | Promise<undefined> {
+    public getNodes(params: string): Promise<NodeConfig[]> | Promise<undefined> {
         const nodeFetch = fetch(this.serviceAddr + "/get?" + params);
 
         return nodeFetch
@@ -42,33 +40,17 @@ export default class Orchestrator {
         return this.getNodes(params);
     }
 
-    public getSimNode(
-        simId: string
-    ): Promise<NodeConfig[]> | Promise<undefined> {
+    public getSimNode(simId: string): Promise<NodeConfig[]> | Promise<undefined> {
         const params: string = "simulation=" + simId;
         return this.getNodes(params);
     }
 
     public reserveNode(config: NodeConfig, simulation: string): void {
-        fetch(
-            this.serviceAddr +
-                "/assign" +
-                "?command=reserve" +
-                "&simulation=" +
-                simulation +
-                "&name=" +
-                config.name
-        );
+        fetch(this.serviceAddr + "/assign" + "?command=reserve" + "&simulation=" + simulation + "&name=" + config.name);
     }
 
     public freeNode(config: NodeConfig): void {
-        fetch(
-            this.serviceAddr +
-                "/assign?" +
-                "command=free" +
-                "&name=" +
-                config.name
-        );
+        fetch(this.serviceAddr + "/assign?" + "command=free" + "&name=" + config.name);
     }
 }
 
diff --git a/src/simularium/types.ts b/src/simularium/types.ts
index 4d3191bf..7ada70d3 100644
--- a/src/simularium/types.ts
+++ b/src/simularium/types.ts
@@ -30,8 +30,7 @@ export interface PerspectiveCameraSpec {
     fovDegrees: number;
 }
 
-export type CameraSpec = PerspectiveCameraSpec &
-    ({ orthographic: false } | { orthographic: true; zoom: number });
+export type CameraSpec = PerspectiveCameraSpec & ({ orthographic: false } | { orthographic: true; zoom: number });
 
 interface ScatterTrace {
     x: number[];
diff --git a/src/simularium/versionHandlers.ts b/src/simularium/versionHandlers.ts
index de03e99e..88a4f720 100644
--- a/src/simularium/versionHandlers.ts
+++ b/src/simularium/versionHandlers.ts
@@ -3,12 +3,7 @@ import * as si from "si-prefix";
 
 import { DEFAULT_CAMERA_SPEC_PERSPECTIVE } from "../constants";
 import { FrontEndError, ErrorLevel } from "./FrontEndError";
-import {
-    AgentDisplayDataWithGeometry,
-    TrajectoryFileInfo,
-    TrajectoryFileInfoAny,
-    TrajectoryFileInfoV1,
-} from "./types";
+import { AgentDisplayDataWithGeometry, TrajectoryFileInfo, TrajectoryFileInfoAny, TrajectoryFileInfoV1 } from "./types";
 import { GeometryDisplayType } from "../visGeometry/types";
 
 // the data may come in missing any of these values
@@ -31,10 +26,7 @@ Currently supported versions: 1, 2
 */
 const LATEST_VERSION = 3;
 const VERSION_NUM_ERROR = "Invalid version number in TrajectoryFileInfo:";
-export const makeMissingDisplayTypeErrorMessage = (
-    key: string,
-    url: string
-): string => {
+export const makeMissingDisplayTypeErrorMessage = (key: string, url: string): string => {
     if (url) {
         return `Missing typeMapping[${key}].geometry.displayType, so we couldn't request ${url}. Geometry will default to spheres`;
     } else {
@@ -53,63 +45,50 @@ export const sanitizeAgentMapGeometryData = (
     typeMapping: EncodedTypeMappingPreProcessing,
     onError?: (error: FrontEndError) => void
 ): { [key: number]: AgentDisplayDataWithGeometry } => {
-    return mapValues(
-        typeMapping,
-        (value: AgentDisplayDataPreProcessing, key) => {
-            let geometry = {};
-            if (value.geometry) {
-                let url = value.geometry.url || "";
-                let { displayType } = value.geometry;
-                if (!displayType) {
-                    // we're relying on the data to have a displayType to tell us what sort of data the url is pointing at
-                    // if the user fails to provide the displayType, we'll default to loading a sphere, and clear out the url
-                    const message = makeMissingDisplayTypeErrorMessage(
-                        key,
-                        url
-                    );
-                    if (onError) {
-                        onError(new FrontEndError(message, ErrorLevel.WARNING));
-                    } else {
-                        console.log(message);
-                    }
-                    url = "";
-                    displayType = GeometryDisplayType.SPHERE;
-                } else if (
-                    !url &&
-                    (displayType === GeometryDisplayType.PDB ||
-                        displayType === GeometryDisplayType.OBJ)
-                ) {
-                    const message = makeMissingUrlErrorMessage(
-                        key,
-                        displayType
-                    );
-                    if (onError) {
-                        onError(new FrontEndError(message, ErrorLevel.WARNING));
-                    } else {
-                        console.log(message);
-                    }
-                    displayType = GeometryDisplayType.SPHERE;
+    return mapValues(typeMapping, (value: AgentDisplayDataPreProcessing, key) => {
+        let geometry = {};
+        if (value.geometry) {
+            let url = value.geometry.url || "";
+            let { displayType } = value.geometry;
+            if (!displayType) {
+                // we're relying on the data to have a displayType to tell us what sort of data the url is pointing at
+                // if the user fails to provide the displayType, we'll default to loading a sphere, and clear out the url
+                const message = makeMissingDisplayTypeErrorMessage(key, url);
+                if (onError) {
+                    onError(new FrontEndError(message, ErrorLevel.WARNING));
+                } else {
+                    console.log(message);
                 }
-
-                geometry = {
-                    ...value.geometry,
-                    displayType,
-                    url,
-                    color: value.geometry.color || "",
-                };
-            } else {
-                geometry = {
-                    displayType: "SPHERE",
-                    url: "",
-                    color: "",
-                };
+                url = "";
+                displayType = GeometryDisplayType.SPHERE;
+            } else if (!url && (displayType === GeometryDisplayType.PDB || displayType === GeometryDisplayType.OBJ)) {
+                const message = makeMissingUrlErrorMessage(key, displayType);
+                if (onError) {
+                    onError(new FrontEndError(message, ErrorLevel.WARNING));
+                } else {
+                    console.log(message);
+                }
+                displayType = GeometryDisplayType.SPHERE;
             }
-            return {
-                ...value,
-                geometry,
-            } as AgentDisplayDataWithGeometry;
+
+            geometry = {
+                ...value.geometry,
+                displayType,
+                url,
+                color: value.geometry.color || "",
+            };
+        } else {
+            geometry = {
+                displayType: "SPHERE",
+                url: "",
+                color: "",
+            };
         }
-    );
+        return {
+            ...value,
+            geometry,
+        } as AgentDisplayDataWithGeometry;
+    });
 };
 
 export const updateTrajectoryFileInfoFormat = (
@@ -131,9 +110,7 @@ export const updateTrajectoryFileInfoFormat = (
             const v1Data = msg as TrajectoryFileInfoV1;
 
             // Ex: 1.5e-9 -> [1.5, "nm"]
-            const spatialUnitsArray = si.meter.convert(
-                v1Data.spatialUnitFactorMeters
-            );
+            const spatialUnitsArray = si.meter.convert(v1Data.spatialUnitFactorMeters);
             const spatialUnitsMagnitude = spatialUnitsArray[0];
             // The si-prefix library abbreviates "micro" as "mc", so swap it out with "µ"
             const spatialUnitsName = spatialUnitsArray[1].replace("mc", "µ");
@@ -158,9 +135,7 @@ export const updateTrajectoryFileInfoFormat = (
                 typeMapping: output.typeMapping,
                 version: LATEST_VERSION,
             };
-            console.warn(
-                "Using default camera settings since none were provided"
-            );
+            console.warn("Using default camera settings since none were provided");
             break;
         default:
             throw new RangeError(VERSION_NUM_ERROR + msg.version);
diff --git a/src/test/BinaryFile.test.ts b/src/test/BinaryFile.test.ts
index 4d552699..21a20640 100644
--- a/src/test/BinaryFile.test.ts
+++ b/src/test/BinaryFile.test.ts
@@ -2,9 +2,7 @@ import BinaryFileReader from "../simularium/BinaryFileReader";
 
 function pad(buf: ArrayBuffer): ArrayBuffer {
     if (buf.byteLength % 4 !== 0) {
-        const newbuf = new ArrayBuffer(
-            buf.byteLength + (4 - (buf.byteLength % 4))
-        );
+        const newbuf = new ArrayBuffer(buf.byteLength + (4 - (buf.byteLength % 4)));
         new Uint8Array(newbuf).set(new Uint8Array(buf));
         // unnecessary, because ArrayBuffer is initialized to 0
         // new Uint8Array(newbuf, buf.byteLength).fill(0);
@@ -17,15 +15,10 @@ function makeBinary(blocks: ArrayBuffer[], blockTypes: number[]): ArrayBuffer {
     const tocLen = 3 * numBlocks * 4;
     const headerLen = headerfixedLen + tocLen;
     // extra 4 for block size and 4 for type
-    const blockDataLen = blocks.reduce(
-        (acc, block) => acc + (block.byteLength + 4 + 4),
-        0
-    );
+    const blockDataLen = blocks.reduce((acc, block) => acc + (block.byteLength + 4 + 4), 0);
     const blockOffsets = [headerLen];
     for (let i = 1; i < numBlocks; i++) {
-        blockOffsets.push(
-            blockOffsets[i - 1] + (blocks[i - 1].byteLength + 4 + 4)
-        );
+        blockOffsets.push(blockOffsets[i - 1] + (blocks[i - 1].byteLength + 4 + 4));
     }
     // enough space for the whole thing
     const buffer = new ArrayBuffer(headerfixedLen + tocLen + blockDataLen);
@@ -55,49 +48,41 @@ function makeBinary(blocks: ArrayBuffer[], blockTypes: number[]): ArrayBuffer {
 describe("binary simularium files", () => {
     test("it correctly identifies a binary simularium file signature", () => {
         const file = new Blob(["SIMULARIUMBINARY"]);
-        return BinaryFileReader.isBinarySimulariumFile(file).then(
-            (isBinary) => {
-                expect(isBinary).toBe(true);
-            }
-        );
+        return BinaryFileReader.isBinarySimulariumFile(file).then((isBinary) => {
+            expect(isBinary).toBe(true);
+        });
     });
     test("it correctly identifies an invalid binary simularium file signature", () => {
         const file = new Blob(["SIMULARIUMBINAR"]);
-        return BinaryFileReader.isBinarySimulariumFile(file).then(
-            (isBinary) => {
-                expect(isBinary).toBe(false);
-            }
-        );
+        return BinaryFileReader.isBinarySimulariumFile(file).then((isBinary) => {
+            expect(isBinary).toBe(false);
+        });
     });
     // build a header with no blocks.
     test("it correctly fails to read a file with no blocks", () => {
         const buffer = makeBinary([], []);
         const file = new Blob([buffer]);
-        return BinaryFileReader.isBinarySimulariumFile(file).then(
-            (isBinary) => {
-                expect(isBinary).toBe(true);
-                file.arrayBuffer().then((buffer) => {
-                    expect(() => {
-                        new BinaryFileReader(buffer);
-                    }).toThrow();
-                });
-            }
-        );
+        return BinaryFileReader.isBinarySimulariumFile(file).then((isBinary) => {
+            expect(isBinary).toBe(true);
+            file.arrayBuffer().then((buffer) => {
+                expect(() => {
+                    new BinaryFileReader(buffer);
+                }).toThrow();
+            });
+        });
     });
     test("it throws when a spatial data block is missing", () => {
         const json = '{"foo":"bar"}';
         const buffer = makeBinary([pad(new TextEncoder().encode(json))], [1]);
         const file = new Blob([buffer]);
-        return BinaryFileReader.isBinarySimulariumFile(file).then(
-            (isBinary) => {
-                expect(isBinary).toBe(true);
-                file.arrayBuffer().then((buffer) => {
-                    expect(() => {
-                        new BinaryFileReader(buffer);
-                    }).toThrow("No spatial data block found");
-                });
-            }
-        );
+        return BinaryFileReader.isBinarySimulariumFile(file).then((isBinary) => {
+            expect(isBinary).toBe(true);
+            file.arrayBuffer().then((buffer) => {
+                expect(() => {
+                    new BinaryFileReader(buffer);
+                }).toThrow("No spatial data block found");
+            });
+        });
     });
     test("it correctly initializes a file with one json block, one spatial block, and one plotdata block", () => {
         const tjijson = {
@@ -119,21 +104,19 @@ describe("binary simularium files", () => {
             [1, 3, 2]
         );
         const file = new Blob([buffer]);
-        return BinaryFileReader.isBinarySimulariumFile(file).then(
-            (isBinary) => {
-                expect(isBinary).toBe(true);
-                file.arrayBuffer().then((buffer) => {
-                    expect(() => {
-                        const reader = new BinaryFileReader(buffer);
-                        const tji = reader.getTrajectoryFileInfo();
-                        expect(tji).toHaveProperty("totalSteps", 1);
-                        const plotData = reader.getPlotData();
-                        expect(plotData).toHaveProperty("baz", "bat");
-                        const nframes = reader.getNumFrames();
-                        expect(nframes).toBe(0);
-                    }).not.toThrow();
-                });
-            }
-        );
+        return BinaryFileReader.isBinarySimulariumFile(file).then((isBinary) => {
+            expect(isBinary).toBe(true);
+            file.arrayBuffer().then((buffer) => {
+                expect(() => {
+                    const reader = new BinaryFileReader(buffer);
+                    const tji = reader.getTrajectoryFileInfo();
+                    expect(tji).toHaveProperty("totalSteps", 1);
+                    const plotData = reader.getPlotData();
+                    expect(plotData).toHaveProperty("baz", "bat");
+                    const nframes = reader.getNumFrames();
+                    expect(nframes).toBe(0);
+                }).not.toThrow();
+            });
+        });
     });
 });
diff --git a/src/test/ColorHandler.test.ts b/src/test/ColorHandler.test.ts
index 44e444f2..43aecb85 100644
--- a/src/test/ColorHandler.test.ts
+++ b/src/test/ColorHandler.test.ts
@@ -18,12 +18,8 @@ describe("ColorHandler", () => {
     });
     describe("updateColorArray", () => {
         test("sets colorsData with 4 values for each color", () => {
-            expect((colorHandler as any).colorsData).toHaveLength(
-                initialColorData.length * 4
-            );
-            expect((colorHandler as any).numberOfColors).toBe(
-                initialColorData.length
-            );
+            expect((colorHandler as any).colorsData).toHaveLength(initialColorData.length * 4);
+            expect((colorHandler as any).numberOfColors).toBe(initialColorData.length);
         });
     });
     describe("convertDataColorIndexToId", () => {
@@ -48,18 +44,14 @@ describe("ColorHandler", () => {
     describe("getColorDataIndex", () => {
         test("it returns the index into the colorData array of an existing color", () => {
             for (let i = 0; i < initialColorData.length; i++) {
-                const colorNumber = convertColorStringToNumber(
-                    initialColorData[i]
-                );
+                const colorNumber = convertColorStringToNumber(initialColorData[i]);
                 const newColor = [
                     ((colorNumber & 0x00ff0000) >> 16) / 255.0,
                     ((colorNumber & 0x0000ff00) >> 8) / 255.0,
                     ((colorNumber & 0x000000ff) >> 0) / 255.0,
                     1.0,
                 ];
-                expect((colorHandler as any).getColorDataIndex(newColor)).toBe(
-                    i * 4
-                );
+                expect((colorHandler as any).getColorDataIndex(newColor)).toBe(i * 4);
             }
         });
         test("it returns -1 if the color is not found", () => {
@@ -90,12 +82,8 @@ describe("ColorHandler", () => {
             expect(actualColor).toEqual((colorHandler as any).getColorById(0));
         });
         test("it loops around if the id is out of range", () => {
-            expect((colorHandler as any).getColorById(4)).toEqual(
-                (colorHandler as any).getColorById(0)
-            );
-            expect((colorHandler as any).getColorById(5)).toEqual(
-                (colorHandler as any).getColorById(1)
-            );
+            expect((colorHandler as any).getColorById(4)).toEqual((colorHandler as any).getColorById(0));
+            expect((colorHandler as any).getColorById(5)).toEqual((colorHandler as any).getColorById(1));
         });
     });
 });
diff --git a/src/test/Curve.test.ts b/src/test/Curve.test.ts
index 005c7b11..2cd8741e 100644
--- a/src/test/Curve.test.ts
+++ b/src/test/Curve.test.ts
@@ -6,20 +6,11 @@ import { Vector2, Vector3, Vector4 } from "three";
 
 // verify that T,N,B are non zero vecs and all perp
 function allzero(v: Vector3, epsilon = 0.0001): boolean {
-    return (
-        Math.abs(v.x) < epsilon &&
-        Math.abs(v.y) < epsilon &&
-        Math.abs(v.z) < epsilon
-    );
+    return Math.abs(v.x) < epsilon && Math.abs(v.y) < epsilon && Math.abs(v.z) < epsilon;
 }
 
 function initCubicPolynomial(x0, x1, t0, t1): Vector4 {
-    return new Vector4(
-        x0,
-        t0,
-        -3.0 * x0 + 3.0 * x1 - 2.0 * t0 - t1,
-        2.0 * x0 - 2.0 * x1 + t0 + t1
-    );
+    return new Vector4(x0, t0, -3.0 * x0 + 3.0 * x1 - 2.0 * t0 - t1, 2.0 * x0 - 2.0 * x1 + t0 + t1);
 }
 function calcCubicPolynomial(t: number, c: Vector4): number {
     const t2 = t * t;
@@ -135,15 +126,11 @@ function createTube(
     // if next-prev and next+prev are parallel, then
     // our normal and binormal will be ill-defined so we need to check for that
     // check parallel by dot the unit vectors and check close to +/-1
-    const check = new Vector3()
-        .copy(vT)
-        .dot(new Vector3().copy(next).add(prev).normalize());
+    const check = new Vector3().copy(vT).dot(new Vector3().copy(next).add(prev).normalize());
     if (Math.abs(check) < 0.999) {
         // cross product of parallel vectors is 0, so T must not be parallel to next+prev
         // hence the above check.
-        vB.copy(
-            new Vector3().copy(next).add(prev).normalize().cross(vT).normalize()
-        );
+        vB.copy(new Vector3().copy(next).add(prev).normalize().cross(vT).normalize());
     } else {
         // special case for which N and B are not well defined.
         // so we will just pick something
@@ -174,11 +161,7 @@ function createTube(
     const bx = new Vector3().copy(vB).multiplyScalar(circX);
     const ny = new Vector3().copy(vN).multiplyScalar(circY);
     normal.copy(new Vector3().copy(bx).add(ny).normalize()); //xyz = normalize(B * circX + N * circY);
-    offset.copy(
-        sampleCurve(t, points)
-            .add(bx.multiplyScalar(volume.x))
-            .add(ny.multiplyScalar(volume.y))
-    ); //.xyz = sampleCurve(t) + B * volume.x * circX + N * volume.y * circY;
+    offset.copy(sampleCurve(t, points).add(bx.multiplyScalar(volume.x)).add(ny.multiplyScalar(volume.y))); //.xyz = sampleCurve(t) + B * volume.x * circX + N * volume.y * circY;
 }
 
 function walkCurve(points) {
@@ -200,17 +183,7 @@ function walkCurve(points) {
     // walk along whole curve
     const nsteps = 8;
     for (let t = 0; t < 1.0; t += 1.0 / nsteps) {
-        createTube(
-            points,
-            t,
-            angle,
-            volume,
-            transformed,
-            objectNormal,
-            T,
-            B,
-            N
-        );
+        createTube(points, t, angle, volume, transformed, objectNormal, T, B, N);
 
         expect(allzero(T)).toBe(false);
         expect(allzero(B)).toBe(false);
@@ -226,17 +199,11 @@ function walkCurve(points) {
 
 describe("Test curve", () => {
     test("on-axis curve computes valid positions", () => {
-        const points: Vector3[] = [
-            new Vector3(-70, 0, 0),
-            new Vector3(10, 0, 0),
-        ];
+        const points: Vector3[] = [new Vector3(-70, 0, 0), new Vector3(10, 0, 0)];
         walkCurve(points);
     });
     test("on-axis curve computes valid positions", () => {
-        const points: Vector3[] = [
-            new Vector3(10, 0, 0),
-            new Vector3(-70, 0, 0),
-        ];
+        const points: Vector3[] = [new Vector3(10, 0, 0), new Vector3(-70, 0, 0)];
         walkCurve(points);
     });
     test("very short curve computes valid positions", () => {
diff --git a/src/test/DummyRemoteSimulator.ts b/src/test/DummyRemoteSimulator.ts
index 7ebc117a..222dba61 100644
--- a/src/test/DummyRemoteSimulator.ts
+++ b/src/test/DummyRemoteSimulator.ts
@@ -1,9 +1,4 @@
-import {
-    NetConnectionParams,
-    NetMessage,
-    NetMessageEnum,
-    WebsocketClient,
-} from "../simularium/WebsocketClient";
+import { NetConnectionParams, NetMessage, NetMessageEnum, WebsocketClient } from "../simularium/WebsocketClient";
 import { RemoteSimulator } from "../simularium/RemoteSimulator";
 import { VisDataFrame, VisDataMessage } from "../simularium/types";
 
