R.md

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# 中文总榜 > 软件类 > R
<sub>温馨提示：中文项目泛指「文档母语为中文」OR「含有中文翻译」的项目，通常在项目的「readme/wiki/官网」可以找到</sub>

|#|Repository|Description|Stars|Updated|
|:-|:-|:-|:-|:-|
|1|[xiaodaigh/disk.frame](https://github.com/xiaodaigh/disk.frame)|Fast Disk-Based Parallelized Data Manipulation Framework for Larger-than-RAM Data|567|2021-09-15|
|2|[pzhaonet/mindr](https://github.com/pzhaonet/mindr)|an R package which converts markdown files (.md, .Rmd) into mindmaps (brainstorms)|540|2021-11-22|
|3|[crsh/papaja](https://github.com/crsh/papaja)|papaja (Preparing APA Journal Articles) is an R package that provides document formats to produce complete APA manuscripts from RMarkdown-files (PDF and Word documents) and helper functions that facil ...|489|2021-12-17|
|4|[GuangchuangYu/nCov2019](https://github.com/GuangchuangYu/nCov2019)|query stats of infected coronavirus cases|425|2021-06-10|
|5|[swsoyee/2019-ncov-japan](https://github.com/swsoyee/2019-ncov-japan)|🦠 Interactive dashboard for real-time recording of COVID-19 outbreak in Japan|361|2021-12-19|
|6|[erikgahner/PolData](https://github.com/erikgahner/PolData)|A dataset with political datasets|345|2021-12-16|
|7|[HenrikBengtsson/progressr](https://github.com/HenrikBengtsson/progressr)|三 R package: An Inclusive, Unifying API for Progress Updates|216|2021-12-19|
|8|[nanxstats/liftr](https://github.com/nanxstats/liftr)|🐳 Containerize R Markdown documents for continuous reproducibility|160|2021-12-19|
|9|[vincentarelbundock/WDI](https://github.com/vincentarelbundock/WDI)|R package to download World Bank data|147|2021-10-10|
|10|[joachim-gassen/tidycovid19](https://github.com/joachim-gassen/tidycovid19)|{tidycovid19}: An R Package to Download, Tidy and Visualize Covid-19 Related Data|144|2021-12-19|
|11|[hrbrmstr/docxtractr](https://github.com/hrbrmstr/docxtractr)|:scissors: Extract Tables from Microsoft Word Documents with R|144|2021-10-02|
|12|[ShichenXie/scorecard](https://github.com/ShichenXie/scorecard)|Scorecard Development in R, 评分卡|131|2021-11-28|
|13|[benmarwick/ctv-archaeology](https://github.com/benmarwick/ctv-archaeology)|CRAN Task View: Archaeological Science|109|2021-12-10|
|14|[quanteda/stopwords](https://github.com/quanteda/stopwords)|Multilingual Stopword Lists in R|101|2021-10-28|
|15|[quanteda/readtext](https://github.com/quanteda/readtext)|an R package for reading text files|98|2021-07-13|
|16|[ShixiangWang/sigminer](https://github.com/ShixiangWang/sigminer)|🌲 An easy-to-use and scalable toolkit for genomic alteration signature (a.k.a. mutational signature) analysis and visualization in R https://shixiangwang.github.io/sigminer/reference/index.html|91|2021-12-15|
|17|[psychbruce/ChineseNames](https://github.com/psychbruce/ChineseNames)|🀄 Chinese Name Database (1930-2008)|79|2021-11-29|
|18|[psychbruce/bruceR](https://github.com/psychbruce/bruceR)|🛠 BRoadly Useful Convenient and Efficient R functions that BRing Users Concise and Elegant R data analyses.|76|2021-12-12|
|19|[lilywang1988/eSIR](https://github.com/lilywang1988/eSIR)|Extended state-space SIR epidemiological models|62|2021-11-08|
|20|[ropensci/UCSCXenaTools](https://github.com/ropensci/UCSCXenaTools)|:package: An R package for accessing genomics data from UCSC Xena platform, from cancer multi-omics to single-cell RNA-seq https://cran.r-project.org/web/packages/UCSCXenaTools/|62|2021-09-15|