@@ -49,19 +44,7 @@ export class DummyRemoteSimulator extends RemoteSimulator {
         const data: VisDataFrame = {
             frameNumber: frameNumber,
             time: frameNumber,
-            data: [
-                1000,
-                0,
-                43,
-                Math.cos(frameNumber / 4) * 5,
-                Math.sin(frameNumber / 4) * 5,
-                0,
-                0,
-                0,
-                10,
-                1,
-                0,
-            ],
+            data: [1000, 0, 43, Math.cos(frameNumber / 4) * 5, Math.sin(frameNumber / 4) * 5, 0, 0, 0, 10, 1, 0],
         };
         msg.bundleData.push(data);
         return JSON.stringify(msg);
@@ -77,9 +60,7 @@ export class DummyRemoteSimulator extends RemoteSimulator {
             return;
         }
 
-        const msg: NetMessage = JSON.parse(
-            this.getDataBundle(this.frameCounter)
-        );
+        const msg: NetMessage = JSON.parse(this.getDataBundle(this.frameCounter));
         this.frameCounter++;
         this.onJsonIdVisDataArrive(msg);
     }
@@ -161,9 +142,7 @@ export class DummyRemoteSimulator extends RemoteSimulator {
         setTimeout(() => {
             this.frameCounter = time / this.timeStep;
 
-            const msg: NetMessage = JSON.parse(
-                this.getDataBundle(this.frameCounter)
-            );
+            const msg: NetMessage = JSON.parse(this.getDataBundle(this.frameCounter));
             this.frameCounter++;
             this.onJsonIdVisDataArrive(msg);
         }, this.commandLatencyMS);
diff --git a/src/test/GeometryStore.test.ts b/src/test/GeometryStore.test.ts
index 7698f787..48d409a0 100644
--- a/src/test/GeometryStore.test.ts
+++ b/src/test/GeometryStore.test.ts
@@ -1,9 +1,6 @@
 import { Mesh } from "three";
 
-import {
-    InstancedMesh,
-    InstanceType,
-} from "../visGeometry/rendering/InstancedMesh";
+import { InstancedMesh, InstanceType } from "../visGeometry/rendering/InstancedMesh";
 import GeometryStore, { DEFAULT_MESH_NAME } from "../visGeometry/GeometryStore";
 import { GeometryDisplayType } from "../visGeometry/types";
 import PDBModel from "../visGeometry/PDBModel";
@@ -25,12 +22,7 @@ describe("GeometryStore module", () => {
                 geometry: {
                     mesh: new Mesh(GeometryStore.sphereGeometry),
                     cancelled: false,
-                    instances: new InstancedMesh(
-                        InstanceType.MESH,
-                        GeometryStore.sphereGeometry,
-                        addedItem,
-                        1
-                    ),
+                    instances: new InstancedMesh(InstanceType.MESH, GeometryStore.sphereGeometry, addedItem, 1),
                 },
             });
             expect(registry.get(addedItem)).toBeTruthy();
@@ -104,12 +96,7 @@ describe("GeometryStore module", () => {
                 geometry: {
                     mesh: new Mesh(GeometryStore.sphereGeometry),
                     cancelled: false,
-                    instances: new InstancedMesh(
-                        InstanceType.MESH,
-                        GeometryStore.sphereGeometry,
-                        addedItem,
-                        1
-                    ),
+                    instances: new InstancedMesh(InstanceType.MESH, GeometryStore.sphereGeometry, addedItem, 1),
                 },
             });
             registry.forEach((value) => {
@@ -175,12 +162,8 @@ describe("GeometryStore module", () => {
 
             expect(returned).toBeTruthy();
             if (returned) {
-                expect(returned.displayType).toEqual(
-                    GeometryDisplayType.SPHERE
-                );
-                expect(returned.errorMessage).toEqual(
-                    "Failed to load mesh: /test"
-                );
+                expect(returned.displayType).toEqual(GeometryDisplayType.SPHERE);
+                expect(returned.errorMessage).toEqual("Failed to load mesh: /test");
             }
         });
     });
diff --git a/src/test/RemoteSimulator.test.ts b/src/test/RemoteSimulator.test.ts
index 878d0045..f88014ef 100644
--- a/src/test/RemoteSimulator.test.ts
+++ b/src/test/RemoteSimulator.test.ts
@@ -1,7 +1,4 @@
-import {
-    CONNECTION_SUCCESS_MSG,
-    CONNECTION_FAIL_MSG,
-} from "../simularium/WebsocketClient";
+import { CONNECTION_SUCCESS_MSG, CONNECTION_FAIL_MSG } from "../simularium/WebsocketClient";
 import { FrontEndError } from "../simularium/FrontEndError";
 import { RemoteSimulator } from "..";
 import { WebsocketClient } from "../simularium/WebsocketClient";
@@ -33,55 +30,35 @@ describe("RemoteSimulator", () => {
         test("returns true if connection succeeds within allotted time with no retries", async () => {
             const websocketClient = new WebsocketClient(CONNECTION_SETTINGS);
             const simulator = new RemoteSimulator(websocketClient);
-            jest.spyOn(websocketClient, "waitForWebSocket").mockResolvedValue(
-                true
-            );
+            jest.spyOn(websocketClient, "waitForWebSocket").mockResolvedValue(true);
 
-            const isConnected = await websocketClient.checkConnection(
-                simulator.getIp(),
-                timeout
-            );
+            const isConnected = await websocketClient.checkConnection(simulator.getIp(), timeout);
             expect(isConnected).toBe(true);
-            expect(simulator.webSocketClient.connectionTimeWaited).toBe(
-                timeout
-            );
+            expect(simulator.webSocketClient.connectionTimeWaited).toBe(timeout);
             expect(simulator.webSocketClient.connectionRetries).toBe(0);
         });
         test("returns false if connection does not succeed within allotted time and number of retries", async () => {
             const websocketClient = new WebsocketClient(CONNECTION_SETTINGS);
             const simulator = new RemoteSimulator(websocketClient);
-            jest.spyOn(websocketClient, "waitForWebSocket").mockResolvedValue(
-                false
-            );
+            jest.spyOn(websocketClient, "waitForWebSocket").mockResolvedValue(false);
 
-            const isConnected = await websocketClient.checkConnection(
-                simulator.getIp(),
-                timeout
-            );
+            const isConnected = await websocketClient.checkConnection(simulator.getIp(), timeout);
             expect(isConnected).toBe(false);
             // Expect 4 timeouts on initial connection + 1 timeout on retry connection
-            expect(simulator.webSocketClient.connectionTimeWaited).toBe(
-                timeout * 5
-            );
+            expect(simulator.webSocketClient.connectionTimeWaited).toBe(timeout * 5);
             expect(simulator.webSocketClient.connectionRetries).toBe(1);
         });
         test("returns true if connection succeeds on the retry", async () => {
             const websocketClient = new WebsocketClient(CONNECTION_SETTINGS);
             const simulator = new RemoteSimulator(websocketClient);
-            const waitForWebSocket = jest.spyOn(
-                websocketClient,
-                "waitForWebSocket"
-            );
+            const waitForWebSocket = jest.spyOn(websocketClient, "waitForWebSocket");
             waitForWebSocket.mockResolvedValueOnce(false);
             waitForWebSocket.mockResolvedValueOnce(false);
             waitForWebSocket.mockResolvedValueOnce(false);
             waitForWebSocket.mockResolvedValueOnce(false);
             waitForWebSocket.mockResolvedValueOnce(true);
 
-            const isConnected = await websocketClient.checkConnection(
-                simulator.getIp(),
-                timeout
-            );
+            const isConnected = await websocketClient.checkConnection(simulator.getIp(), timeout);
             expect(isConnected).toBe(true);
             // Expect 4 timeouts on initial connection + 1 timeout on retry connection
             expect(websocketClient.connectionTimeWaited).toBe(timeout * 5);
@@ -92,18 +69,14 @@ describe("RemoteSimulator", () => {
     describe("connectToRemoteServer", () => {
         test("emits a 'connection success' message if connection succeeds", async () => {
             const websocketClient = new WebsocketClient(CONNECTION_SETTINGS);
-            jest.spyOn(websocketClient, "checkConnection").mockResolvedValue(
-                true
-            );
+            jest.spyOn(websocketClient, "checkConnection").mockResolvedValue(true);
 
             const message = await websocketClient.connectToRemoteServer();
             expect(message).toEqual(CONNECTION_SUCCESS_MSG);
         });
         test("emits error if connecting to server is unsuccessful", async () => {
             const websocketClient = new WebsocketClient(CONNECTION_SETTINGS);
-            jest.spyOn(websocketClient, "checkConnection").mockResolvedValue(
-                false
-            );
+            jest.spyOn(websocketClient, "checkConnection").mockResolvedValue(false);
 
             try {
                 await websocketClient.connectToRemoteServer();
@@ -117,28 +90,17 @@ describe("RemoteSimulator", () => {
         test("does not throw error if connectToRemoteServer succeeds", async () => {
             const websocketClient = new WebsocketClient(CONNECTION_SETTINGS);
             const simulator = new RemoteSimulator(websocketClient);
-            jest.spyOn(simulator, "connectToRemoteServer").mockResolvedValue(
-                CONNECTION_SUCCESS_MSG
-            );
+            jest.spyOn(simulator, "connectToRemoteServer").mockResolvedValue(CONNECTION_SUCCESS_MSG);
 
-            expect(
-                async () =>
-                    await simulator.startRemoteTrajectoryPlayback(
-                        "endocytosis.simularium"
-                    )
-            ).not.toThrow();
+            expect(async () => await simulator.startRemoteTrajectoryPlayback("endocytosis.simularium")).not.toThrow();
         });
         test("throws error emitted by connectToRemoteServer as a FrontEndError if connection fails", async () => {
             const websocketClient = new WebsocketClient(CONNECTION_SETTINGS);
             const simulator = new RemoteSimulator(websocketClient);
-            jest.spyOn(simulator, "connectToRemoteServer").mockRejectedValue(
-                new Error("Mock error message")
-            );
+            jest.spyOn(simulator, "connectToRemoteServer").mockRejectedValue(new Error("Mock error message"));
 
             try {
-                await simulator.startRemoteTrajectoryPlayback(
-                    "endocytosis.simularium"
-                );
+                await simulator.startRemoteTrajectoryPlayback("endocytosis.simularium");
             } catch (error) {
                 expect(error).toEqual(new FrontEndError("Mock error message"));
             }
diff --git a/src/test/SelectionInterface.test.ts b/src/test/SelectionInterface.test.ts
index a8fd1ec0..ec28d414 100644
--- a/src/test/SelectionInterface.test.ts
+++ b/src/test/SelectionInterface.test.ts
@@ -1,9 +1,6 @@
 import { mapValues } from "lodash";
 import { EncodedTypeMapping, SelectionInterface } from "../simularium";
-import {
-    UIDisplayData,
-    UIDisplayEntry,
-} from "../simularium/SelectionInterface";
+import { UIDisplayData, UIDisplayEntry } from "../simularium/SelectionInterface";
 
 const idMapping = {
     0: { name: "A" },
@@ -360,66 +357,46 @@ describe("SelectionInterface module", () => {
             const si = new SelectionInterface();
             si.parse(idMapping);
             const uiDisplayData = si.getUIDisplayData();
-            const uiDisplayDataForA = uiDisplayData.find(
-                (entry) => entry.name === "A"
-            );
-            const uiDisplayDataForB = uiDisplayData.find(
-                (entry) => entry.name === "B"
-            );
-            const uiDisplayDataForC = uiDisplayData.find(
-                (entry) => entry.name === "C"
-            );
+            const uiDisplayDataForA = uiDisplayData.find((entry) => entry.name === "A");
+            const uiDisplayDataForB = uiDisplayData.find((entry) => entry.name === "B");
+            const uiDisplayDataForC = uiDisplayData.find((entry) => entry.name === "C");
             const unmodifiedDisplayState = {
                 name: "<unmodified>",
                 id: "",
                 color: "",
             };
             expect(uiDisplayDataForA?.displayStates.length).toEqual(3);
-            expect(uiDisplayDataForA?.displayStates).toContainEqual(
-                unmodifiedDisplayState
-            );
+            expect(uiDisplayDataForA?.displayStates).toContainEqual(unmodifiedDisplayState);
             expect(uiDisplayDataForB?.displayStates.length).toEqual(3);
-            expect(uiDisplayDataForB?.displayStates).toContainEqual(
-                unmodifiedDisplayState
-            );
+            expect(uiDisplayDataForB?.displayStates).toContainEqual(unmodifiedDisplayState);
             expect(uiDisplayDataForC?.displayStates.length).toEqual(3);
-            expect(uiDisplayDataForC?.displayStates).toContainEqual(
-                unmodifiedDisplayState
-            );
+            expect(uiDisplayDataForC?.displayStates).toContainEqual(unmodifiedDisplayState);
         });
         test("It doesn't add an unmodified state to agents that don't have one", () => {
             const si = new SelectionInterface();
             si.parse(idMapping);
             const uiDisplayData = si.getUIDisplayData();
-            const uiDisplayDataForE = uiDisplayData.find(
-                (entry) => entry.name === "E"
-            );
+            const uiDisplayDataForE = uiDisplayData.find((entry) => entry.name === "E");
             const unmodifiedDisplayState = {
                 name: "<unmodified>",
                 id: "",
                 color: "",
             };
             expect(uiDisplayDataForE?.displayStates.length).toEqual(1);
-            expect(uiDisplayDataForE?.displayStates).not.toContainEqual(
-                unmodifiedDisplayState
-            );
+            expect(uiDisplayDataForE?.displayStates).not.toContainEqual(unmodifiedDisplayState);
         });
         test("It doesn't include unmodified state if there are no other tags", () => {
             const si = new SelectionInterface();
             si.parse(idMapping);
             const uiDisplayData = si.getUIDisplayData();
-            const uiDisplayDataForD = uiDisplayData.find(
-                (entry) => entry.name === "D"
-            );
+            const uiDisplayDataForD = uiDisplayData.find((entry) => entry.name === "D");
             const unmodifiedDisplayState = {
                 name: "<unmodified>",
                 id: "",
                 color: "",
             };
             expect(uiDisplayDataForD?.displayStates.length).toEqual(0);
-            expect(uiDisplayDataForD?.displayStates).not.toContainEqual(
-                unmodifiedDisplayState
-            );
+            expect(uiDisplayDataForD?.displayStates).not.toContainEqual(unmodifiedDisplayState);
         });
     });
 
@@ -481,34 +458,18 @@ describe("SelectionInterface module", () => {
             si = new SelectionInterface();
             si.parse(idMappingWithColors as EncodedTypeMapping);
             uiDisplayData = si.getUIDisplayData();
-            uiDisplayDataForA = uiDisplayData.find(
-                (entry) => entry.name === "A"
-            );
-            uiDisplayDataForB = uiDisplayData.find(
-                (entry) => entry.name === "B"
-            );
-            uiDisplayDataForE = uiDisplayData.find(
-                (entry) => entry.name === "E"
-            );
-            uiDisplayDataForF = uiDisplayData.find(
-                (entry) => entry.name === "F"
-            );
-            uiDisplayDataForG = uiDisplayData.find(
-                (entry) => entry.name === "G"
-            );
+            uiDisplayDataForA = uiDisplayData.find((entry) => entry.name === "A");
+            uiDisplayDataForB = uiDisplayData.find((entry) => entry.name === "B");
+            uiDisplayDataForE = uiDisplayData.find((entry) => entry.name === "E");
+            uiDisplayDataForF = uiDisplayData.find((entry) => entry.name === "F");
+            uiDisplayDataForG = uiDisplayData.find((entry) => entry.name === "G");
         });
 
         test("it will create a new material for each of the use defined colors", () => {
             const numberOfNewColors = Object.keys(agentColors).length + 2; // two additional colors for G
-            const updatedColors = si.setInitialAgentColors(
-                uiDisplayData,
-                colorList,
-                setColorForIds
-            );
+            const updatedColors = si.setInitialAgentColors(uiDisplayData, colorList, setColorForIds);
 
-            expect(updatedColors.length).toEqual(
-                numberOfNewColors + defaultColorListLength
-            );
+            expect(updatedColors.length).toEqual(numberOfNewColors + defaultColorListLength);
         });
 
         test("it set the entry color to the 'unmodified' state color if provided", () => {
@@ -524,15 +485,11 @@ describe("SelectionInterface module", () => {
             expect(uiDisplayDataForE?.color).toEqual("");
             si.setInitialAgentColors(uiDisplayData, colorList, setColorForIds);
             expect(uiDisplayDataForE?.color).toEqual("#00");
-            expect(setColorForIds).toHaveBeenCalledWith(
-                expect.arrayContaining([{ agentIds: [13], color: "#00" }])
-            );
+            expect(setColorForIds).toHaveBeenCalledWith(expect.arrayContaining([{ agentIds: [13], color: "#00" }]));
         });
         test("If no user colors are provided all the ids for an entry will get a default color", () => {
             si.setInitialAgentColors(uiDisplayData, colorList, setColorForIds);
-            expect(setColorForIds).toHaveBeenCalledWith(
-                expect.arrayContaining([{ agentIds: [13], color: "#00" }])
-            );
+            expect(setColorForIds).toHaveBeenCalledWith(expect.arrayContaining([{ agentIds: [13], color: "#00" }]));
         });
         test("if all the colors are the same, the parent entry will also get that color, even if no unmodified color set", () => {
             si.setInitialAgentColors(uiDisplayData, colorList, setColorForIds);
diff --git a/src/test/VisData.test.ts b/src/test/VisData.test.ts
index ce533e87..ff948387 100644
--- a/src/test/VisData.test.ts
+++ b/src/test/VisData.test.ts
@@ -1,13 +1,5 @@
-import {
-    VisData,
-    VisDataMessage,
-    NetMessageEnum,
-    FrontEndError,
-} from "../simularium";
-import {
-    calculateBufferSize,
-    parseVisDataMessage,
-} from "../simularium/VisDataParse";
+import { VisData, VisDataMessage, NetMessageEnum, FrontEndError } from "../simularium";
+import { calculateBufferSize, parseVisDataMessage } from "../simularium/VisDataParse";
 import { AGENT_OBJECT_KEYS, CachedFrame } from "../simularium/types";
 import { nullCachedFrame } from "../util";
 
@@ -90,8 +82,7 @@ describe("VisData module", () => {
             const HEADER_SIZE = 3; // frameNumber, time, agentCount
             const FRAME_DATA_SIZE = AGENT_OBJECT_KEYS.length;
             const nSubpoints = testData[10];
-            const expectedSize =
-                (HEADER_SIZE + FRAME_DATA_SIZE + nSubpoints) * 4;
+            const expectedSize = (HEADER_SIZE + FRAME_DATA_SIZE + nSubpoints) * 4;
             const result = calculateBufferSize(testData);
             expect(result).toEqual(expectedSize);
         });
@@ -165,9 +156,7 @@ describe("VisData module", () => {
                 bundleStart: 0,
                 fileName: "",
             };
-            expect(() => parseVisDataMessage(visDataMsg)).toThrow(
-                FrontEndError
-            );
+            expect(() => parseVisDataMessage(visDataMsg)).toThrow(FrontEndError);
         });
         test("currentFrame returns null frame when cache is empty", () => {
             const visData = new VisData();
diff --git a/src/test/WebsocketClient.test.ts b/src/test/WebsocketClient.test.ts
index 8b5084be..a2ad1c64 100644
--- a/src/test/WebsocketClient.test.ts
+++ b/src/test/WebsocketClient.test.ts
@@ -1,8 +1,4 @@
-import {
-    WebsocketClient,
-    NetMessageEnum,
-    MessageEventLike,
-} from "../simularium/WebsocketClient";
+import { WebsocketClient, NetMessageEnum, MessageEventLike } from "../simularium/WebsocketClient";
 
 class TestWebsocketClient extends WebsocketClient {
     // exposing the protected onMessage() method for testing purposes
@@ -23,10 +19,7 @@ describe("WebsocketClient", () => {
 
         test("handles defined websocket event", () => {
             const mockCallback = jest.fn((x) => x["data"]);
-            websocketClient.addJsonMessageHandler(
-                NetMessageEnum.ID_CONVERT_TRAJECTORY_FILE,
-                mockCallback
-            );
+            websocketClient.addJsonMessageHandler(NetMessageEnum.ID_CONVERT_TRAJECTORY_FILE, mockCallback);
             const definedEvent = {
                 data: JSON.stringify({
                     msgType: NetMessageEnum.ID_CONVERT_TRAJECTORY_FILE,
@@ -42,10 +35,7 @@ describe("WebsocketClient", () => {
         test("ignores websocket events that don't have a defined handler", () => {
             const mockCallback = jest.fn((x) => x["data"]);
 
-            websocketClient.addJsonMessageHandler(
-                NetMessageEnum.ID_CONVERT_TRAJECTORY_FILE,
-                mockCallback
-            );
+            websocketClient.addJsonMessageHandler(NetMessageEnum.ID_CONVERT_TRAJECTORY_FILE, mockCallback);
             const randomEvent0 = {
                 data: JSON.stringify({
                     msgType: NetMessageEnum.ID_MODEL_DEFINITION,
@@ -68,14 +58,8 @@ describe("WebsocketClient", () => {
             const mockCallback0 = jest.fn((x) => x["data"]);
             const mockCallback1 = jest.fn((x) => x["data"]);
 
-            websocketClient.addJsonMessageHandler(
-                NetMessageEnum.ID_CONVERT_TRAJECTORY_FILE,
-                mockCallback0
-            );
-            websocketClient.addJsonMessageHandler(
-                NetMessageEnum.ID_MODEL_DEFINITION,
-                mockCallback1
-            );
+            websocketClient.addJsonMessageHandler(NetMessageEnum.ID_CONVERT_TRAJECTORY_FILE, mockCallback0);
+            websocketClient.addJsonMessageHandler(NetMessageEnum.ID_MODEL_DEFINITION, mockCallback1);
             const definedEvent0 = {
                 data: JSON.stringify({
                     msgType: NetMessageEnum.ID_CONVERT_TRAJECTORY_FILE,
diff --git a/src/test/color-utils.test.ts b/src/test/color-utils.test.ts
index c312fa2a..32e4ce4d 100644
--- a/src/test/color-utils.test.ts
+++ b/src/test/color-utils.test.ts
@@ -1,7 +1,4 @@
-import {
-    convertColorStringToNumber,
-    convertColorNumberToString,
-} from "../visGeometry/ColorHandler";
+import { convertColorStringToNumber, convertColorNumberToString } from "../visGeometry/ColorHandler";
 
 describe("VisGeometry color-utils", () => {
     describe("convertColorStringToNumber", () => {
diff --git a/src/test/util.test.ts b/src/test/util.test.ts
index f7474906..1d228e79 100644
--- a/src/test/util.test.ts
+++ b/src/test/util.test.ts
@@ -1,48 +1,27 @@
 import { FrontEndError } from "../simularium";
-import {
-    checkAndSanitizePath,
-    compareTimes,
-    getAgentDataFromBuffer,
-    getNextAgentOffset,
-} from "../util";
+import { checkAndSanitizePath, compareTimes, getAgentDataFromBuffer, getNextAgentOffset } from "../util";
 
 describe("util", () => {
     describe("compareTimes", () => {
         const PRECISION_REF = 0.1;
 
         test("it correctly determines time1 > time2", () => {
-            const result = compareTimes(
-                14.699999809265137,
-                14.6,
-                PRECISION_REF
-            );
+            const result = compareTimes(14.699999809265137, 14.6, PRECISION_REF);
             expect(result).toEqual(1);
         });
 
         test("it correctly determines time1 < time2", () => {
-            const result = compareTimes(
-                14.600000381469727,
-                14.699999809265137,
-                PRECISION_REF
-            );
+            const result = compareTimes(14.600000381469727, 14.699999809265137, PRECISION_REF);
             expect(result).toEqual(-1);
         });
 
         test("it correctly determines time1 ~= time2 when time1 is slightly greater", () => {
-            const result = compareTimes(
-                14.700000190734863,
-                14.699999809265137,
-                PRECISION_REF
-            );
+            const result = compareTimes(14.700000190734863, 14.699999809265137, PRECISION_REF);
             expect(result).toEqual(0);
         });
 
         test("it correctly determines time1 ~= time2 when time1 is slightly less", () => {
-            const result = compareTimes(
-                14.699999809265137,
-                14.7,
-                PRECISION_REF
-            );
+            const result = compareTimes(14.699999809265137, 14.7, PRECISION_REF);
             expect(result).toEqual(0);
         });
 
@@ -58,8 +37,7 @@ describe("util", () => {
             expect(result).toEqual(url);
         });
         test("it returns a dropbox url modified with dropboxusercontent", () => {
-            const url =
-                "https://www.dropbox.com/scl/fi/xh3vmyt9d74cl5cbhqgpm/Antigen.obj?rlkey=key&dl=1";
+            const url = "https://www.dropbox.com/scl/fi/xh3vmyt9d74cl5cbhqgpm/Antigen.obj?rlkey=key&dl=1";
             const expected =
                 "https://dl.dropboxusercontent.com/scl/fi/xh3vmyt9d74cl5cbhqgpm/Antigen.obj?rlkey=key&dl=1";
             expect(checkAndSanitizePath(url)).toEqual(expected);
@@ -188,16 +166,10 @@ describe("util", () => {
 
                 // Get the offset for the second agent
                 const firstAgentOffset = 0;
-                const secondAgentOffset = getNextAgentOffset(
-                    view,
-                    firstAgentOffset
-                );
+                const secondAgentOffset = getNextAgentOffset(view, firstAgentOffset);
 
                 // Parse the second agent data
-                const secondAgentData = getAgentDataFromBuffer(
-                    view,
-                    secondAgentOffset
-                );
+                const secondAgentData = getAgentDataFromBuffer(view, secondAgentOffset);
 
                 // Check that the second agent's data is parsed correctly
                 expect(secondAgentData).toEqual({
@@ -230,9 +202,7 @@ describe("util", () => {
                 const view = new Float32Array(invalidTestData);
 
                 // Expect the function to throw an error when trying to parse this invalid data
-                expect(() => getAgentDataFromBuffer(view, 0)).toThrow(
-                    FrontEndError
-                );
+                expect(() => getAgentDataFromBuffer(view, 0)).toThrow(FrontEndError);
             });
 
             test("it throws an error if the subpoints exceed available data", () => {
@@ -254,9 +224,7 @@ describe("util", () => {
                 const view = new Float32Array(incompleteSubpointsTestData);
 
                 // Expect the function to throw an error because there aren't enough subpoints
-                expect(() => getAgentDataFromBuffer(view, 0)).toThrow(
-                    FrontEndError
-                );
+                expect(() => getAgentDataFromBuffer(view, 0)).toThrow(FrontEndError);
             });
         });
     });
diff --git a/src/test/versionHandlers.test.ts b/src/test/versionHandlers.test.ts
index ce80e0e3..43ee52d6 100644
--- a/src/test/versionHandlers.test.ts
+++ b/src/test/versionHandlers.test.ts
@@ -193,9 +193,7 @@ describe("Version handlers", () => {
             const key = "1";
             const url = "";
             const message = makeMissingDisplayTypeErrorMessage(key, url);
-            expect(message).toEqual(
-                `No typeMapping[${key}].geometry.displayType. Geometry will default to spheres`
-            );
+            expect(message).toEqual(`No typeMapping[${key}].geometry.displayType. Geometry will default to spheres`);
         });
         test("it will create an error message for the user if there is a url", () => {
             const key = "1";
@@ -226,18 +224,13 @@ describe("Version handlers", () => {
             expect(result).toEqual(typeMappingWithDefaultGeo);
         });
         test("it converts to the default geo data if displayType is missing", () => {
-            const result = sanitizeAgentMapGeometryData(
-                typeMappingMissingDisplayType
-            );
+            const result = sanitizeAgentMapGeometryData(typeMappingMissingDisplayType);
             expect(result).toEqual(typeMappingWithDefaultGeo);
         });
         test("it will pass up an error message if there is a url but no displayType", () => {
             let message = "";
             const onError = (error: FrontEndError) => (message = error.message);
-            sanitizeAgentMapGeometryData(
-                typeMappingMissingDisplayType,
-                onError
-            );
+            sanitizeAgentMapGeometryData(typeMappingMissingDisplayType, onError);
             expect(message).toContain("Geometry will default to spheres");
         });
         test("it will return default geometry if there is a url but displayType is OBJ or PDB ", () => {
diff --git a/src/util.ts b/src/util.ts
index acdb612e..06ba3640 100644
--- a/src/util.ts
+++ b/src/util.ts
@@ -5,12 +5,7 @@ import { AGENT_OBJECT_KEYS, AgentData, CachedFrame } from "./simularium/types";
 import { nullAgent } from "./constants";
 import { FrontEndError } from "./simularium";
 
-export const compareTimes = (
-    time1: number,
-    time2: number,
-    timeStepSize: number,
-    stepSizeFraction = 0.01
-): number => {
+export const compareTimes = (time1: number, time2: number, timeStepSize: number, stepSizeFraction = 0.01): number => {
     /*
     Compares two time values in a series by seeing whether they are within some
     small fraction of the time step size.
@@ -37,8 +32,7 @@ export const checkAndSanitizePath = (pathOrUrl: string): string => {
      * if given a url, return it. If given a path, return it in the form "/filename" (if it already
      * has a forward slash, also return it unmodified)
      */
-    const isUrlRegEX =
-        /(https?:\/\/)([\w\-])+\.{1}([a-zA-Z]{2,63})([\/\w-]*)*\/?\??([^#\n\r]*)?#?([^\n\r]*)/g;
+    const isUrlRegEX = /(https?:\/\/)([\w\-])+\.{1}([a-zA-Z]{2,63})([\/\w-]*)*\/?\??([^#\n\r]*)?#?([^\n\r]*)/g;
     if (isUrlRegEX.test(pathOrUrl)) {
         let url = pathOrUrl;
         if (url.includes("dropbox")) {
@@ -53,10 +47,7 @@ export const checkAndSanitizePath = (pathOrUrl: string): string => {
 
 export function getFileExtension(pathOrUrl: string): string {
     // the file extension is considered to be all string contents after the last "."
-    return (
-        pathOrUrl.substring(pathOrUrl.lastIndexOf(".") + 1, pathOrUrl.length) ||
-        pathOrUrl
-    );
+    return pathOrUrl.substring(pathOrUrl.lastIndexOf(".") + 1, pathOrUrl.length) || pathOrUrl;
 }
 
 export function loadSimulariumFile(file: Blob): Promise<ISimulariumFile> {
@@ -88,15 +79,10 @@ export const nullCachedFrame = (): CachedFrame => {
     };
 };
 
-export const getAgentDataFromBuffer = (
-    view: Float32Array,
-    offset: number
-): AgentData => {
+export const getAgentDataFromBuffer = (view: Float32Array, offset: number): AgentData => {
     // Check if the buffer has enough data for the AGENT_OBJECT_KEYS
     if (offset + AGENT_OBJECT_KEYS.length > view.length) {
-        throw new FrontEndError(
-            "Invalid offset: Not enough data in the buffer for agent data."
-        );
+        throw new FrontEndError("Invalid offset: Not enough data in the buffer for agent data.");
     }
     const agentData: AgentData = nullAgent();
     for (let i = 0; i < AGENT_OBJECT_KEYS.length; i++) {
@@ -109,23 +95,15 @@ export const getAgentDataFromBuffer = (
     const subpointsEnd = subpointsStart + nSubPoints;
 
     if (subpointsEnd > view.length) {
-        throw new FrontEndError(
-            "Invalid offset: Not enough data in the buffer for subpoints."
-        );
+        throw new FrontEndError("Invalid offset: Not enough data in the buffer for subpoints.");
     }
     agentData.subpoints = Array.from(
-        view.subarray(
-            offset + AGENT_OBJECT_KEYS.length,
-            offset + AGENT_OBJECT_KEYS.length + nSubPoints
-        )
+        view.subarray(offset + AGENT_OBJECT_KEYS.length, offset + AGENT_OBJECT_KEYS.length + nSubPoints)
     );
     return agentData;
 };
 
-export const getNextAgentOffset = (
-    view: Float32Array,
-    currentOffset: number
-): number => {
+export const getNextAgentOffset = (view: Float32Array, currentOffset: number): number => {
     const nSubPoints = view[currentOffset + AGENT_OBJECT_KEYS.length - 1];
     return currentOffset + AGENT_OBJECT_KEYS.length + nSubPoints;
 };
diff --git a/src/viewport/index.tsx b/src/viewport/index.tsx
index e8c99a97..44967022 100644
--- a/src/viewport/index.tsx
+++ b/src/viewport/index.tsx
@@ -6,12 +6,7 @@ import { faSyncAlt } from "@fortawesome/free-solid-svg-icons";
 import { forOwn, isEqual } from "lodash";
 
 import SimulariumController from "../controller";
-import {
-    TrajectoryFileInfo,
-    SelectionInterface,
-    SelectionStateInfo,
-    UIDisplayData,
-} from "../simularium";
+import { TrajectoryFileInfo, SelectionInterface, SelectionStateInfo, UIDisplayData } from "../simularium";
 import { AgentData, TrajectoryFileInfoAny } from "../simularium/types";
 import { updateTrajectoryFileInfoFormat } from "../simularium/versionHandlers";
 import { FrontEndError, ErrorLevel } from "../simularium/FrontEndError";
@@ -32,9 +27,7 @@ type ViewportProps = {
     onTimeChange: (timeData: TimeData) => void | undefined;
     simulariumController: SimulariumController;
     onJsonDataArrived(any): void;
-    onTrajectoryFileInfoChanged: (
-        cachedData: TrajectoryFileInfo
-    ) => void | undefined;
+    onTrajectoryFileInfoChanged: (cachedData: TrajectoryFileInfo) => void | undefined;
     onUIDisplayDataChanged: (data: UIDisplayData) => void | undefined;
     loadInitialData: boolean;
     hideAllAgents: boolean;
@@ -62,11 +55,10 @@ const defaultProps = {
     lockedCamera: false,
     disableCache: false,
     agentColors: [
-        0x6ac1e5, 0xff2200, 0xee7967, 0xff6600, 0xd94d49, 0xffaa00, 0xffcc00,
-        0x00ccff, 0x00aaff, 0x8048f3, 0x07f4ec, 0x79bd8f, 0x8800ff, 0xaa00ff,
-        0xcc00ff, 0xff00cc, 0xff00aa, 0xff0088, 0xff0066, 0xff0044, 0xff0022,
-        0xff0000, 0xccff00, 0xaaff00, 0x88ff00, 0x00ffcc, 0x66ff00, 0x44ff00,
-        0x22ff00, 0x00ffaa, 0x00ff88, 0x00ffaa, 0x00ffff, 0x0066ff,
+        0x6ac1e5, 0xff2200, 0xee7967, 0xff6600, 0xd94d49, 0xffaa00, 0xffcc00, 0x00ccff, 0x00aaff, 0x8048f3, 0x07f4ec,
+        0x79bd8f, 0x8800ff, 0xaa00ff, 0xcc00ff, 0xff00cc, 0xff00aa, 0xff0088, 0xff0066, 0xff0044, 0xff0022, 0xff0000,
+        0xccff00, 0xaaff00, 0x88ff00, 0x00ffcc, 0x66ff00, 0x44ff00, 0x22ff00, 0x00ffaa, 0x00ff88, 0x00ffaa, 0x00ffff,
+        0x0066ff,
     ] as string[] | number[],
 };
 
@@ -93,10 +85,7 @@ const MAX_CLICK_TIME = 300;
 // for float errors
 const CLICK_TOLERANCE = 1e-4;
 
-class Viewport extends React.Component<
-    ViewportProps & DefaultProps,
-    ViewportState
-> {
+class Viewport extends React.Component<ViewportProps & DefaultProps, ViewportState> {
     private visGeometry: VisGeometry;
     private selectionInterface: SelectionInterface;
     private recorder: FrameRecorder | null;
@@ -119,8 +108,7 @@ class Viewport extends React.Component<
     public constructor(props: ViewportProps & DefaultProps) {
         super(props);
 
-        const loggerLevel =
-            props.loggerLevel === "debug" ? jsLogger.DEBUG : jsLogger.OFF;
+        const loggerLevel = props.loggerLevel === "debug" ? jsLogger.DEBUG : jsLogger.OFF;
 
         this.animate = this.animate.bind(this);
         this.dispatchUpdatedTime = this.dispatchUpdatedTime.bind(this);
@@ -174,36 +162,24 @@ class Viewport extends React.Component<
     }
 
     private onTrajectoryFileInfo(msg: TrajectoryFileInfoAny): void {
-        const {
-            simulariumController,
-            onTrajectoryFileInfoChanged,
-            onUIDisplayDataChanged,
-            onError,
-            agentColors,
-        } = this.props;
+        const { simulariumController, onTrajectoryFileInfoChanged, onUIDisplayDataChanged, onError, agentColors } =
+            this.props;
         // Update TrajectoryFileInfo format to latest version
-        const trajectoryFileInfo: TrajectoryFileInfo =
-            updateTrajectoryFileInfoFormat(msg, onError);
+        const trajectoryFileInfo: TrajectoryFileInfo = updateTrajectoryFileInfoFormat(msg, onError);
 
-        simulariumController.visData.timeStepSize =
-            trajectoryFileInfo.timeStepSize;
+        simulariumController.visData.timeStepSize = trajectoryFileInfo.timeStepSize;
 
         const bx = trajectoryFileInfo.size.x;
         const by = trajectoryFileInfo.size.y;
         const bz = trajectoryFileInfo.size.z;
         const epsilon = 0.000001;
-        if (
-            Math.abs(bx) < epsilon ||
-            Math.abs(by) < epsilon ||
-            Math.abs(bz) < epsilon
-        ) {
+        if (Math.abs(bx) < epsilon || Math.abs(by) < epsilon || Math.abs(bz) < epsilon) {
             this.visGeometry.resetBounds();
         } else {
             this.visGeometry.resetBounds([bx, by, bz]);
         }
         // this can only happen right after resetBounds
-        simulariumController.tickIntervalLength =
-            this.visGeometry.tickIntervalLength;
+        simulariumController.tickIntervalLength = this.visGeometry.tickIntervalLength;
 
         this.visGeometry.handleCameraData(trajectoryFileInfo.cameraDefault);
         this.visGeometry.handleAgentGeometry(trajectoryFileInfo.typeMapping);
@@ -213,12 +189,7 @@ class Viewport extends React.Component<
         } catch (e) {
             if (onError) {
                 const error = e as Error;
-                onError(
-                    new FrontEndError(
-                        `error parsing 'typeMapping' data, ${error.message}`,
-                        ErrorLevel.ERROR
-                    )
-                );
+                onError(new FrontEndError(`error parsing 'typeMapping' data, ${error.message}`, ErrorLevel.ERROR));
             } else {
                 console.log("error parsing 'typeMapping' data", e);
             }
@@ -240,13 +211,7 @@ class Viewport extends React.Component<
     }
 
     public componentDidMount(): void {
-        const {
-            backgroundColor,
-            simulariumController,
-            loadInitialData,
-            onError,
-            lockedCamera,
-        } = this.props;
+        const { backgroundColor, simulariumController, loadInitialData, onError, lockedCamera } = this.props;
         this.visGeometry.setCanvasOnTheDom(this.vdomRef.current, lockedCamera);
         if (backgroundColor !== undefined) {
             this.visGeometry.setBackgroundColor(backgroundColor);
@@ -263,9 +228,7 @@ class Viewport extends React.Component<
         }
 
         simulariumController.visGeometry = this.visGeometry;
-        simulariumController.trajFileInfoCallback = (
-            msg: TrajectoryFileInfoAny
-        ) => {
+        simulariumController.trajFileInfoCallback = (msg: TrajectoryFileInfoAny) => {
             this.onTrajectoryFileInfo(msg);
         };
 
@@ -278,11 +241,7 @@ class Viewport extends React.Component<
         simulariumController.stopRecording = this.stopRecording.bind(this);
 
         if (this.vdomRef.current) {
-            this.vdomRef.current.addEventListener(
-                "timeChange",
-                this.handleTimeChange,
-                false
-            );
+            this.vdomRef.current.addEventListener("timeChange", this.handleTimeChange, false);
         }
         this.addEventHandlersToCanvas();
 
@@ -294,19 +253,13 @@ class Viewport extends React.Component<
         this.visGeometry.destroyGui();
 
         if (this.vdomRef.current) {
-            this.vdomRef.current.removeEventListener(
-                "timeChange",
-                this.handleTimeChange
-            );
+            this.vdomRef.current.removeEventListener("timeChange", this.handleTimeChange);
         }
         this.removeEventHandlersFromCanvas();
         this.stopAnimate();
     }
 