|21|[ChiLiubio/microeco](https://github.com/ChiLiubio/microeco)|An R package for data analysis in microbial community ecology|60|2021-12-18|
|22|[jmzeng1314/AnnoProbe](https://github.com/jmzeng1314/AnnoProbe)|-|58|2021-08-01|
|23|[ykang/gratis](https://github.com/ykang/gratis)|GRATIS: GeneRAting TIme Series with diverse and controllable characteristics|57|2021-12-18|
|24|[hope-data-science/tidyfst](https://github.com/hope-data-science/tidyfst)|Tidy Verbs for Fast Data Manipulation|54|2021-09-27|
|25|[openbiox/UCSCXenaShiny](https://github.com/openbiox/UCSCXenaShiny)|📊 An R package for interactively exploring UCSC Xena https://xenabrowser.net/datapages/|49|2021-12-13|
|26|[reconverse/outbreaks](https://github.com/reconverse/outbreaks)|outbreaks: an R package compiling disease outbreak data|48|2021-08-06|
|27|[harryprince/geospark](https://github.com/harryprince/geospark)|bring sf to spark in production|46|2021-12-13|
|28|[koheiw/newsmap](https://github.com/koheiw/newsmap)|Newsmap: geographical news classifier|46|2021-11-18|
|29|[ykang51/bdar](https://github.com/ykang51/bdar)|巨量資料分析-使用 R 語言 (Big Data Analytics with R) lecture slides and source codes|45|2021-06-17|
|30|[eco-hydro/phenofit](https://github.com/eco-hydro/phenofit)|R package: A state-of-the-art Vegetation Phenology extraction package, phenofit|43|2021-12-19|
|31|[uribo/zipangu](https://github.com/uribo/zipangu)|Japanese utility functions and data|41|2021-12-11|
|32|[pzhaonet/pinyin](https://github.com/pzhaonet/pinyin)|an R package for converting Chineses characters into pinyin|39|2021-08-22|
|33|[koheiw/LSX](https://github.com/koheiw/LSX)|A word embeddings-based semi-supervised model for document scaling|38|2021-10-27|
|34|[ropensci/comtradr](https://github.com/ropensci/comtradr)|Functions for Interacting with the UN Comtrade API|37|2021-11-26|
|35|[rOpenStats/COVID19analyticsBak2109](https://github.com/rOpenStats/COVID19analyticsBak2109)|-|32|2021-10-03|
|36|[ropensci/scrubr](https://github.com/ropensci/scrubr)|Clean species occurrence records|32|2021-06-11|
|37|[jokergoo/HilbertCurve](https://github.com/jokergoo/HilbertCurve)|Visualize genomic data by Hilbert curve|31|2021-09-29|
|38|[jincheng9/stock_crawler](https://github.com/jincheng9/stock_crawler)|R API for Crawling Stock and Index Data from Sina Finance|31|2021-11-08|
|39|[mponce0/covid19.analytics](https://github.com/mponce0/covid19.analytics)|R package to obtain and analyze live data from the nCOVID19 coronavirus|30|2021-09-13|
|40|[Merck/r2rtf](https://github.com/Merck/r2rtf)|Easily Create Production-Ready Rich Text Format (RTF) Table and Figure|30|2021-12-17|
|41|[atmoschem/vein](https://github.com/atmoschem/vein)| R+Fortran+OpenMP package to estimate Vehicular Emissions INventories VEIN. |30|2021-12-16|
|42|[ahb108/rcarbon](https://github.com/ahb108/rcarbon)|Methods for calibrating and analysing radiocarbon dates|30|2021-12-15|
|43|[koheiw/seededlda](https://github.com/koheiw/seededlda)|Semisupervided LDA for theory-driven text analysis|29|2021-10-10|
|44|[mlampros/textTinyR](https://github.com/mlampros/textTinyR)|Text Processing for Small or Big Data Files in R|29|2021-11-30|
|45|[sbg/sevenbridges-r](https://github.com/sbg/sevenbridges-r)|Seven Bridges API Client, CWL Schema, Meta Schema, and SDK Helper in R|29|2021-08-16|
|46|[bnosac/ETM](https://github.com/bnosac/ETM)|Topic Modelling in Semantic Embedding Spaces|26|2021-11-11|
|47|[taiyun/Optimization-using-R](https://github.com/taiyun/Optimization-using-R)|A Chinese document about optimization using R|26|2021-06-30|