-    public componentDidUpdate(
-        prevProps: ViewportProps,
-        prevState: ViewportState
-    ): void {
+    public componentDidUpdate(prevProps: ViewportProps, prevState: ViewportState): void {
         const {
             backgroundColor,
             agentColors,
@@ -322,33 +275,16 @@ class Viewport extends React.Component<
         } = this.props;
 
         if (selectionStateInfo) {
-            if (
-                !isEqual(
-                    selectionStateInfo.highlightedAgents,
-                    prevProps.selectionStateInfo.highlightedAgents
-                )
-            ) {
-                const highlightedIds =
-                    this.selectionInterface.getHighlightedIds(
-                        selectionStateInfo
-                    );
+            if (!isEqual(selectionStateInfo.highlightedAgents, prevProps.selectionStateInfo.highlightedAgents)) {
+                const highlightedIds = this.selectionInterface.getHighlightedIds(selectionStateInfo);
                 this.visGeometry.setHighlightByIds(highlightedIds);
             }
-            if (
-                !isEqual(
-                    selectionStateInfo.hiddenAgents,
-                    prevProps.selectionStateInfo.hiddenAgents
-                )
-            ) {
-                const hiddenIds =
-                    this.selectionInterface.getHiddenIds(selectionStateInfo);
+            if (!isEqual(selectionStateInfo.hiddenAgents, prevProps.selectionStateInfo.hiddenAgents)) {
+                const hiddenIds = this.selectionInterface.getHiddenIds(selectionStateInfo);
                 this.visGeometry.setVisibleByIds(hiddenIds);
             }
             if (
-                !isEqual(
-                    selectionStateInfo.appliedColors,
-                    prevProps.selectionStateInfo.appliedColors
-                ) &&
+                !isEqual(selectionStateInfo.appliedColors, prevProps.selectionStateInfo.appliedColors) &&
                 selectionStateInfo.appliedColors.length > 0
             ) {
                 this.changeAgentsColor(selectionStateInfo.appliedColors);
@@ -512,10 +448,7 @@ class Viewport extends React.Component<
         if (!this.vdomRef.current) {
             return;
         }
-        const intersectedObject = this.visGeometry.hitTest(
-            event.offsetX,
-            event.offsetY
-        );
+        const intersectedObject = this.visGeometry.hitTest(event.offsetX, event.offsetY);
         if (intersectedObject !== NO_AGENT) {
             if (!this.props.lockedCamera) {
                 this.vdomRef.current.style.cursor = "pointer";
@@ -527,22 +460,14 @@ class Viewport extends React.Component<
 
     public addEventHandlersToCanvas(): void {
         forOwn(this.handlers, (handler, eventName) =>
-            this.visGeometry.renderDom.addEventListener(
-                eventName,
-                handler,
-                false
-            )
+            this.visGeometry.renderDom.addEventListener(eventName, handler, false)
         );
         document.addEventListener("keydown", this.handleKeyDown, false);
     }
 
     public removeEventHandlersFromCanvas(): void {
         forOwn(this.handlers, (handler, eventName) =>
-            this.visGeometry.renderDom.removeEventListener(
-                eventName,
-                handler,
-                false
-            )
+            this.visGeometry.renderDom.removeEventListener(eventName, handler, false)
         );
         document.removeEventListener("keydown", this.handleKeyDown, false);
     }
@@ -556,10 +481,7 @@ class Viewport extends React.Component<
         const intersectedObject = this.visGeometry.hitTest(posX, posY);
         if (intersectedObject !== NO_AGENT) {
             this.hit = true;
-            if (
-                oldFollowObject !== intersectedObject &&
-                oldFollowObject !== NO_AGENT
-            ) {
+            if (oldFollowObject !== intersectedObject && oldFollowObject !== NO_AGENT) {
                 this.visGeometry.removePathForAgent(oldFollowObject);
             }
             if (!this.props.lockedCamera) {
@@ -603,15 +525,12 @@ class Viewport extends React.Component<
     public changeAgentsColor(appliedColors: UIDisplayData): void {
         const changes: ColorAssignment[] = [];
         appliedColors.forEach((agent) => {
-            const agentIds = this.selectionInterface.getAgentIdsByNamesAndTags([
-                { name: agent.name, tags: [] },
-            ]);
+            const agentIds = this.selectionInterface.getAgentIdsByNamesAndTags([{ name: agent.name, tags: [] }]);
             changes.push({ agentIds, color: agent.color });
             agent.displayStates.forEach((state) => {
-                const stateIds =
-                    this.selectionInterface.getAgentIdsByNamesAndTags([
-                        { name: agent.name, tags: [state.name] },
-                    ]);
+                const stateIds = this.selectionInterface.getAgentIdsByNamesAndTags([
+                    { name: agent.name, tags: [state.name] },
+                ]);
                 changes.push({ agentIds: stateIds, color: state.color });
             });
         });
@@ -676,26 +595,13 @@ class Viewport extends React.Component<
         const { simulariumController } = this.props;
         return (
             <div className="view-controls">
-                <button
-                    onClick={simulariumController.resetCamera}
-                    className="btn"
-                >
-                    <FontAwesomeIcon
-                        icon={faSyncAlt}
-                        transform="flip-h"
-                        style={{ color: "#737373" }}
-                    />
+                <button onClick={simulariumController.resetCamera} className="btn">
+                    <FontAwesomeIcon icon={faSyncAlt} transform="flip-h" style={{ color: "#737373" }} />
                 </button>
-                <button
-                    onClick={simulariumController.centerCamera}
-                    className="btn-work"
-                >
+                <button onClick={simulariumController.centerCamera} className="btn-work">
                     Re-center
                 </button>
-                <button
-                    onClick={simulariumController.reOrientCamera}
-                    className="btn-word"
-                >
+                <button onClick={simulariumController.reOrientCamera} className="btn-word">
                     Starting orientation
                 </button>
             </div>
diff --git a/src/visGeometry/ColorHandler.ts b/src/visGeometry/ColorHandler.ts
index 5964cf52..e18b8a54 100644
--- a/src/visGeometry/ColorHandler.ts
+++ b/src/visGeometry/ColorHandler.ts
@@ -46,12 +46,9 @@ class ColorHandler {
         const colorsData = new Float32Array(numberOfColors * 4);
         for (let i = 0; i < numberOfColors; i += 1) {
             // each color is currently a hex value:
-            colorsData[i * 4 + 0] =
-                ((colorNumbers[i] & 0x00ff0000) >> 16) / 255.0;
-            colorsData[i * 4 + 1] =
-                ((colorNumbers[i] & 0x0000ff00) >> 8) / 255.0;
-            colorsData[i * 4 + 2] =
-                ((colorNumbers[i] & 0x000000ff) >> 0) / 255.0;
+            colorsData[i * 4 + 0] = ((colorNumbers[i] & 0x00ff0000) >> 16) / 255.0;
+            colorsData[i * 4 + 1] = ((colorNumbers[i] & 0x0000ff00) >> 8) / 255.0;
+            colorsData[i * 4 + 2] = ((colorNumbers[i] & 0x000000ff) >> 0) / 255.0;
             colorsData[i * 4 + 3] = 1.0;
         }
         return colorsData;
diff --git a/src/visGeometry/GeometryStore.ts b/src/visGeometry/GeometryStore.ts
index b3c16292..8d4265dc 100644
--- a/src/visGeometry/GeometryStore.ts
+++ b/src/visGeometry/GeometryStore.ts
@@ -1,13 +1,7 @@
 import { forEach } from "lodash";
 import { OBJLoader } from "three/examples/jsm/loaders/OBJLoader";
 import jsLogger, { ILogger, ILogLevel } from "js-logger";
-import {
-    BufferGeometry,
-    Object3D,
-    Mesh,
-    SphereGeometry,
-    BoxGeometry,
-} from "three";
+import { BufferGeometry, Object3D, Mesh, SphereGeometry, BoxGeometry } from "three";
 
 import { checkAndSanitizePath, getFileExtension } from "../util";
 import PDBModel from "./PDBModel";
@@ -15,13 +9,7 @@ import { InstancedMesh, InstanceType } from "./rendering/InstancedMesh";
 import TaskQueue from "../simularium/TaskQueue";
 import { AgentTypeVisData } from "../simularium/types";
 
-import {
-    AgentGeometry,
-    GeometryDisplayType,
-    GeometryStoreLoadResponse,
-    MeshGeometry,
-    MeshLoadRequest,
-} from "./types";
+import { AgentGeometry, GeometryDisplayType, GeometryStoreLoadResponse, MeshGeometry, MeshLoadRequest } from "./types";
 import { MetaballMesh } from "./rendering/MetaballMesh";
 
 export const DEFAULT_MESH_NAME = "SPHERE";
@@ -49,26 +37,16 @@ class GeometryStore {
     private _cachedAssets: Map<string, string>;
     private _registry: Registry;
     public mlogger: ILogger;
-    public static sphereGeometry: SphereGeometry = new SphereGeometry(
-        1,
-        32,
-        32
-    );
+    public static sphereGeometry: SphereGeometry = new SphereGeometry(1, 32, 32);
     public static cubeGeometry: BoxGeometry = new BoxGeometry(1, 1, 1);
 
-    private static shouldLoadPrimitive = (
-        displayType: GeometryDisplayType,
-        url?: string
-    ) => {
+    private static shouldLoadPrimitive = (displayType: GeometryDisplayType, url?: string) => {
         if (!url) {
             // if there isn't an url to load, even if they selected PDB or OBJ
             // we have to default to a sphere. May change depending on how we handle the gizmo
             return true;
         }
-        if (
-            displayType === GeometryDisplayType.PDB ||
-            displayType === GeometryDisplayType.OBJ
-        ) {
+        if (displayType === GeometryDisplayType.PDB || displayType === GeometryDisplayType.OBJ) {
             return false;
         }
         return true;
@@ -84,12 +62,7 @@ class GeometryStore {
             geometry: {
                 mesh: new Mesh(GeometryStore.sphereGeometry),
                 cancelled: false,
-                instances: new InstancedMesh(
-                    InstanceType.MESH,
-                    GeometryStore.sphereGeometry,
-                    DEFAULT_MESH_NAME,
-                    1
-                ),
+                instances: new InstancedMesh(InstanceType.MESH, GeometryStore.sphereGeometry, DEFAULT_MESH_NAME, 1),
             },
         });
         if (loggerLevel) {
@@ -105,12 +78,7 @@ class GeometryStore {
             geometry: {
                 mesh: new Mesh(GeometryStore.sphereGeometry),
                 cancelled: false,
-                instances: new InstancedMesh(
-                    InstanceType.MESH,
-                    GeometryStore.sphereGeometry,
-                    DEFAULT_MESH_NAME,
-                    1
-                ),
+                instances: new InstancedMesh(InstanceType.MESH, GeometryStore.sphereGeometry, DEFAULT_MESH_NAME, 1),
             },
         });
     }
@@ -173,12 +141,7 @@ class GeometryStore {
         return {
             mesh: new Mesh(GeometryStore.sphereGeometry),
             cancelled: false,
-            instances: new InstancedMesh(
-                InstanceType.MESH,
-                GeometryStore.sphereGeometry,
-                meshName,
-                1
-            ),
+            instances: new InstancedMesh(InstanceType.MESH, GeometryStore.sphereGeometry, meshName, 1),
         };
     }
 
@@ -186,20 +149,11 @@ class GeometryStore {
         return {
             mesh: new Mesh(GeometryStore.cubeGeometry),
             cancelled: false,
-            instances: new InstancedMesh(
-                InstanceType.MESH,
-                GeometryStore.cubeGeometry,
-                meshName,
-                1
-            ),
+            instances: new InstancedMesh(InstanceType.MESH, GeometryStore.cubeGeometry, meshName, 1),
         };
     }
 
-    private setGeometryInRegistry(
-        key: string,
-        geometry,
-        displayType: GeometryDisplayType
-    ) {
+    private setGeometryInRegistry(key: string, geometry, displayType: GeometryDisplayType) {
         this._registry.set(key, {
             geometry,
             displayType,
@@ -233,17 +187,13 @@ class GeometryStore {
                     return fetch(actualUrl).then((response) => {
                         if (!response.ok) {
                             // error will be caught by the function that calls this
-                            throw new Error(
-                                `Failed to fetch ${pdbModel.filePath} from ${actualUrl}`
-                            );
+                            throw new Error(`Failed to fetch ${pdbModel.filePath} from ${actualUrl}`);
                         }
                         return response.text();
                     });
                 } else {
                     // error will be caught by function that calls this
-                    throw new Error(
-                        `Failed to fetch ${pdbModel.filePath} from ${url}`
-                    );
+                    throw new Error(`Failed to fetch ${pdbModel.filePath} from ${url}`);
                 }
             })
             .then((data) => {
@@ -260,9 +210,7 @@ class GeometryStore {
                     // This seems like some kind of terrible error if we get here.
                     // Alternatively, we could try re-adding the registry entry.
                     // Or reject.
-                    this.mlogger.warn(
-                        `After download, GeometryStore PDB entry not found for ${url}`
-                    );
+                    this.mlogger.warn(`After download, GeometryStore PDB entry not found for ${url}`);
                     return Promise.resolve(undefined);
                 }
             });
@@ -285,35 +233,22 @@ class GeometryStore {
                 // there is already a mesh registered but we are going to load a new one.
                 // start by resetting this entry to a sphere. we will replace when the new mesh arrives
                 meshRequest.mesh = new Mesh(GeometryStore.sphereGeometry);
-                meshRequest.instances.replaceGeometry(
-                    GeometryStore.sphereGeometry,
-                    meshName
-                );
+                meshRequest.instances.replaceGeometry(GeometryStore.sphereGeometry, meshName);
             }
         } else {
             // if this mesh is not yet registered, then start off as a sphere
             // we will replace the sphere in here with the real geometry when it arrives.
-            this.setGeometryInRegistry(
-                meshName,
-                this.createNewSphereGeometry(meshName),
-                GeometryDisplayType.SPHERE
-            );
+            this.setGeometryInRegistry(meshName, this.createNewSphereGeometry(meshName), GeometryDisplayType.SPHERE);
         }
     }
 
-    private handleObjResponse(
-        meshName: string,
-        object: Object3D
-    ): MeshLoadRequest | undefined {
+    private handleObjResponse(meshName: string, object: Object3D): MeshLoadRequest | undefined {
         const item = this._registry.get(meshName);
         if (!item) {
             return; // should be unreachable, but needed for TypeScript
         }
         const meshLoadRequest = item.geometry as MeshLoadRequest;
-        if (
-            (meshLoadRequest && meshLoadRequest.cancelled) ||
-            !meshLoadRequest
-        ) {
+        if ((meshLoadRequest && meshLoadRequest.cancelled) || !meshLoadRequest) {
             this._registry.delete(meshName);
             return;
         }
@@ -334,9 +269,7 @@ class GeometryStore {
             meshLoadRequest.mesh = object;
             meshLoadRequest.instances.replaceGeometry(geom, meshName);
         } else {
-            console.error(
-                "Mesh loaded but could not find instanceable geometry in it"
-            );
+            console.error("Mesh loaded but could not find instanceable geometry in it");
         }
         if (!object.name) {
             object.name = meshName;
@@ -353,10 +286,7 @@ class GeometryStore {
                 objLoader.load(
                     url,
                     (object: Object3D) => {
-                        const meshLoadRequest = this.handleObjResponse(
-                            url,
-                            object
-                        );
+                        const meshLoadRequest = this.handleObjResponse(url, object);
                         if (meshLoadRequest) {
                             resolve(meshLoadRequest);
                         } else {
@@ -364,11 +294,7 @@ class GeometryStore {
                         }
                     },
                     (xhr) => {
-                        this.mlogger.info(
-                            url,
-                            " ",
-                            `${(xhr.loaded / xhr.total) * 100}% loaded`
-                        );
+                        this.mlogger.info(url, " ", `${(xhr.loaded / xhr.total) * 100}% loaded`);
                     },
                     (error) => {
                         // if the request fails, leave agent as a sphere by default
@@ -425,10 +351,7 @@ class GeometryStore {
                 );
             }
             return Promise.resolve(geometry);
-        } else if (
-            !this._registry.has(urlOrPath) &&
-            !this._geoLoadAttempted.get(urlOrPath)
-        ) {
+        } else if (!this._registry.has(urlOrPath) && !this._geoLoadAttempted.get(urlOrPath)) {
             this._geoLoadAttempted.set(urlOrPath, true);
             switch (displayType) {
                 case GeometryDisplayType.PDB:
@@ -482,19 +405,11 @@ class GeometryStore {
                 this.setGeometryInRegistry(lookupKey, geometry, displayType);
             } else if (displayType === GeometryDisplayType.CUBE) {
                 geometry = this.createNewCubeGeometry(lookupKey);
-                this.setGeometryInRegistry(
-                    lookupKey,
-                    geometry,
-                    GeometryDisplayType.CUBE
-                );
+                this.setGeometryInRegistry(lookupKey, geometry, GeometryDisplayType.CUBE);
             } else {
                 // default to a sphere
                 geometry = this.createNewSphereGeometry(lookupKey);
-                this.setGeometryInRegistry(
-                    lookupKey,
-                    geometry,
-                    GeometryDisplayType.SPHERE
-                );
+                this.setGeometryInRegistry(lookupKey, geometry, GeometryDisplayType.SPHERE);
             }
             return Promise.resolve({ geometry });
         } else {
@@ -512,11 +427,7 @@ class GeometryStore {
                     // if anything goes wrong, add a new sphere to the registry
                     // using this same lookup key
                     const geometry = this.createNewSphereGeometry(lookupKey);
-                    this.setGeometryInRegistry(
-                        lookupKey,
-                        geometry,
-                        GeometryDisplayType.SPHERE
-                    );
+                    this.setGeometryInRegistry(lookupKey, geometry, GeometryDisplayType.SPHERE);
                     return Promise.resolve({
                         geometry,
                         displayType: GeometryDisplayType.SPHERE,
diff --git a/src/visGeometry/PDBModel.ts b/src/visGeometry/PDBModel.ts
index b65f160f..5cce50af 100644
--- a/src/visGeometry/PDBModel.ts
+++ b/src/visGeometry/PDBModel.ts
@@ -2,13 +2,7 @@ import "regenerator-runtime/runtime";
 
 import * as Comlink from "comlink";
 import parsePdb from "parse-pdb";
-import {
-    Box3,
-    BufferGeometry,
-    Float32BufferAttribute,
-    Points,
-    Vector3,
-} from "three";
+import { Box3, BufferGeometry, Float32BufferAttribute, Points, Vector3 } from "three";
 
 import type { KMeansWorkerType } from "./workers/KMeansWorker";
 import { getObject } from "./cifparser";
@@ -111,9 +105,7 @@ class PDBModel {
             this.parseCIFData(data);
         } else {
             // Error will be caught by the Geometry store handling
-            throw new Error(
-                `Expected .cif or .pdb file extension to parse PDB data, but got ${fileExtension}`
-            );
+            throw new Error(`Expected .cif or .pdb file extension to parse PDB data, but got ${fileExtension}`);
         }
     }
 
@@ -126,9 +118,7 @@ class PDBModel {
         const parsedpdb: Record<string, unknown> = getObject(data);
         for (const obj in parsedpdb) {
             const mypdb = parsedpdb[obj];
-            const atomSites = (mypdb as Record<string, unknown>)[
-                "_atom_site"
-            ] as AtomSite[];
+            const atomSites = (mypdb as Record<string, unknown>)["_atom_site"] as AtomSite[];
             if (atomSites.length > 0) {
                 this.pdb = {
                     atoms: [] as PDBAtom[],
@@ -145,9 +135,7 @@ class PDBModel {
                     });
                 }
                 this.fixupCoordinates();
-                console.log(
-                    `PDB ${this.name} has ${this.pdb.atoms.length} atoms`
-                );
+                console.log(`PDB ${this.name} has ${this.pdb.atoms.length} atoms`);
                 this.checkChains();
                 return this.initializeLOD();
             }
@@ -222,10 +210,7 @@ class PDBModel {
             miny = Math.min(miny, this.pdb.atoms[i].y);
             minz = Math.min(minz, this.pdb.atoms[i].z);
         }
-        this.bounds = new Box3(
-            new Vector3(minx, miny, minz),
-            new Vector3(maxx, maxy, maxz)
-        );
+        this.bounds = new Box3(new Vector3(minx, miny, minz), new Vector3(maxx, maxy, maxz));
     }
 
     private checkChains(): void {
@@ -261,10 +246,7 @@ class PDBModel {
             vertices[j * 4 + 2] = coordinates[j * 3 + 2];
             vertices[j * 4 + 3] = 1;
         }
-        geometry.setAttribute(
-            "position",
-            new Float32BufferAttribute(vertices, 4)
-        );
+        geometry.setAttribute("position", new Float32BufferAttribute(vertices, 4));
         return geometry;
     }
 
@@ -314,12 +296,7 @@ class PDBModel {
         this.lods.push({
             geometry: geometry0,
             vertices: lod0,
-            instances: new InstancedMesh(
-                InstanceType.POINTS,
-                geometry0,
-                this.name + "_LOD0",
-                0
-            ),
+            instances: new InstancedMesh(InstanceType.POINTS, geometry0, this.name + "_LOD0", 0),
         });
         // start at 1, and add the rest
         for (let i = 1; i < this.lodSizes.length; ++i) {
@@ -328,21 +305,14 @@ class PDBModel {
             this.lods.push({
                 geometry: geometry,
                 vertices: lodData,
-                instances: new InstancedMesh(
-                    InstanceType.POINTS,
-                    geometry,
-                    this.name + "_LOD" + i,
-                    0
-                ),
+                instances: new InstancedMesh(InstanceType.POINTS, geometry, this.name + "_LOD" + i, 0),
             });
         }
     }
 
     public async generateLOD(): Promise<void> {
         if (!this.pdb || this.lods.length < 4) {
-            console.log(
-                "generateLOD called with no pdb data or uninitialized LODs"
-            );
+            console.log("generateLOD called with no pdb data or uninitialized LODs");
             return Promise.resolve();
         }
 
@@ -354,8 +324,8 @@ class PDBModel {
         const sizes: number[] = this.lodSizes.slice(1);
 
         // Enqueue this LOD calculation
-        const retData: Float32Array[] = await TaskQueue.enqueue<Float32Array[]>(
-            () => this.processPdbLod(n, sizes, allData)
+        const retData: Float32Array[] = await TaskQueue.enqueue<Float32Array[]>(() =>
+            this.processPdbLod(n, sizes, allData)
         );
         // ... continue on when it's done
 
@@ -370,12 +340,7 @@ class PDBModel {
             this.lods[lodIndex] = {
                 geometry: geometry,
                 vertices: retData[i],
-                instances: new InstancedMesh(
-                    InstanceType.POINTS,
-                    geometry,
-                    this.name + "_LOD" + lodIndex,
-                    0
-                ),
+                instances: new InstancedMesh(InstanceType.POINTS, geometry, this.name + "_LOD" + lodIndex, 0),
             };
         }
     }
@@ -415,18 +380,11 @@ class PDBModel {
 
     private async processPdbLod(n, sizes, allData) {
         // https://webpack.js.org/guides/web-workers/#syntax
-        const worker = new Worker(
-            new URL("./workers/KMeansWorker", import.meta.url),
-            { type: "module" }
-        );
+        const worker = new Worker(new URL("./workers/KMeansWorker", import.meta.url), { type: "module" });
         const kMeansWorkerClass = Comlink.wrap<KMeansWorkerType>(worker);
         const workerobj = await new kMeansWorkerClass();
 
-        const retData = await workerobj.run(
-            n,
-            sizes,
-            Comlink.transfer(allData, [allData.buffer])
-        );
+        const retData = await workerobj.run(n, sizes, Comlink.transfer(allData, [allData.buffer]));
 
         worker.terminate();
         return retData;
diff --git a/src/visGeometry/VisAgent.ts b/src/visGeometry/VisAgent.ts
index efe0aac0..0908191a 100644
--- a/src/visGeometry/VisAgent.ts
+++ b/src/visGeometry/VisAgent.ts
@@ -121,9 +121,7 @@ export default class VisAgent {
             material.uniformsNeedUpdate = true;
         }
         if (material.uniforms.instanceId) {
-            material.uniforms.instanceId.value = Number(
-                this.agentData.instanceId
-            );
+            material.uniforms.instanceId.value = Number(this.agentData.instanceId);
             material.uniformsNeedUpdate = true;
         }
         if (material.uniforms.radius) {
@@ -141,15 +139,11 @@ export default class VisAgent {
         const numSubPoints = subpoints.length;
         const numPoints = numSubPoints / 3;
         if (numSubPoints % 3 !== 0) {
-            console.warn(
-                "Warning, subpoints array does not contain a multiple of 3"
-            );
+            console.warn("Warning, subpoints array does not contain a multiple of 3");
             return;
         }
         if (numPoints < 2) {
-            console.warn(
-                "Warning, subpoints array does not have enough points for a curve"
-            );
+            console.warn("Warning, subpoints array does not have enough points for a curve");
             return;
         }
         // put all the subpoints into a Vector3[]
@@ -166,15 +160,8 @@ export default class VisAgent {
     }
 
     public getFollowPosition(): Vector3 {
-        const pos = new Vector3(
-            this.agentData.x,
-            this.agentData.y,
-            this.agentData.z
-        );
-        if (
-            this.agentData.visType === VisTypes.ID_VIS_TYPE_FIBER &&
-            this.fiberCurve
-        ) {
+        const pos = new Vector3(this.agentData.x, this.agentData.y, this.agentData.z);
+        if (this.agentData.visType === VisTypes.ID_VIS_TYPE_FIBER && this.fiberCurve) {
             return this.fiberCurve.getPoint(0.5).add(pos);
         } else {
             return pos;
diff --git a/src/visGeometry/agentPath.ts b/src/visGeometry/agentPath.ts
index bc09834a..12e68778 100644
--- a/src/visGeometry/agentPath.ts
+++ b/src/visGeometry/agentPath.ts
@@ -1,10 +1,4 @@
-import {
-    Color,
-    BufferAttribute,
-    BufferGeometry,
-    LineBasicMaterial,
-    LineSegments,
-} from "three";
+import { Color, BufferAttribute, BufferGeometry, LineBasicMaterial, LineSegments } from "three";
 
 const MAX_PATH_LENGTH = 32;
 
@@ -26,10 +20,7 @@ export default class LinePath {
         const pointsArray = new Float32Array(maxSegments * 3 * 2);
         const colorsArray = new Float32Array(maxSegments * 3 * 2);
         const lineGeometry = new BufferGeometry();
-        lineGeometry.setAttribute(
-            "position",
-            new BufferAttribute(pointsArray, 3)
-        );
+        lineGeometry.setAttribute("position", new BufferAttribute(pointsArray, 3));
         lineGeometry.setAttribute("color", new BufferAttribute(colorsArray, 3));
         // path starts empty: draw range spans nothing
         lineGeometry.setDrawRange(0, 0);
diff --git a/src/visGeometry/cifparser.ts b/src/visGeometry/cifparser.ts
index 160ab470..4794adfd 100644
--- a/src/visGeometry/cifparser.ts
+++ b/src/visGeometry/cifparser.ts
@@ -18,10 +18,7 @@ function getObject(str: string): Record<string, unknown> {
     for (let index = 0; index < fileArray.length; index++) {
         if (fileArray[index].startsWith(";") && semicolon === false) {
             semicolon = true;
-            fileArray[index] = fileArray[index].substring(
-                1,
-                fileArray[index].length
-            );
+            fileArray[index] = fileArray[index].substring(1, fileArray[index].length);
             sentence = sentence + fileArray[index];
             fileArray[index] = "";
         } else if (fileArray[index].startsWith(";") && semicolon === true) {
@@ -75,11 +72,7 @@ function getObject(str: string): Record<string, unknown> {
                 dataname = line.split(".")[0];
                 precArray = [];
                 precArray.push(line);
-            } else if (
-                dataname !== "" &&
-                dataname !== line.split(".")[0] &&
-                line.startsWith("_")
-            ) {
+            } else if (dataname !== "" && dataname !== line.split(".")[0] && line.startsWith("_")) {
                 //NEW DATANAME NO LOOP
 
                 dataname = line.split(".")[0];
@@ -151,35 +144,23 @@ function elaborate(dataArray, isLoop) {
 
                         controlChar = "'";
                         pushed = false;
-                    } else if (
-                        controlChar === " " &&
-                        line.charAt(index) === '"'
-                    ) {
+                    } else if (controlChar === " " && line.charAt(index) === '"') {
                         // OpEN "
 
                         controlChar = '"';
                         pushed = false;
-                    } else if (
-                        controlChar === " " &&
-                        line.charAt(index) === " "
-                    ) {
+                    } else if (controlChar === " " && line.charAt(index) === " ") {
                         if (field.trim() !== "") valueArray.push(field);
                         field = "";
                         pushed = true;
-                    } else if (
-                        controlChar === "'" &&
-                        line.charAt(index) === "'"
-                    ) {
+                    } else if (controlChar === "'" && line.charAt(index) === "'") {
                         // CLOSE '
 
                         valueArray.push(field);
                         field = "";
                         controlChar = " ";
                         pushed = true;
-                    } else if (
-                        controlChar === '"' &&
-                        line.charAt(index) === '"'
-                    ) {
+                    } else if (controlChar === '"' && line.charAt(index) === '"') {
                         // CLOSE "
 
                         valueArray.push(field);
diff --git a/src/visGeometry/index.ts b/src/visGeometry/index.ts
index 32d7579d..f382e715 100644
--- a/src/visGeometry/index.ts
+++ b/src/visGeometry/index.ts
@@ -38,12 +38,7 @@ import PDBModel from "./PDBModel";
 import AgentPath from "./agentPath";
 import { FrontEndError, ErrorLevel } from "../simularium/FrontEndError";
 
-import {
-    DEFAULT_CAMERA_Z_POSITION,
-    DEFAULT_CAMERA_SPEC,
-    nullAgent,
-    AGENT_HEADER_SIZE,
-} from "../constants";
+import { DEFAULT_CAMERA_Z_POSITION, DEFAULT_CAMERA_SPEC, nullAgent, AGENT_HEADER_SIZE } from "../constants";
 import {
     AgentData,
     AgentDisplayDataWithGeometry,
@@ -67,12 +62,7 @@ import {
     MeshLoadRequest,
     PDBGeometry,
 } from "./types";
-import {
-    checkAndSanitizePath,
-    getAgentDataFromBuffer,
-    getNextAgentOffset,
-    nullCachedFrame,
-} from "../util";
+import { checkAndSanitizePath, getAgentDataFromBuffer, getNextAgentOffset, nullCachedFrame } from "../util";
 import ColorHandler from "./ColorHandler";
 
 const MAX_PATH_LEN = 32;
@@ -246,12 +236,7 @@ class VisGeometry {
 
         this.cameraDefault = cloneDeep(DEFAULT_CAMERA_SPEC);
         const aspect = CANVAS_INITIAL_WIDTH / CANVAS_INITIAL_HEIGHT;
-        this.perspectiveCamera = new PerspectiveCamera(
-            75,
-            aspect,
-            CAMERA_INITIAL_ZNEAR,
-            CAMERA_INITIAL_ZFAR
-        );
+        this.perspectiveCamera = new PerspectiveCamera(75, aspect, CAMERA_INITIAL_ZNEAR, CAMERA_INITIAL_ZFAR);
         this.orthographicCamera = new OrthographicCamera();
         this.orthographicCamera.near = CAMERA_INITIAL_ZNEAR;
         this.orthographicCamera.far = CAMERA_INITIAL_ZFAR;
@@ -280,16 +265,12 @@ class VisGeometry {
         this.onError = onError;
     }
 
-    public setBackgroundColor(
-        c: string | number | [number, number, number] | undefined
-    ): void {
+    public setBackgroundColor(c: string | number | [number, number, number] | undefined): void {
         if (c === undefined) {
             this.backgroundColor = DEFAULT_BACKGROUND_COLOR.clone();
         } else {
             // convert from a PropColor to a THREE.Color
-            this.backgroundColor = Array.isArray(c)
-                ? new Color(c[0], c[1], c[2])
-                : new Color(c);
+            this.backgroundColor = Array.isArray(c) ? new Color(c[0], c[1], c[2]) : new Color(c);
         }
         this.pathEndColor = this.backgroundColor.clone();
         this.renderer.setBackgroundColor(this.backgroundColor);
@@ -303,9 +284,7 @@ class VisGeometry {
      */
     private getDefaultOrbitRadius(): number {
         const { position, lookAtPosition } = this.cameraDefault;
-        const radius = coordsToVector(position).distanceTo(
-            coordsToVector(lookAtPosition)
-        );
+        const radius = coordsToVector(position).distanceTo(coordsToVector(lookAtPosition));
 
         if (this.cameraDefault.orthographic) {
             return radius / this.cameraDefault.zoom;
@@ -353,8 +332,7 @@ class VisGeometry {
         spec.lookAtPosition = this.controls.target.clone();
         spec.fovDegrees = this.perspectiveCamera.fov;
 
-        spec.orthographic = !!(this.camera as OrthographicCamera)
-            .isOrthographicCamera;
+        spec.orthographic = !!(this.camera as OrthographicCamera).isOrthographicCamera;
         if (spec.orthographic) {
             spec.zoom = this.orthographicCamera.zoom;
         }
@@ -442,16 +420,11 @@ class VisGeometry {
         };
 
         this.gui.addInput(settings, "bgcolor").on("change", (event) => {
-            this.setBackgroundColor([
-                event.value.r / 255.0,
-                event.value.g / 255.0,
-                event.value.b / 255.0,
-            ]);
+            this.setBackgroundColor([event.value.r / 255.0, event.value.g / 255.0, event.value.b / 255.0]);
         });
         this.gui.addButton({ title: "Capture Frame" }).on("click", () => {
             this.render(0);
-            const dataUrl =
-                this.threejsrenderer.domElement.toDataURL("image/png");
+            const dataUrl = this.threejsrenderer.domElement.toDataURL("image/png");
             const anchor = document.createElement("a");
             anchor.href = dataUrl;
             anchor.download = "screenshot.png";
@@ -460,12 +433,10 @@ class VisGeometry {
         });
         this.gui.addSeparator();
         const lodFolder = this.gui.addFolder({ title: "LoD", expanded: false });
-        lodFolder
-            .addInput(settings, "lodBias", { min: 0, max: 4, step: 1 })
-            .on("change", (event) => {
-                this.lodBias = event.value;
-                this.updateScene(this.currentSceneData);
-            });
+        lodFolder.addInput(settings, "lodBias", { min: 0, max: 4, step: 1 }).on("change", (event) => {
+            this.lodBias = event.value;
+            this.updateScene(this.currentSceneData);
+        });
         lodFolder.addInput(settings, "lod0").on("change", (event) => {
             this.lodDistanceStops[0] = event.value;
             this.updateScene(this.currentSceneData);
@@ -491,10 +462,7 @@ class VisGeometry {
 
     public setRenderStyle(renderStyle: RenderStyle): void {
         // if target render style is supported, then change, otherwise don't.
-        if (
-            renderStyle === RenderStyle.WEBGL2_PREFERRED &&
-            !this.supportsWebGL2Rendering
-        ) {
+        if (renderStyle === RenderStyle.WEBGL2_PREFERRED && !this.supportsWebGL2Rendering) {
             this.logger.warn("Warning: WebGL2 rendering not supported");
             return;
         }
@@ -536,9 +504,7 @@ class VisGeometry {
             this.updateOrthographicFrustum();
             this.updateControlsZoomBounds();
         } else {
-            this.logger.info(
-                "Using default camera settings since none were provided"
-            );
+            this.logger.info("Using default camera settings since none were provided");
             this.cameraDefault = cloneDeep(DEFAULT_CAMERA_SPEC);
         }
         this.resetCamera();
@@ -553,8 +519,7 @@ class VisGeometry {
 
     // Sets camera position and orientation to the trajectory's initial (default) values
     public resetCameraPosition(): void {
-        const { position, upVector, lookAtPosition, fovDegrees } =
-            this.cameraDefault;
+        const { position, upVector, lookAtPosition, fovDegrees } = this.cameraDefault;
 
         // Reset camera position
         this.camera.position.set(position.x, position.y, position.z);
@@ -611,12 +576,8 @@ class VisGeometry {
                 return;
             }
 
-            const newPosition = new Vector3()
-                .subVectors(position, target)
-                .setLength(newDistance);
-            this.camera.position.copy(
-                new Vector3().addVectors(newPosition, target)
-            );
+            const newPosition = new Vector3().subVectors(position, target).setLength(newDistance);
+            this.camera.position.copy(new Vector3().addVectors(newPosition, target));
         }
 
         this.controls.update();
@@ -717,9 +678,7 @@ class VisGeometry {
     }
 
     private getAllTypeIdsForGeometryName(name: string) {
-        return [...this.visGeomMap.entries()]
-            .filter(({ 1: v }) => v === name)
-            .map(([k]) => k);
+        return [...this.visGeomMap.entries()].filter(({ 1: v }) => v === name).map(([k]) => k);
     }
 
     public onNewRuntimeGeometryType(
@@ -742,11 +701,7 @@ class VisGeometry {
         for (let i = 0; i < MAX_MESHES && i < nMeshes; i += 1) {
             const visAgent = this.visAgents[i];
             if (typeIds.includes(visAgent.agentData.type)) {
-                visAgent.setColor(
-                    this.colorHandler.getColorInfoForAgentType(
-                        visAgent.agentData.type
-                    )
-                );
+                visAgent.setColor(this.colorHandler.getColorInfoForAgentType(visAgent.agentData.type));
             }
         }
 
@@ -754,10 +709,7 @@ class VisGeometry {
     }
 
     private setupControls(disableControls: boolean): void {
-        this.controls = new OrbitControls(
-            this.camera,
-            this.threejsrenderer.domElement
-        );
+        this.controls = new OrbitControls(this.camera, this.threejsrenderer.domElement);
         this.controls.addEventListener("change", () => {
             if (this.gui) {
                 this.gui.refresh();
@@ -773,10 +725,8 @@ class VisGeometry {
             this.disableControls();
         }
         if (!disableControls) {
-            this.threejsrenderer.domElement.onmouseenter = () =>
-                this.enableControls();
-            this.threejsrenderer.domElement.onmouseleave = () =>
-                this.disableControls();
+            this.threejsrenderer.domElement.onmouseenter = () => this.enableControls();
+            this.threejsrenderer.domElement.onmouseleave = () => this.disableControls();
         }
     }
 
@@ -865,20 +815,14 @@ class VisGeometry {
         // set this up after the renderStyle has been set.
         this.constructInstancedFibers();
 
-        this.threejsrenderer.setSize(
-            CANVAS_INITIAL_WIDTH,
-            CANVAS_INITIAL_HEIGHT
-        ); // expected to change when reparented
+        this.threejsrenderer.setSize(CANVAS_INITIAL_WIDTH, CANVAS_INITIAL_HEIGHT); // expected to change when reparented
         this.threejsrenderer.setClearColor(this.backgroundColor, 1);
         this.threejsrenderer.clear();
 
         return this.threejsrenderer;
     }
 
-    public setCanvasOnTheDom(
-        parent: HTMLElement | null,
-        disableControls: boolean
-    ): void {
+    public setCanvasOnTheDom(parent: HTMLElement | null, disableControls: boolean): void {
         if (parent === undefined || parent == null) {
             return;
         }
@@ -890,18 +834,12 @@ class VisGeometry {
         parent["data-has-simularium-viewer-canvas"] = true;
         this.setupControls(disableControls);
 
-        this.resize(
-            Number(parent.dataset.width),
-            Number(parent.dataset.height)
-        );
+        this.resize(Number(parent.dataset.width), Number(parent.dataset.height));
 
         this.threejsrenderer.setClearColor(this.backgroundColor, 1.0);
         this.threejsrenderer.clear();
 
-        this.threejsrenderer.domElement.setAttribute(
-            "style",
-            "top: 0px; left: 0px"
-        );
+        this.threejsrenderer.domElement.setAttribute("style", "top: 0px; left: 0px");
     }
 
     public toggleControls(lockedCamera: boolean): void {
@@ -989,10 +927,7 @@ class VisGeometry {
         }
         if (this.hemiLight && this.fixLightsToCamera) {
             // make hemi light come down from vertical of screen (camera up)
-            this.hemiLight.position.setFromMatrixColumn(
-                this.camera.matrixWorld,
-                1
-            );
+            this.hemiLight.position.setFromMatrixColumn(this.camera.matrixWorld, 1);
         }
 
         // remove all children of instancedMeshGroup.  we will re-add them.
@@ -1020,9 +955,7 @@ class VisGeometry {
                     const meshEntry = entry as MeshGeometry;
                     if (meshEntry.geometry.instances.instanceCount() > 0) {
                         meshTypes.push(meshEntry.geometry.instances);
-                        this.instancedMeshGroup.add(
-                            meshEntry.geometry.instances.getMesh()
-                        );
+                        this.instancedMeshGroup.add(meshEntry.geometry.instances.getMesh());
                     }
                 } else {
                     const pdbEntry = entry as PDBGeometry;
@@ -1036,32 +969,18 @@ class VisGeometry {
                 }
             }
 
-            this.renderer.setMeshGroups(
-                this.instancedMeshGroup,
-                this.fibers,
-                meshTypes
-            );
+            this.renderer.setMeshGroups(this.instancedMeshGroup, this.fibers, meshTypes);
             this.renderer.setFollowedInstance(this.followObjectId);
             //get bounding box max dim
             const v = new Vector3();
             this.boundingBox.getSize(v);
             const maxDim = Math.max(v.x, v.y, v.z);
             // this.camera.zoom accounts for perspective vs ortho cameras
-            this.renderer.setNearFar(
-                this.boxNearZ,
-                this.boxFarZ,
-                maxDim,
-                this.camera.zoom
-            );
+            this.renderer.setNearFar(this.boxNearZ, this.boxFarZ, maxDim, this.camera.zoom);
             this.boundingBoxMesh.visible = false;
             this.tickMarksMesh.visible = false;
             this.agentPathGroup.visible = false;
-            this.renderer.render(
-                this.threejsrenderer,
-                this.scene,
-                this.camera,
-                null
-            );
+            this.renderer.render(this.threejsrenderer, this.scene, this.camera, null);
 
             // final pass, add extra stuff on top: bounding box and line paths
             this.boundingBoxMesh.visible = true;
@@ -1094,48 +1013,30 @@ class VisGeometry {
         const size = new Vector2();
         this.threejsrenderer.getSize(size);
         if (this.renderStyle === RenderStyle.WEBGL1_FALLBACK) {
-            const mouse = new Vector2(
-                (offsetX / size.x) * 2 - 1,
-                -(offsetY / size.y) * 2 + 1
-            );
+            const mouse = new Vector2((offsetX / size.x) * 2 - 1, -(offsetY / size.y) * 2 + 1);
             return this.legacyRenderer.hitTest(mouse, this.camera);
         } else {
             // read from instance buffer pixel!
-            return this.renderer.hitTest(
-                this.threejsrenderer,
-                offsetX,
-                size.y - offsetY
-            );
+            return this.renderer.hitTest(this.threejsrenderer, offsetX, size.y - offsetY);
         }
     }
 
     private setAgentColors(): void {
         this.visAgents.forEach((agent) => {
-            agent.setColor(
-                this.colorHandler.getColorInfoForAgentType(agent.agentData.type)
-            );
+            agent.setColor(this.colorHandler.getColorInfoForAgentType(agent.agentData.type));
         });
     }
 
     public createMaterials(colors: (number | string)[]): void {
         const newColorData = this.colorHandler.updateColorArray(colors);
-        this.renderer.updateColors(
-            newColorData.numberOfColors,
-            newColorData.colorArray
-        );
+        this.renderer.updateColors(newColorData.numberOfColors, newColorData.colorArray);
         this.setAgentColors();
     }
 
     public applyColorToAgents(colorAssignments: ColorAssignment[]): void {
         colorAssignments.forEach((color) => {
-            const newColorData = this.colorHandler.setColorForAgentTypes(
-                color.agentIds,
-                color.color
-            );
-            this.renderer.updateColors(
-                newColorData.numberOfColors,
-                newColorData.colorArray
-            );
+            const newColorData = this.colorHandler.setColorForAgentTypes(color.agentIds, color.color);
+            this.renderer.updateColors(newColorData.numberOfColors, newColorData.colorArray);
         });
         this.updateScene(this.currentSceneData);
     }
@@ -1183,42 +1084,22 @@ class VisGeometry {
                         return;
                     }
                     // will only have a returned displayType if it changed.
-                    const {
-                        displayType: returnedDisplayType,
-                        geometry,
-                        errorMessage,
-                    } = newGeometryLoaded;
+                    const { displayType: returnedDisplayType, geometry, errorMessage } = newGeometryLoaded;
                     const newDisplayType = returnedDisplayType || displayType;
-                    this.onNewRuntimeGeometryType(
-                        lookupKey,
-                        newDisplayType,
-                        geometry
-                    );
+                    this.onNewRuntimeGeometryType(lookupKey, newDisplayType, geometry);
                     // handle additional async update to LOD for pdbs
-                    if (
-                        newDisplayType === GeometryDisplayType.PDB &&
-                        geometry
-                    ) {
+                    if (newDisplayType === GeometryDisplayType.PDB && geometry) {
                         const pdbModel = geometry as PDBModel;
                         return pdbModel.generateLOD().then(() => {
-                            this.logger.info(
-                                "Finished loading pdb LODs: ",
-                                lookupKey
-                            );
-                            this.onNewRuntimeGeometryType(
-                                lookupKey,
-                                newDisplayType,
-                                geometry
-                            );
+                            this.logger.info("Finished loading pdb LODs: ", lookupKey);
+                            this.onNewRuntimeGeometryType(lookupKey, newDisplayType, geometry);
                         });
                     }
                     // if returned with a resolve, but has an error message,
                     // the error was handled, and the geometry was replaced with a sphere
                     // but still good to tell the user about it.
                     if (errorMessage) {
-                        this.onError(
-                            new FrontEndError(errorMessage, ErrorLevel.WARNING)
-                        );
+                        this.onError(new FrontEndError(errorMessage, ErrorLevel.WARNING));
                         this.logger.info(errorMessage);
                     }
                 })
@@ -1236,10 +1117,7 @@ class VisGeometry {
         this.tickIntervalLength = tickIntervalLength;
     }
 
-    public createTickMarks(
-        volumeDimensions: number[],
-        boundsAsTuple: Bounds
-    ): void {
+    public createTickMarks(volumeDimensions: number[], boundsAsTuple: Bounds): void {
         const [minX, minY, minZ, maxX, maxY, maxZ] = boundsAsTuple;
         const visible = this.tickMarksMesh ? this.tickMarksMesh.visible : true;
 
@@ -1376,44 +1254,26 @@ class VisGeometry {
 
     public createBoundingBox(boundsAsTuple: Bounds): void {
         const [minX, minY, minZ, maxX, maxY, maxZ] = boundsAsTuple;
-        const visible = this.boundingBoxMesh
-            ? this.boundingBoxMesh.visible
-            : true;
-        this.boundingBox = new Box3(
-            new Vector3(minX, minY, minZ),
-            new Vector3(maxX, maxY, maxZ)
-        );
-        this.boundingBoxMesh = new Box3Helper(
-            this.boundingBox,
-            BOUNDING_BOX_COLOR
-        );
+        const visible = this.boundingBoxMesh ? this.boundingBoxMesh.visible : true;
+        this.boundingBox = new Box3(new Vector3(minX, minY, minZ), new Vector3(maxX, maxY, maxZ));
+        this.boundingBoxMesh = new Box3Helper(this.boundingBox, BOUNDING_BOX_COLOR);
         this.boundingBoxMesh.visible = visible;
     }
 
     public resetBounds(volumeDimensions?: number[]): void {
         this.scene.remove(this.boundingBoxMesh, this.tickMarksMesh);
         if (!volumeDimensions) {
-            this.logger.warn(
-                `Invalid volume dimensions received: ${volumeDimensions}; using defaults.`
-            );
+            this.logger.warn(`Invalid volume dimensions received: ${volumeDimensions}; using defaults.`);
             volumeDimensions = DEFAULT_VOLUME_DIMENSIONS;
         }
         const [bx, by, bz] = volumeDimensions;
-        const boundsAsTuple: Bounds = [
-            -bx / 2,
-            -by / 2,
-            -bz / 2,
-            bx / 2,
-            by / 2,
-            bz / 2,
-        ];
+        const boundsAsTuple: Bounds = [-bx / 2, -by / 2, -bz / 2, bx / 2, by / 2, bz / 2];
         this.createBoundingBox(boundsAsTuple);
         this.createTickMarks(volumeDimensions, boundsAsTuple);
         this.scene.add(this.boundingBoxMesh, this.tickMarksMesh);
 
         if (this.controls) {
-            this.controls.maxDistance =
-                this.boundingBox.max.distanceTo(this.boundingBox.min) * 1.414;
+            this.controls.maxDistance = this.boundingBox.max.distanceTo(this.boundingBox.min) * 1.414;
         }
     }
 
@@ -1441,11 +1301,7 @@ class VisGeometry {
         return agent;
     }
 
-    private addPdbToDrawList(
-        typeId: number,
-        visAgent: VisAgent,
-        pdbEntry: PDBModel
-    ) {
+    private addPdbToDrawList(typeId: number, visAgent: VisAgent, pdbEntry: PDBModel) {
         if (this.renderStyle === RenderStyle.WEBGL1_FALLBACK) {
             this.legacyRenderer.addPdb(
                 pdbEntry,
@@ -1464,19 +1320,12 @@ class VisGeometry {
         }
     }
 
-    private addMeshToDrawList(
-        typeId: number,
-        visAgent: VisAgent,
-        meshEntry: MeshLoadRequest,
-        agentData: AgentData
-    ) {
+    private addMeshToDrawList(typeId: number, visAgent: VisAgent, meshEntry: MeshLoadRequest, agentData: AgentData) {
         const radius = agentData.cr ? agentData.cr : 1;
         const scale = this.getScaleForId(typeId);
         const meshGeom = meshEntry.mesh;
         if (!meshGeom) {
-            console.warn(
-                "MeshEntry is present but mesh unavailable. Not rendering agent."
-            );
+            console.warn("MeshEntry is present but mesh unavailable. Not rendering agent.");
         }
         if (this.renderStyle === RenderStyle.WEBGL1_FALLBACK) {
             this.legacyRenderer.addMesh(
@@ -1504,11 +1353,7 @@ class VisGeometry {
         }
     }
 
-    private addFiberToDrawList(
-        typeId: number,
-        visAgent: VisAgent,
-        agentData: AgentData
-    ) {
+    private addFiberToDrawList(typeId: number, visAgent: VisAgent, agentData: AgentData) {
         visAgent.updateFiber(agentData.subpoints);
         const scale = this.getScaleForId(typeId);
 
@@ -1609,9 +1454,7 @@ class VisGeometry {
             // update the agent!
             visAgent.agentData = agentData;
 
-            const isHighlighted = this.highlightedIds.includes(
-                visAgent.agentData.type
-            );
+            const isHighlighted = this.highlightedIds.includes(visAgent.agentData.type);
             visAgent.setHighlighted(isHighlighted);
 
             const isHidden = this.hiddenIds.includes(visAgent.agentData.type);
@@ -1621,16 +1464,12 @@ class VisGeometry {
                 continue;
             }
 
-            visAgent.setColor(
-                this.colorHandler.getColorInfoForAgentType(typeId)
-            );
+            visAgent.setColor(this.colorHandler.getColorInfoForAgentType(typeId));
             // if not fiber...
             if (visType === VisTypes.ID_VIS_TYPE_DEFAULT) {
                 const response = this.getGeoForAgentType(typeId);
                 if (!response) {
-                    this.logger.warn(
-                        `No mesh nor pdb available for ${typeId}? Should be unreachable code`
-                    );
+                    this.logger.warn(`No mesh nor pdb available for ${typeId}? Should be unreachable code`);
                     offset = getNextAgentOffset(view, offset);
                     continue;
                 }
@@ -1640,12 +1479,7 @@ class VisGeometry {
                     this.addPdbToDrawList(typeId, visAgent, pdbEntry);
                 } else {
                     const meshEntry = geometry as MeshLoadRequest;
-                    this.addMeshToDrawList(
-                        typeId,
-                        visAgent,
-                        meshEntry,
-                        agentData
-                    );
+                    this.addMeshToDrawList(typeId, visAgent, meshEntry, agentData);
                 }
 
                 dx = agentData.x - lastx;
@@ -1653,15 +1487,7 @@ class VisGeometry {
                 dz = agentData.z - lastz;
 
                 if (path) {
-                    this.addPointToPath(
-                        path,
-                        agentData.x,
-                        agentData.y,
-                        agentData.z,
-                        dx,
-                        dy,
-                        dz
-                    );
+                    this.addPointToPath(path, agentData.x, agentData.y, agentData.z, dx, dy, dz);
                 }
             } else if (visType === VisTypes.ID_VIS_TYPE_FIBER) {
                 this.addFiberToDrawList(typeId, visAgent, agentData);
@@ -1692,16 +1518,11 @@ class VisGeometry {
         const rotationBuffer = 0.01;
         if (this.followObjectId !== NO_AGENT && this.focusMode) {
             // keep camera at same distance from target.
-            const direction = new Vector3().subVectors(
-                this.camera.position,
-                this.controls.target
-            );
+            const direction = new Vector3().subVectors(this.camera.position, this.controls.target);
             const distance = direction.length();
             direction.normalize();
 
-            const followedObject = this.visAgentInstances.get(
-                this.followObjectId
-            );
+            const followedObject = this.visAgentInstances.get(this.followObjectId);
             if (!followedObject) {
                 return;
             }
@@ -1716,10 +1537,7 @@ class VisGeometry {
 
             // update new camera position
             const newPosition = new Vector3();
-            newPosition.subVectors(
-                newTarget,
-                direction.multiplyScalar(-distance)
-            );
+            newPosition.subVectors(newTarget, direction.multiplyScalar(-distance));
             if (lerpPosition) {
                 this.camera.position.lerp(newPosition, lerpRate);
             } else {
@@ -1727,9 +1545,7 @@ class VisGeometry {
             }
         } else if (this.needToCenterCamera) {
             this.controls.target.lerp(new Vector3(), lerpRate);
-            if (
-                this.controls.target.distanceTo(new Vector3()) < distanceBuffer
-            ) {
+            if (this.controls.target.distanceTo(new Vector3()) < distanceBuffer) {
                 this.controls.target.copy(new Vector3());
                 this.needToCenterCamera = false;
             }
@@ -1737,23 +1553,15 @@ class VisGeometry {
             this.controls.target.copy(new Vector3());
             const { position } = this.camera;
             const curDistanceFromCenter = this.rotateDistance;
-            const targetPosition = this.initCameraPosition
-                .clone()
-                .setLength(curDistanceFromCenter);
+            const targetPosition = this.initCameraPosition.clone().setLength(curDistanceFromCenter);
             const currentPosition = position.clone();
 
-            const targetQuat = new Quaternion().setFromAxisAngle(
-                targetPosition,
-                0
-            );
+            const targetQuat = new Quaternion().setFromAxisAngle(targetPosition, 0);
             const currentQuat = new Quaternion().copy(this.camera.quaternion);
             const totalAngle = currentQuat.angleTo(targetQuat);
 
             const newAngle = lerpRate * totalAngle; // gives same value as using quanternion.slerp
-            const normal = currentPosition
-                .clone()
-                .cross(targetPosition)
-                .normalize();
+            const normal = currentPosition.clone().cross(targetPosition).normalize();
 
             this.camera.position.applyAxisAngle(normal, newAngle);
             this.camera.lookAt(new Vector3());
@@ -1774,11 +1582,7 @@ class VisGeometry {
     }
 
     // assumes color is a threejs color, or null/undefined
-    public addPathForAgent(
-        id: number,
-        maxSegments?: number,
-        color?: Color
-    ): AgentPath {
+    public addPathForAgent(id: number, maxSegments?: number, color?: Color): AgentPath {
         // make sure the idx is not already in our list.
         // could be optimized...
         const foundpath = this.findPathForAgent(id);
@@ -1809,11 +1613,7 @@ class VisGeometry {
 
     public removePathForAgent(id: number): void {
         if (!this.agentPaths.delete(id)) {
-            this.logger.warn(
-                "attempted to remove path for agent " +
-                    id +
-                    " that doesn't exist."
-            );
+            this.logger.warn("attempted to remove path for agent " + id + " that doesn't exist.");
         }
     }
 
@@ -1821,15 +1621,7 @@ class VisGeometry {
         this.agentPaths.clear();
     }
 
-    public addPointToPath(
-        path: AgentPath,
-        x: number,
-        y: number,
-        z: number,
-        dx: number,
-        dy: number,
-        dz: number
-    ): void {
+    public addPointToPath(path: AgentPath, x: number, y: number, z: number, dx: number, dy: number, dz: number): void {
         if (x === dx && y === dy && z === dz) {
             return;
         }
@@ -1838,11 +1630,7 @@ class VisGeometry {
         // assume it jumped the boundary going the other way.
         const volumeSize = new Vector3();
         this.boundingBox.getSize(volumeSize);
-        if (
-            Math.abs(dx) > volumeSize.x / 2 ||
-            Math.abs(dy) > volumeSize.y / 2 ||
-            Math.abs(dz) > volumeSize.z / 2
-        ) {
+        if (Math.abs(dx) > volumeSize.x / 2 || Math.abs(dy) > volumeSize.y / 2 || Math.abs(dz) > volumeSize.z / 2) {
             // now what?
             // TODO: clip line segment from x-dx to x against the bounds,
             // compute new line segments from x-dx to bound, and from x to opposite bound
diff --git a/src/visGeometry/rendering/CompositePass.ts b/src/visGeometry/rendering/CompositePass.ts
index 4e3d5699..c69193e0 100644
--- a/src/visGeometry/rendering/CompositePass.ts
+++ b/src/visGeometry/rendering/CompositePass.ts
@@ -25,11 +25,7 @@ class CompositePass {
                 backgroundColor: { value: new Color(1, 1, 1) },
                 bgHCLoffset: bgHCLoffset
                     ? {
-                          value: new Vector3(
-                              bgHCLoffset.x,
-                              bgHCLoffset.y,
-                              bgHCLoffset.z
-                          ),
+                          value: new Vector3(bgHCLoffset.x, bgHCLoffset.y, bgHCLoffset.z),
                       }
                     : { value: new Vector3(1.0, 0.0, 0.2) },
                 zNear: { value: 0.1 },
diff --git a/src/visGeometry/rendering/ContourPass.ts b/src/visGeometry/rendering/ContourPass.ts
index b8d46147..1b64ce7c 100644
--- a/src/visGeometry/rendering/ContourPass.ts
+++ b/src/visGeometry/rendering/ContourPass.ts
@@ -165,11 +165,7 @@ class ContourPass {
     }
 
     public setFollowColor(value: number[]): void {
-        this.pass.material.uniforms.followColor.value = new Color(
-            value[0] / 255.0,
-            value[1] / 255.0,
-            value[2] / 255.0
-        );
+        this.pass.material.uniforms.followColor.value = new Color(value[0] / 255.0, value[1] / 255.0, value[2] / 255.0);
     }
 
     public setFollowAlpha(value: number): void {
diff --git a/src/visGeometry/rendering/DrawBufferPass.ts b/src/visGeometry/rendering/DrawBufferPass.ts
index bb6c5a06..b8cb3519 100644
--- a/src/visGeometry/rendering/DrawBufferPass.ts
+++ b/src/visGeometry/rendering/DrawBufferPass.ts
@@ -42,11 +42,7 @@ class DrawBufferPass {
         this.pass.material.uniforms.bias.value = new Vector4(x, y, z, w);
     }
 
-    public render(
-        renderer: WebGLRenderer,
-        target: WebGLRenderTarget | null,
-        bufferToDraw: WebGLRenderTarget
-    ): void {
+    public render(renderer: WebGLRenderer, target: WebGLRenderTarget | null, bufferToDraw: WebGLRenderTarget): void {
         this.pass.material.uniforms.colorTex.value = bufferToDraw.texture;
 
         const c = renderer.getClearColor(new Color()).clone();
diff --git a/src/visGeometry/rendering/GBufferPass.ts b/src/visGeometry/rendering/GBufferPass.ts
index f09fefb2..208cab13 100644
--- a/src/visGeometry/rendering/GBufferPass.ts
+++ b/src/visGeometry/rendering/GBufferPass.ts
@@ -1,11 +1,6 @@
 import PDBGBufferShaders from "./PDBGBufferShaders";
 import { InstancedFiberGroup } from "./InstancedFiber";
-import {
-    MRTShaders,
-    setRenderPass,
-    updateProjectionMatrix,
-    updateResolution,
-} from "./MultipassMaterials";
+import { MRTShaders, setRenderPass, updateProjectionMatrix, updateResolution } from "./MultipassMaterials";
 
 import { GeometryInstanceContainer } from "../types";
 
@@ -78,10 +73,7 @@ class GBufferPass {
         const a = renderer.getClearAlpha();
 
         // TODO necessary??  now handled in the meshTypes loop below
-        updateProjectionMatrix(
-            this.pdbGbufferMaterials,
-            camera.projectionMatrix
-        );
+        updateProjectionMatrix(this.pdbGbufferMaterials, camera.projectionMatrix);
         this.fibers.updateProjectionMatrix(camera.projectionMatrix);
         for (let i = 0; i < this.meshTypes.length; ++i) {
             const s = this.meshTypes[i].getShaders();
@@ -111,10 +103,7 @@ class GBufferPass {
 
             this.fibers.setRenderPass();
             for (let i = 0; i < this.meshTypes.length; ++i) {
-                setRenderPass(
-                    this.meshTypes[i].getMesh() as Mesh | Points,
-                    this.meshTypes[i].getShaders()
-                );
+                setRenderPass(this.meshTypes[i].getMesh() as Mesh | Points, this.meshTypes[i].getShaders());
             }
             renderer.render(scene, camera);
             // end draw instanced things
diff --git a/src/visGeometry/rendering/GaussianBlur.ts b/src/visGeometry/rendering/GaussianBlur.ts
index 0bf2fafd..fc79b53b 100644
--- a/src/visGeometry/rendering/GaussianBlur.ts
+++ b/src/visGeometry/rendering/GaussianBlur.ts
@@ -89,10 +89,7 @@ class BlurPass1D {
         this.pass.render(renderer, tgt);
     }
 
-    private createSampleWeights(
-        kernelRadius: number,
-        stdDev: number
-    ): number[] {
+    private createSampleWeights(kernelRadius: number, stdDev: number): number[] {
         const weights: number[] = [];
 
         for (let i = 0; i <= kernelRadius; i++) {
@@ -102,10 +99,7 @@ class BlurPass1D {
         return weights;
     }
 
-    private createSampleOffsets(
-        kernelRadius: number,
-        uvIncrement: Vector2
-    ): Vector2[] {
+    private createSampleOffsets(kernelRadius: number, uvIncrement: Vector2): Vector2[] {
         const offsets: Vector2[] = [];
 
         for (let i = 0; i <= kernelRadius; i++) {
@@ -118,10 +112,11 @@ class BlurPass1D {
     public configure(kernelRadius: number, stdDev: number): void {
         if (kernelRadius !== this.radius || stdDev !== this.stdDev) {
             this.pass.material.defines["KERNEL_RADIUS"] = kernelRadius;
-            this.pass.material.uniforms["sampleUvOffsets"].value =
-                this.createSampleOffsets(kernelRadius, this.uvOffset);
-            this.pass.material.uniforms["sampleWeights"].value =
-                this.createSampleWeights(kernelRadius, stdDev);
+            this.pass.material.uniforms["sampleUvOffsets"].value = this.createSampleOffsets(
+                kernelRadius,
+                this.uvOffset
+            );
+            this.pass.material.uniforms["sampleWeights"].value = this.createSampleWeights(kernelRadius, stdDev);
             this.pass.material.needsUpdate = true;
             this.radius = kernelRadius;
             this.stdDev = stdDev;
@@ -130,10 +125,7 @@ class BlurPass1D {
 }
 
 function gaussian(x, stdDev) {
-    return (
-        Math.exp(-(x * x) / (2.0 * (stdDev * stdDev))) /
-        (Math.sqrt(2.0 * Math.PI) * stdDev)
-    );
+    return Math.exp(-(x * x) / (2.0 * (stdDev * stdDev))) / (Math.sqrt(2.0 * Math.PI) * stdDev);
 }
 
 class BlurPass {
@@ -150,11 +142,7 @@ class BlurPass {
         this.blurYpass.resize(x, y);
     }
 
-    public configure(
-        radius: number,
-        stdDev: number,
-        depthCutoff: number
-    ): void {
+    public configure(radius: number, stdDev: number, depthCutoff: number): void {
         this.blurXpass.configure(radius, stdDev);
         this.blurXpass.pass.material.uniforms.depthCutoff.value = depthCutoff;
         this.blurYpass.configure(radius, stdDev);
@@ -182,8 +170,7 @@ class BlurPass {
 
         this.blurXpass.render(renderer, intermediateBuffer);
 
-        this.blurYpass.pass.material.uniforms.colorTex.value =
-            intermediateBuffer.texture;
+        this.blurYpass.pass.material.uniforms.colorTex.value = intermediateBuffer.texture;
         this.blurYpass.pass.material.uniforms.viewPosTex.value = positions;
 
         this.blurYpass.render(renderer, target);
diff --git a/src/visGeometry/rendering/HitTestHelper.ts b/src/visGeometry/rendering/HitTestHelper.ts
index a6e99268..348b8311 100644
--- a/src/visGeometry/rendering/HitTestHelper.ts
+++ b/src/visGeometry/rendering/HitTestHelper.ts
@@ -64,12 +64,7 @@ export default class HitTestHelper {
     }
 
     // Read the x,y pixel of the given idBuffer Texture object
-    public hitTest(
-        renderer: WebGLRenderer,
-        idBuffer: Texture,
-        x: number,
-        y: number
-    ): Float32Array {
+    public hitTest(renderer: WebGLRenderer, idBuffer: Texture, x: number, y: number): Float32Array {
         // Strategy:  because multiple render targets (MRT) are being used, and ThreeJS
         // doesn't allow direct reads from them, we render a single pixel from one of
         // the textures internal to the MRT.
@@ -81,11 +76,8 @@ export default class HitTestHelper {
         // (typeId), (instanceId), fragViewPos.z, fragPosDepth;
 
         // tell the shader which texture to use, and which pixel to read from
-        (
-            this.hitTestMesh.material as ShaderMaterial
-        ).uniforms.objectIdTexture.value = idBuffer;
-        (this.hitTestMesh.material as ShaderMaterial).uniforms.pixel.value =
-            new Vector2(x, y);
+        (this.hitTestMesh.material as ShaderMaterial).uniforms.objectIdTexture.value = idBuffer;
+        (this.hitTestMesh.material as ShaderMaterial).uniforms.pixel.value = new Vector2(x, y);
 
         // "draw" the pixel into our hit test buffer
         renderer.setRenderTarget(this.hitTestBuffer);
diff --git a/src/visGeometry/rendering/InstancedFiber.ts b/src/visGeometry/rendering/InstancedFiber.ts
index a8919a40..b747e3e7 100644
--- a/src/visGeometry/rendering/InstancedFiber.ts
+++ b/src/visGeometry/rendering/InstancedFiber.ts
@@ -17,31 +17,16 @@ import {
 } from "three";
 
 import { createShaders } from "./InstancedFiberShader";
-import {
-    MRTShaders,
-    setRenderPass,
-    updateProjectionMatrix,
-} from "./MultipassMaterials";
+import { MRTShaders, setRenderPass, updateProjectionMatrix } from "./MultipassMaterials";
 
 const tmpQuaternion = new Quaternion();
 const tmpEuler = new Euler();
 
-function createTubeGeometry(
-    numSides = 8,
-    subdivisions = 50,
-    openEnded = false
-) {
+function createTubeGeometry(numSides = 8, subdivisions = 50, openEnded = false) {
     // create a base CylinderGeometry which handles UVs, end caps and faces
     const radius = 1;
     const length = 1;
-    const baseGeometry = new CylinderGeometry(
-        radius,
-        radius,
-        length,
-        numSides,
-        subdivisions,
-        openEnded
-    );
+    const baseGeometry = new CylinderGeometry(radius, radius, length, numSides, subdivisions, openEnded);
 
     // fix the orientation so X can act as arc length
     baseGeometry.rotateZ(Math.PI / 2);
@@ -62,21 +47,9 @@ function createTubeGeometry(
         const a = indices[i];
         const b = indices[i + 1];
         const c = indices[i + 2];
-        const v0 = new Vector3(
-            vertices[a * 3 + 0],
-            vertices[a * 3 + 1],
-            vertices[a * 3 + 2]
-        );
-        const v1 = new Vector3(
-            vertices[b * 3 + 0],
-            vertices[b * 3 + 1],
-            vertices[b * 3 + 2]
-        );
-        const v2 = new Vector3(
-            vertices[c * 3 + 0],
-            vertices[c * 3 + 1],
-            vertices[c * 3 + 2]
-        );
+        const v0 = new Vector3(vertices[a * 3 + 0], vertices[a * 3 + 1], vertices[a * 3 + 2]);
+        const v1 = new Vector3(vertices[b * 3 + 0], vertices[b * 3 + 1], vertices[b * 3 + 2]);
+        const v2 = new Vector3(vertices[c * 3 + 0], vertices[c * 3 + 1], vertices[c * 3 + 2]);
         const verts = [v0, v1, v2];
         const faceUvs = [
             new Vector2(faceVertexUvs[a * 2 + 0], faceVertexUvs[a * 2 + 1]),
@@ -158,18 +131,9 @@ class InstancedFiber {
 
         // make typescript happy. these will be reallocated in reallocate()
         this.curveGeometry = new BufferGeometry();
-        this.positionAttribute = new InstancedBufferAttribute(
-            Uint8Array.from([]),
-            1
-        );
-        this.rotationAttribute = new InstancedBufferAttribute(
-            Uint8Array.from([]),
-            1
-        );
-        this.instanceAttribute = new InstancedBufferAttribute(
-            Uint8Array.from([]),
-            1
-        );
+        this.positionAttribute = new InstancedBufferAttribute(Uint8Array.from([]), 1);
+        this.rotationAttribute = new InstancedBufferAttribute(Uint8Array.from([]), 1);
+        this.instanceAttribute = new InstancedBufferAttribute(Uint8Array.from([]), 1);
         this.curveData = new DataTexture(Uint8Array.from([]), 0, 0);
 
         this.mesh = new Mesh(this.instancedGeometry);
@@ -211,20 +175,10 @@ class InstancedFiber {
         // Otherwise an exception is thrown.
         const oldData = this.curveData.image.data;
         newData.set(oldData);
-        this.curveData = new DataTexture(
-            newData,
-            this.nCurvePoints,
-            n,
-            RGBAFormat,
-            FloatType
-        );
+        this.curveData = new DataTexture(newData, this.nCurvePoints, n, RGBAFormat, FloatType);
         this.curveData.needsUpdate = true;
 
-        this.curveGeometry = createTubeGeometry(
-            this.nRadialSections,
-            this.nSegments,
-            false
-        );
+        this.curveGeometry = createTubeGeometry(this.nRadialSections, this.nSegments, false);
 
         // we must create a new Geometry to have things update correctly
         this.instancedGeometry = new InstancedBufferGeometry().copy(
@@ -233,10 +187,7 @@ class InstancedFiber {
         );
         // install the new geometry into our Mesh object
         this.mesh.geometry = this.instancedGeometry;
-        this.instancedGeometry.setDrawRange(
-            0,
-            this.curveGeometry.getAttribute("position").count
-        );
+        this.instancedGeometry.setDrawRange(0, this.curveGeometry.getAttribute("position").count);
 
         this.shaderSet.mat.uniforms.curveData.value = this.curveData;
 
@@ -247,10 +198,7 @@ class InstancedFiber {
         const newPos = new Float32Array(4 * n);
         newPos.set(this.positionAttribute.array);
         this.positionAttribute = new InstancedBufferAttribute(newPos, 4, false);
-        this.instancedGeometry.setAttribute(
-            "translateAndScale",
-            this.positionAttribute
-        );
+        this.instancedGeometry.setAttribute("translateAndScale", this.positionAttribute);
 
         const newRot = new Float32Array(4 * n);
         newRot.set(this.rotationAttribute.array);
@@ -259,15 +207,8 @@ class InstancedFiber {
 
         const newInst = new Float32Array(3 * n);
         newInst.set(this.instanceAttribute.array);
-        this.instanceAttribute = new InstancedBufferAttribute(
-            newInst,
-            3,
-            false
-        );
-        this.instancedGeometry.setAttribute(
-            "instanceAndTypeId",
-            this.instanceAttribute
-        );
+        this.instanceAttribute = new InstancedBufferAttribute(newInst, 3, false);
+        this.instancedGeometry.setAttribute("instanceAndTypeId", this.instanceAttribute);
     }
 
     dispose(): void {
@@ -292,8 +233,7 @@ class InstancedFiber {
 
         if (requestedNumInstances > currentNumInstances) {
             // increase to next multiple of increment
-            const newInstanceCount =
-                (Math.trunc(requestedNumInstances / increment) + 1) * increment;
+            const newInstanceCount = (Math.trunc(requestedNumInstances / increment) + 1) * increment;
 
             this.reallocate(newInstanceCount);
         }
@@ -316,12 +256,7 @@ class InstancedFiber {
         this.positionAttribute.setXYZW(offset, x, y, z, scale);
         const q = tmpQuaternion.setFromEuler(tmpEuler.set(rx, ry, rz));
         this.rotationAttribute.setXYZW(offset, q.x, q.y, q.z, q.w);
-        this.instanceAttribute.setXYZ(
-            offset,
-            uniqueAgentId,
-            typeId,
-            this.currentInstance
-        );
+        this.instanceAttribute.setXYZ(offset, uniqueAgentId, typeId, this.currentInstance);
         const nPts = Math.min(curvePts.length / 3, this.nCurvePoints);
         for (let i = 0; i < nPts; ++i) {
             const offset = this.currentInstance * this.nCurvePoints * 4 + i * 4;
@@ -404,18 +339,7 @@ class InstancedFiberGroup {
             // create new
             this.fibers[nCurvePts] = new InstancedFiber(nCurvePts, 256);
         }
-        this.fibers[nCurvePts].addInstance(
-            curvePts,
-            x,
-            y,
-            z,
-            scale,
-            rx,
-            ry,
-            rz,
-            uniqueAgentId,
-            typeId
-        );
+        this.fibers[nCurvePts].addInstance(curvePts, x, y, z, scale, rx, ry, rz, uniqueAgentId, typeId);
     }
 
     endUpdate(): void {
diff --git a/src/visGeometry/rendering/InstancedFiberShader.ts b/src/visGeometry/rendering/InstancedFiberShader.ts
index ffe39944..f8ca5f17 100644
--- a/src/visGeometry/rendering/InstancedFiberShader.ts
+++ b/src/visGeometry/rendering/InstancedFiberShader.ts
@@ -381,10 +381,7 @@ void main()	{
 }
 `;
 
-function createShaders(
-    lengthSegments: number,
-    nPointsPerCurve: number
-): MRTShaders {
+function createShaders(lengthSegments: number, nPointsPerCurve: number): MRTShaders {
     const shaderDefines = {
         lengthSegments: lengthSegments,
         ROBUST: false,
diff --git a/src/visGeometry/rendering/InstancedMesh.ts b/src/visGeometry/rendering/InstancedMesh.ts
index 6229b655..cc8f83ea 100644
--- a/src/visGeometry/rendering/InstancedMesh.ts
+++ b/src/visGeometry/rendering/InstancedMesh.ts
@@ -36,17 +36,9 @@ class InstancedMesh implements GeometryInstanceContainer {
     private currentInstance: number;
     private isUpdating: boolean;
 
-    constructor(
-        type: InstanceType,
-        baseGeometry: BufferGeometry,
-        name: string,
-        count: number
-    ) {
+    constructor(type: InstanceType, baseGeometry: BufferGeometry, name: string, count: number) {
         this.baseGeometry = baseGeometry;
-        this.drawable =
-            type === InstanceType.MESH
-                ? new Mesh(baseGeometry)
-                : new Points(baseGeometry);
+        this.drawable = type === InstanceType.MESH ? new Mesh(baseGeometry) : new Points(baseGeometry);
         this.drawable.name = name;
 
         this.currentInstance = 0;
@@ -55,24 +47,12 @@ class InstancedMesh implements GeometryInstanceContainer {
         this.instancedGeometry = new InstancedBufferGeometry();
         this.instancedGeometry.instanceCount = 0;
 
-        this.shaderSet =
-            type === InstanceType.MESH
-                ? InstancedMeshShader.shaderSet
-                : PDBGBufferShaders.shaderSet;
+        this.shaderSet = type === InstanceType.MESH ? InstancedMeshShader.shaderSet : PDBGBufferShaders.shaderSet;
 
         // make typescript happy. these will be reallocated in reallocate()
-        this.positionAttribute = new InstancedBufferAttribute(
-            Uint8Array.from([]),
-            1
-        );
-        this.rotationAttribute = new InstancedBufferAttribute(
-            Uint8Array.from([]),
-            1
-        );
-        this.instanceAttribute = new InstancedBufferAttribute(
-            Uint8Array.from([]),
-            1
-        );
+        this.positionAttribute = new InstancedBufferAttribute(Uint8Array.from([]), 1);
+        this.rotationAttribute = new InstancedBufferAttribute(Uint8Array.from([]), 1);
+        this.instanceAttribute = new InstancedBufferAttribute(Uint8Array.from([]), 1);
 
         // because instanced, threejs needs to know not to early cull
         this.drawable.frustumCulled = false;
@@ -128,10 +108,7 @@ class InstancedMesh implements GeometryInstanceContainer {
         const newPos = new Float32Array(4 * n);
         newPos.set(this.positionAttribute.array);
         this.positionAttribute = new InstancedBufferAttribute(newPos, 4, false);
-        this.instancedGeometry.setAttribute(
-            "translateAndScale",
-            this.positionAttribute
-        );
+        this.instancedGeometry.setAttribute("translateAndScale", this.positionAttribute);
 
         const newRot = new Float32Array(4 * n);
         newRot.set(this.rotationAttribute.array);
@@ -140,15 +117,8 @@ class InstancedMesh implements GeometryInstanceContainer {
 
         const newInst = new Float32Array(3 * n);
         newInst.set(this.instanceAttribute.array);
-        this.instanceAttribute = new InstancedBufferAttribute(
-            newInst,
-            3,
-            false
-        );
-        this.instancedGeometry.setAttribute(
-            "instanceAndTypeId",
-            this.instanceAttribute
-        );
+        this.instanceAttribute = new InstancedBufferAttribute(newInst, 3, false);
+        this.instancedGeometry.setAttribute("instanceAndTypeId", this.instanceAttribute);
     }
 
     dispose(): void {
@@ -173,8 +143,7 @@ class InstancedMesh implements GeometryInstanceContainer {
 
         if (requestedNumInstances > currentNumInstances) {
             // increase to next multiple of increment
-            const newInstanceCount =
-                (Math.trunc(requestedNumInstances / increment) + 1) * increment;
+            const newInstanceCount = (Math.trunc(requestedNumInstances / increment) + 1) * increment;
 
             this.reallocate(newInstanceCount);
         }
diff --git a/src/visGeometry/rendering/KMeans3d.ts b/src/visGeometry/rendering/KMeans3d.ts
index de1b8bd1..c2ca1ebb 100644
--- a/src/visGeometry/rendering/KMeans3d.ts
+++ b/src/visGeometry/rendering/KMeans3d.ts
@@ -99,9 +99,7 @@ export default class KMeans {
 
     public dataDimensionExtents(data: Float32Array): number[] {
         //data = data || this.data;
-        const extents = [
-            1000000, 1000000, 1000000, -1000000, -1000000, -1000000,
-        ];
+        const extents = [1000000, 1000000, 1000000, -1000000, -1000000, -1000000];
 
         for (let i = 0; i < data.length / 3; i++) {
             const x = data[i * 3];
@@ -169,9 +167,7 @@ export default class KMeans {
         // choose k random items from the original data set
         const numItems = data.length / 3;
         const selected: Set<number> = new Set();
-        while (
-            selected.add(Math.floor(Math.random() * numItems) | 0).size < k
-        ) {}
+        while (selected.add(Math.floor(Math.random() * numItems) | 0).size < k) {}
         const items: number[] = [...selected];
 
         const means = new Float32Array(k * 3);
@@ -216,10 +212,7 @@ export default class KMeans {
                  * √((pi-qi)^2+...+(pn-qn)^2)
                  */
 
-                const sum =
-                    (x - mx) * (x - mx) +
-                    (y - my) * (y - my) +
-                    (z - mz) * (z - mz);
+                const sum = (x - mx) * (x - mx) + (y - my) * (y - my) + (z - mz) * (z - mz);
 
                 // √sum
                 this.tmpDistances[j] = Math.sqrt(sum);
@@ -246,11 +239,7 @@ export default class KMeans {
         let dim;
 
         // For each cluster, get sum of point coordinates in every dimension.
-        for (
-            let pointIndex = 0;
-            pointIndex < this.assignments.length;
-            pointIndex++
-        ) {
+        for (let pointIndex = 0; pointIndex < this.assignments.length; pointIndex++) {
             meanIndex = this.assignments[pointIndex];
             const px = this.data[pointIndex * 3];
             const py = this.data[pointIndex * 3 + 1];
@@ -268,23 +257,18 @@ export default class KMeans {
          */
         for (meanIndex = 0; meanIndex < sums.length / 3; meanIndex++) {
             if (0 === counts[meanIndex]) {
-                sums[meanIndex * 3] =
-                    this.extents[0] + Math.random() * this.ranges[0];
-                sums[meanIndex * 3 + 1] =
-                    this.extents[1] + Math.random() * this.ranges[1];
-                sums[meanIndex * 3 + 2] =
-                    this.extents[2] + Math.random() * this.ranges[2];
+                sums[meanIndex * 3] = this.extents[0] + Math.random() * this.ranges[0];
+                sums[meanIndex * 3 + 1] = this.extents[1] + Math.random() * this.ranges[1];
+                sums[meanIndex * 3 + 2] = this.extents[2] + Math.random() * this.ranges[2];
                 continue;
             }
 
             sums[meanIndex * 3] /= counts[meanIndex];
             sums[meanIndex * 3] = Math.round(100 * sums[meanIndex * 3]) / 100;
             sums[meanIndex * 3 + 1] /= counts[meanIndex];
-            sums[meanIndex * 3 + 1] =
-                Math.round(100 * sums[meanIndex * 3 + 1]) / 100;
+            sums[meanIndex * 3 + 1] = Math.round(100 * sums[meanIndex * 3 + 1]) / 100;
             sums[meanIndex * 3 + 2] /= counts[meanIndex];
-            sums[meanIndex * 3 + 2] =
-                Math.round(100 * sums[meanIndex * 3 + 2]) / 100;
+            sums[meanIndex * 3 + 2] = Math.round(100 * sums[meanIndex * 3 + 2]) / 100;
         }
 
         /* If current means does not equal to new means, then
@@ -298,19 +282,13 @@ export default class KMeans {
             // Nudge means 1/nth of the way toward average point.
             for (meanIndex = 0; meanIndex < sums.length / 3; meanIndex++) {
                 for (dim = 0; dim < 3; dim++) {
-                    diff =
-                        sums[meanIndex * 3 + dim] -
-                        this.means[meanIndex * 3 + dim];
+                    diff = sums[meanIndex * 3 + dim] - this.means[meanIndex * 3 + dim];
                     if (Math.abs(diff) > 0.1) {
                         const stepsPerIteration = 10;
-                        this.means[meanIndex * 3 + dim] +=
-                            diff / stepsPerIteration;
-                        this.means[meanIndex * 3 + dim] =
-                            Math.round(100 * this.means[meanIndex * 3 + dim]) /
-                            100;
+                        this.means[meanIndex * 3 + dim] += diff / stepsPerIteration;
+                        this.means[meanIndex * 3 + dim] = Math.round(100 * this.means[meanIndex * 3 + dim]) / 100;
                     } else {
-                        this.means[meanIndex * 3 + dim] =
-                            sums[meanIndex * 3 + dim];
+                        this.means[meanIndex * 3 + dim] = sums[meanIndex * 3 + dim];
                     }
                 }
             }
@@ -346,10 +324,6 @@ export default class KMeans {
             meansMoved = this.moveMeans();
 
             time = Date.now() - startTimeMs;
-        } while (
-            meansMoved &&
-            this.iterations < maxIterations &&
-            !(time > timeLimitMs)
-        );
+        } while (meansMoved && this.iterations < maxIterations && !(time > timeLimitMs));
     }
 }
diff --git a/src/visGeometry/rendering/LegacyRenderer.ts b/src/visGeometry/rendering/LegacyRenderer.ts
index b08dcb1f..fe9ee1cf 100644
--- a/src/visGeometry/rendering/LegacyRenderer.ts
+++ b/src/visGeometry/rendering/LegacyRenderer.ts
@@ -95,12 +95,7 @@ class LegacyRenderer {
         }
     }
 
-    public addMesh(
-        meshGeom: BufferGeometry,
-        visAgent: VisAgent,
-        scale: number,
-        color: Color
-    ): void {
+    public addMesh(meshGeom: BufferGeometry, visAgent: VisAgent, scale: number, color: Color): void {
         const m = new Mesh(meshGeom, this.selectMaterial(visAgent, color));
         m.position.x = visAgent.agentData.x;
         m.position.y = visAgent.agentData.y;
@@ -120,12 +115,7 @@ class LegacyRenderer {
         this.agentMeshGroup.add(m);
     }
 
-    public addPdb(
-        pdb: PDBModel,
-        visAgent: VisAgent,
-        color: Color,
-        distances: number[]
-    ): void {
+    public addPdb(pdb: PDBModel, visAgent: VisAgent, color: Color, distances: number[]): void {
         const pdbGroup = new LOD();
         const pdbObjects: Object3D[] = pdb.instantiate();
         // update pdb transforms too
@@ -164,10 +154,7 @@ class LegacyRenderer {
         const raycaster = new Raycaster();
         raycaster.setFromCamera(coords, camera);
         // intersect the agent mesh group.
-        const intersects = raycaster.intersectObjects(
-            this.agentMeshGroup.children,
-            true
-        );
+        const intersects = raycaster.intersectObjects(this.agentMeshGroup.children, true);
         intersects.sort((a, b) => a.distance - b.distance);
 
         if (intersects && intersects.length) {
diff --git a/src/visGeometry/rendering/MetaballMesh.ts b/src/visGeometry/rendering/MetaballMesh.ts
index beff9480..dc61da27 100644
--- a/src/visGeometry/rendering/MetaballMesh.ts
+++ b/src/visGeometry/rendering/MetaballMesh.ts
@@ -1,15 +1,4 @@
-import {
-    Box3,
-    BufferGeometry,
-    Camera,
-    Euler,
-    Group,
-    Quaternion,
-    Scene,
-    Vector3,
-    Vector4,
-    WebGLRenderer,
-} from "three";
+import { Box3, BufferGeometry, Camera, Euler, Group, Quaternion, Scene, Vector3, Vector4, WebGLRenderer } from "three";
 import { MarchingCubes } from "three/examples/jsm/objects/MarchingCubes";
 
 import MetaballMeshShaders from "./MetaballMeshShader";
@@ -73,14 +62,8 @@ class MetaballMesh implements GeometryInstanceContainer {
 
         const mat = this.shaderSet.mat.clone();
         mat.uniforms.translateAndScale.value = new Vector4(x, y, z, scale);
-        mat.uniforms.rotation.value = new Quaternion().setFromEuler(
-            new Euler(rx, ry, rz)
-        );
-        mat.uniforms.instanceAndTypeId.value = new Vector3(
-            uniqueAgentId,
-            typeId,
-            lodScale
-        );
+        mat.uniforms.rotation.value = new Quaternion().setFromEuler(new Euler(rx, ry, rz));
+        mat.uniforms.instanceAndTypeId.value = new Vector3(uniqueAgentId, typeId, lodScale);
 
         // what is a good value here?
         const resolution = 28;
@@ -94,13 +77,7 @@ class MetaballMesh implements GeometryInstanceContainer {
         // TODO consider this implementation instead:
         // https://github.com/sjpt/metaballsWebgl
 
-        const effect = new MarchingCubes(
-            resolution,
-            mat,
-            enableNormals,
-            enableColors,
-            maxPolyCount
-        );
+        const effect = new MarchingCubes(resolution, mat, enableNormals, enableColors, maxPolyCount);
         effect.position.set(0, 0, 0);
         effect.scale.set(1, 1, 1);
 
@@ -110,9 +87,7 @@ class MetaballMesh implements GeometryInstanceContainer {
         const bound = new Box3();
         let maxRadius = 0;
         for (let i = 0; i < subPoints.length; i += 4) {
-            bound.expandByPoint(
-                new Vector3(subPoints[i], subPoints[i + 1], subPoints[i + 2])
-            );
+            bound.expandByPoint(new Vector3(subPoints[i], subPoints[i + 1], subPoints[i + 2]));
             if (subPoints[i + 3] > maxRadius) {
                 maxRadius = subPoints[i + 3];
             }
diff --git a/src/visGeometry/rendering/MetaballMeshShader.ts b/src/visGeometry/rendering/MetaballMeshShader.ts
index 7644f8e9..53e83daa 100644
--- a/src/visGeometry/rendering/MetaballMeshShader.ts
+++ b/src/visGeometry/rendering/MetaballMeshShader.ts
@@ -1,12 +1,4 @@
-import {
-    FrontSide,
-    GLSL3,
-    Matrix3,
-    Matrix4,
-    RawShaderMaterial,
-    Vector3,
-    Vector4,
-} from "three";
+import { FrontSide, GLSL3, Matrix3, Matrix4, RawShaderMaterial, Vector3, Vector4 } from "three";
 
 import { MRTShaders } from "./MultipassMaterials";
 
diff --git a/src/visGeometry/rendering/MultipassMaterials.ts b/src/visGeometry/rendering/MultipassMaterials.ts
index f01fc14b..c8f23a38 100644
--- a/src/visGeometry/rendering/MultipassMaterials.ts
+++ b/src/visGeometry/rendering/MultipassMaterials.ts
@@ -1,12 +1,4 @@
-import {
-    Material,
-    Matrix4,
-    Mesh,
-    Points,
-    RawShaderMaterial,
-    Scene,
-    Vector2,
-} from "three";
+import { Material, Matrix4, Mesh, Points, RawShaderMaterial, Scene, Vector2 } from "three";
 
 export interface MRTShaders {
     mat: RawShaderMaterial;
@@ -23,10 +15,7 @@ export function setRenderPass(obj: Mesh | Points, shaderSet: MRTShaders): void {
     obj.material = shaderSet.mat;
 }
 
-export function setSceneRenderPass(
-    scene: Scene,
-    shaderSet: MRTShaders
-): Material {
+export function setSceneRenderPass(scene: Scene, shaderSet: MRTShaders): Material {
     scene.overrideMaterial = shaderSet.mat;
     return scene.overrideMaterial;
 }
diff --git a/src/visGeometry/rendering/RenderToBuffer.ts b/src/visGeometry/rendering/RenderToBuffer.ts
index 10922f18..c2a3d743 100644
--- a/src/visGeometry/rendering/RenderToBuffer.ts
+++ b/src/visGeometry/rendering/RenderToBuffer.ts
@@ -58,10 +58,7 @@ class RenderToBuffer {
         this.camera = new OrthographicCamera(-1, 1, 1, -1, 0, 1);
     }
 
-    public render(
-        renderer: WebGLRenderer,
-        target: WebGLRenderTarget | null
-    ): void {
+    public render(renderer: WebGLRenderer, target: WebGLRenderTarget | null): void {
         renderer.setRenderTarget(target);
         renderer.render(this.scene, this.camera);
     }
diff --git a/src/visGeometry/rendering/SSAO.ts b/src/visGeometry/rendering/SSAO.ts
index 423e842d..e70813ff 100644
--- a/src/visGeometry/rendering/SSAO.ts
+++ b/src/visGeometry/rendering/SSAO.ts
@@ -1,13 +1,6 @@
 import RenderToBuffer from "./RenderToBuffer";
 
-import {
-    Color,
-    Vector2,
-    OrthographicCamera,
-    PerspectiveCamera,
-    WebGLRenderer,
-    WebGLRenderTarget
-} from "three";
+import { Color, Vector2, OrthographicCamera, PerspectiveCamera, WebGLRenderer, WebGLRenderTarget } from "three";
 
 class SSAO1Pass {
     public pass: RenderToBuffer;
diff --git a/src/visGeometry/rendering/SimulariumRenderer.ts b/src/visGeometry/rendering/SimulariumRenderer.ts
index 788bdabf..e1106842 100644
--- a/src/visGeometry/rendering/SimulariumRenderer.ts
+++ b/src/visGeometry/rendering/SimulariumRenderer.ts
@@ -106,10 +106,7 @@ class SimulariumRenderer {
 
         this.ssao1Pass = new SSAO1Pass();
 
-        this.blur1Pass = new BlurPass(
-            this.parameters.ao1.blurRadius,
-            this.parameters.ao1.blurStdDev
-        );
+        this.blur1Pass = new BlurPass(this.parameters.ao1.blurRadius, this.parameters.ao1.blurStdDev);
 
         this.compositePass = new CompositePass({
             x: this.parameters.bghueoffset,
@@ -206,21 +203,15 @@ class SimulariumRenderer {
             max: 2.0,
         });
 
-        depth
-            .addInput(settings, "bghueoffset", { min: 0.0, max: 1.0 })
-            .on("change", (event) => {
-                this.compositePass.setBgHueOffset(event.value);
-            });
-        depth
-            .addInput(settings, "bgchromaoffset", { min: 0.0, max: 1.0 })
-            .on("change", (event) => {
-                this.compositePass.setBgChromaOffset(event.value);
-            });
-        depth
-            .addInput(settings, "bgluminanceoffset", { min: 0.0, max: 1.0 })
-            .on("change", (event) => {
-                this.compositePass.setBgLuminanceOffset(event.value);
-            });
+        depth.addInput(settings, "bghueoffset", { min: 0.0, max: 1.0 }).on("change", (event) => {
+            this.compositePass.setBgHueOffset(event.value);
+        });
+        depth.addInput(settings, "bgchromaoffset", { min: 0.0, max: 1.0 }).on("change", (event) => {
+            this.compositePass.setBgChromaOffset(event.value);
+        });
+        depth.addInput(settings, "bgluminanceoffset", { min: 0.0, max: 1.0 }).on("change", (event) => {
+            this.compositePass.setBgLuminanceOffset(event.value);
+        });
         const outlines = gui.addFolder({ title: "Outlines", expanded: false });
         outlines
             .addInput(settings, "outlineThickness", {
@@ -232,18 +223,12 @@ class SimulariumRenderer {
                 this.contourPass.setOutlineThickness(event.value);
             });
         outlines.addInput(settings, "outlineColor").on("change", (event) => {
-            this.contourPass.setOutlineColor([
-                event.value.r,
-                event.value.g,
-                event.value.b,
-            ]);
+            this.contourPass.setOutlineColor([event.value.r, event.value.g, event.value.b]);
         });
 
-        outlines
-            .addInput(settings, "outlineAlpha", { min: 0.0, max: 1.0 })
-            .on("change", (event) => {
-                this.contourPass.setOutlineAlpha(event.value);
-            });
+        outlines.addInput(settings, "outlineAlpha", { min: 0.0, max: 1.0 }).on("change", (event) => {
+            this.contourPass.setOutlineAlpha(event.value);
+        });
         outlines
             .addInput(settings, "followThickness", {
                 min: 1.0,
@@ -254,17 +239,11 @@ class SimulariumRenderer {
                 this.contourPass.setFollowOutlineThickness(event.value);
             });
         outlines.addInput(settings, "followColor").on("change", (event) => {
-            this.contourPass.setFollowColor([
-                event.value.r,
-                event.value.g,
-                event.value.b,
-            ]);
+            this.contourPass.setFollowColor([event.value.r, event.value.g, event.value.b]);
+        });
+        outlines.addInput(settings, "followAlpha", { min: 0.0, max: 1.0 }).on("change", (event) => {
+            this.contourPass.setFollowAlpha(event.value);
         });
-        outlines
-            .addInput(settings, "followAlpha", { min: 0.0, max: 1.0 })
-            .on("change", (event) => {
-                this.contourPass.setFollowAlpha(event.value);
-            });
     }
 
     public setBackgroundColor(color: Color): void {
@@ -277,12 +256,7 @@ class SimulariumRenderer {
 
     public hitTest(renderer: WebGLRenderer, x: number, y: number): number {
         const tex = this.gbuffer.texture[AGENTBUFFER];
-        const pixel = this.hitTestHelper.hitTest(
-            renderer,
-            tex,
-            x / tex.image.width,
-            y / tex.image.height
-        );
+        const pixel = this.hitTestHelper.hitTest(renderer, tex, x / tex.image.width, y / tex.image.height);
         // (typeId), (instanceId), fragViewPos.z, fragPosDepth;
 
         if (pixel[3] === -1) {
@@ -324,12 +298,7 @@ class SimulariumRenderer {
         this.drawBufferPass.resize(x, y);
     }
 
-    public setNearFar(
-        n: number,
-        f: number,
-        boxMaxDim: number,
-        cameraZoom: number
-    ): void {
+    public setNearFar(n: number, f: number, boxMaxDim: number, cameraZoom: number): void {
         this.boundsNear = n;
         this.boundsFar = f;
         this.boundsMaxDim = boxMaxDim;
@@ -346,22 +315,16 @@ class SimulariumRenderer {
         const sceneSize = this.boundsMaxDim;
 
         // update all ao settings here.
-        this.ssao1Pass.pass.material.uniforms.bias.value =
-            this.parameters.ao1.bias;
-        this.ssao1Pass.pass.material.uniforms.intensity.value =
-            this.parameters.ao1.intensity;
+        this.ssao1Pass.pass.material.uniforms.bias.value = this.parameters.ao1.bias;
+        this.ssao1Pass.pass.material.uniforms.intensity.value = this.parameters.ao1.intensity;
         this.ssao1Pass.pass.material.uniforms.scale.value =
             (this.parameters.ao1.scale * sceneSize * this.cameraZoom) / 100.0;
-        this.ssao1Pass.pass.material.uniforms.kernelRadius.value =
-            this.parameters.ao1.kernelRadius;
-        this.ssao1Pass.pass.material.uniforms.minResolution.value =
-            this.parameters.ao1.minResolution;
+        this.ssao1Pass.pass.material.uniforms.kernelRadius.value = this.parameters.ao1.kernelRadius;
+        this.ssao1Pass.pass.material.uniforms.minResolution.value = this.parameters.ao1.minResolution;
         this.ssao1Pass.pass.material.uniforms.beginFalloffDistance.value =
-            this.parameters.atomBeginDistance * sceneSize +
-            Math.max(this.boundsNear, 0.0);
+            this.parameters.atomBeginDistance * sceneSize + Math.max(this.boundsNear, 0.0);
         this.ssao1Pass.pass.material.uniforms.endFalloffDistance.value =
-            this.parameters.chainBeginDistance * sceneSize +
-            Math.max(this.boundsNear, 0.0);
+            this.parameters.chainBeginDistance * sceneSize + Math.max(this.boundsNear, 0.0);
 
         this.ssao1Pass.pass.material.uniforms.cameraFar.value = camera.far;
 
@@ -372,11 +335,9 @@ class SimulariumRenderer {
         );
 
         this.compositePass.pass.material.uniforms.atomicBeginDistance.value =
-            this.parameters.atomBeginDistance * sceneSize +
-            Math.max(this.boundsNear, 0.0);
+            this.parameters.atomBeginDistance * sceneSize + Math.max(this.boundsNear, 0.0);
         this.compositePass.pass.material.uniforms.chainBeginDistance.value =
-            this.parameters.chainBeginDistance * sceneSize +
-            Math.max(this.boundsNear, 0.0);
+            this.parameters.chainBeginDistance * sceneSize + Math.max(this.boundsNear, 0.0);
 
         // currently rendering is a draw call per PDB POINTS objects and one draw call per mesh TRIANGLES object (reusing same geometry buffer)
 
diff --git a/src/visGeometry/types.ts b/src/visGeometry/types.ts
index 3eb61f68..9811c304 100644
--- a/src/visGeometry/types.ts
+++ b/src/visGeometry/types.ts
@@ -39,10 +39,7 @@ export enum GeometryDisplayType {
     SPHERE_GROUP = "SPHERE_GROUP",
 }
 
-export type PrimitiveDisplayType =
-    | GeometryDisplayType.SPHERE
-    | GeometryDisplayType.CUBE
-    | GeometryDisplayType.GIZMO;
+export type PrimitiveDisplayType = GeometryDisplayType.SPHERE | GeometryDisplayType.CUBE | GeometryDisplayType.GIZMO;
 
 export interface PDBGeometry {
     geometry: PDBModel;
@@ -51,10 +48,7 @@ export interface PDBGeometry {
 
 export interface MeshGeometry {
     geometry: MeshLoadRequest;
-    displayType:
-        | GeometryDisplayType.SPHERE_GROUP
-        | GeometryDisplayType.OBJ
-        | PrimitiveDisplayType;
+    displayType: GeometryDisplayType.SPHERE_GROUP | GeometryDisplayType.OBJ | PrimitiveDisplayType;
 }
 
 export type AgentGeometry = PDBGeometry | MeshGeometry;
diff --git a/src/visGeometry/workers/tsconfig.json b/src/visGeometry/workers/tsconfig.json
index 8c270ea2..ab4f04ad 100644
--- a/src/visGeometry/workers/tsconfig.json
+++ b/src/visGeometry/workers/tsconfig.json
@@ -1,18 +1,18 @@
 {
     "compilerOptions": {
-      "allowJs": true,
-      "allowSyntheticDefaultImports": true,
-      "declaration": true,
-      "declarationDir": "type-declarations",
-      "downlevelIteration": true,
-      "jsx": "preserve",
-      "lib": ["WebWorker", "ES2015", "ES6", "ScriptHost", "ES2016.Array.Include"],
-      "module": "ES2020",
-      "moduleResolution": "node",
-      "noImplicitAny": false,
-      "preserveConstEnums": true,
-      "sourceMap": true,
-      "strict": true,
-      "target": "ES6",
+        "allowJs": true,
+        "allowSyntheticDefaultImports": true,
+        "declaration": true,
+        "declarationDir": "type-declarations",
+        "downlevelIteration": true,
+        "jsx": "preserve",
+        "lib": ["WebWorker", "ES2015", "ES6", "ScriptHost", "ES2016.Array.Include"],
+        "module": "ES2020",
+        "moduleResolution": "node",
+        "noImplicitAny": false,
+        "preserveConstEnums": true,
+        "sourceMap": true,
+        "strict": true,
+        "target": "ES6"
     }
 }
diff --git a/tsconfig.base.json b/tsconfig.base.json
index 2c741d66..d8b1fae6 100644
--- a/tsconfig.base.json
+++ b/tsconfig.base.json
@@ -1,21 +1,19 @@
 {
-  "compilerOptions": {
-    "allowSyntheticDefaultImports": true,
-    "declaration": true,
-    "declarationDir": "type-declarations",
-    "downlevelIteration": true,
-    "jsx": "preserve",
-    "lib": ["DOM", "ES2017", "ES6", "DOM.Iterable", "ScriptHost", "es2016.array.include"],
-    "module": "es2020",
-    "moduleResolution": "Node",
-    "noImplicitAny": false,
-    "preserveConstEnums": true,
-    "sourceMap": true,
-    "strict": true,
-    "target": "ES6",
-    "skipLibCheck": true,
-  },
-  "files": [
-    "src/index.ts"
-  ]
-}
\ No newline at end of file
+    "compilerOptions": {
+        "allowSyntheticDefaultImports": true,
+        "declaration": true,
+        "declarationDir": "type-declarations",
+        "downlevelIteration": true,
+        "jsx": "preserve",
+        "lib": ["DOM", "ES2017", "ES6", "DOM.Iterable", "ScriptHost", "es2016.array.include"],
+        "module": "es2020",
+        "moduleResolution": "Node",
+        "noImplicitAny": false,
+        "preserveConstEnums": true,
+        "sourceMap": true,
+        "strict": true,
+        "target": "ES6",
+        "skipLibCheck": true
+    },
+    "files": ["src/index.ts"]
+}
diff --git a/tsconfig.commonjs.json b/tsconfig.commonjs.json
index 5370e302..b05d5ae0 100644
--- a/tsconfig.commonjs.json
+++ b/tsconfig.commonjs.json
@@ -1,6 +1,6 @@
 {
-  "extends": "./tsconfig.base",
-  "compilerOptions": {
-    "module": "CommonJS"
-  }
-}
\ No newline at end of file
+    "extends": "./tsconfig.base",
+    "compilerOptions": {
+        "module": "CommonJS"
+    }
+}
diff --git a/tsconfig.es.json b/tsconfig.es.json
index d9195668..371bc59c 100644
--- a/tsconfig.es.json
+++ b/tsconfig.es.json
@@ -1,6 +1,6 @@
 {
-  "extends": "./tsconfig.base",
-  "compilerOptions": {
-    "module": "ES6"
-  }
-}
\ No newline at end of file
+    "extends": "./tsconfig.base",
+    "compilerOptions": {
+        "module": "ES6"
+    }
+}
diff --git a/tsconfig.json b/tsconfig.json
index 65bd44ca..a9a854b8 100644
--- a/tsconfig.json
+++ b/tsconfig.json
@@ -1,9 +1,5 @@
 {
-  "extends": "./tsconfig.base",
-  "include": [
-    "src/**/*"
-  ],
-  "exclude": [
-    "src/visGeometry/workers/**/*"
-  ]
+    "extends": "./tsconfig.base",
+    "include": ["src/**/*"],
+    "exclude": ["src/visGeometry/workers/**/*"]
 }