|48|[YongxinLiu/EasyMicrobiome](https://github.com/YongxinLiu/EasyMicrobiome)|Scripts and databases for amplicon and metagenome|25|2021-10-27|
|49|[mountainMath/tongfen](https://github.com/mountainMath/tongfen)|Convenience functions for making data on different geometries, especially Canadian census geometries, comparable.|24|2021-11-19|
|50|[skgrange/rmweather](https://github.com/skgrange/rmweather)|Tools to Conduct Meteorological Normalisation on Air Quality Data|24|2021-10-14|
|51|[tianshu129/foqat](https://github.com/tianshu129/foqat)|Field observation quick analysis toolkit (kw: field observation, air polltion, time series summary, time series resampling, average variation, ozone formation potential (OFP), MIR, tuv). |23|2021-11-18|
|52|[msberends/cleaner](https://github.com/msberends/cleaner)|Fast and Easy Data Cleaning (in R)|23|2021-06-22|
|53|[XSLiuLab/tumor-immunogenicity-score](https://github.com/XSLiuLab/tumor-immunogenicity-score)|TIGS (Tumor Immunogenicity Score) project https://doi.org/10.7554/eLife.49020|22|2021-09-16|
|54|[patrickreidy/textgRid](https://github.com/patrickreidy/textgRid)|Praat TextGrid Objects in R|19|2021-06-29|
|55|[wu-yc/scMetabolism](https://github.com/wu-yc/scMetabolism)|Quantifying metabolism activity at the single-cell resolution|18|2021-09-14|
|56|[kevinwang09/learningtower](https://github.com/kevinwang09/learningtower)|Easily accessible PISA data|18|2021-09-07|
|57|[gee-hydro/gee_whittaker](https://github.com/gee-hydro/gee_whittaker)|Non-parametric weighted Whittaker smoothing|18|2021-06-07|
|58|[CBIIT/LDlinkR](https://github.com/CBIIT/LDlinkR)|LDlinkR|17|2021-10-07|
|59|[yukiyanai/quant-methods-R](https://github.com/yukiyanai/quant-methods-R)|Repository for "Quantitative Methods in Political Science Using R" by Masahiko Asano and Yuki Yanai|15|2021-11-17|
|60|[pzhaonet/beginr](https://github.com/pzhaonet/beginr)|an R package for beginners|15|2021-12-03|
|61|[r-stata/hotkeys](https://github.com/r-stata/hotkeys)|自定义 RStudio 快捷键！|14|2021-07-29|
|62|[justinchuntingho/songotsti](https://github.com/justinchuntingho/songotsti)|A Package for Cantonese Tokenisation|13|2021-06-17|
|63|[fragla/eq5d](https://github.com/fragla/eq5d)|-|13|2021-11-22|
|64|[datasketch/shi18ny](https://github.com/datasketch/shi18ny)|-|13|2021-06-10|
|65|[chuiqin/irGSEA](https://github.com/chuiqin/irGSEA)|The integration of single cell rank-based gene set enrichment analysis|12|2021-11-26|
|66|[Hong-Kong-Districts-Info/hkdatasets](https://github.com/Hong-Kong-Districts-Info/hkdatasets)|Datasets relating to Hong Kong|12|2021-09-04|
|67|[massimoaria/dimensionsR](https://github.com/massimoaria/dimensionsR)|Gathering metadata about publications, patents, grants, clinical trials and policy documents from DS Dimensions using DSL API|12|2021-06-07|
|68|[jirotubuyaki/CRPClustering](https://github.com/jirotubuyaki/CRPClustering)|CRPClustering: An R Package for Bayesian Nonparametric Chinese Restaurant Process Clustering with Entropy|12|2021-07-02|
|69|[davidycliao/redguards](https://github.com/davidycliao/redguards)|This is a designed package for replicating the estimates and findings in the article of Factionalism and the Red Guards under Mao's China: Ideal Point Estimation Using Text Data. |11|2021-12-06|
|70|[reconhub/epicontacts](https://github.com/reconhub/epicontacts)|Handling, Visualisation and Analysis of Epidemiological Contacts|11|2021-11-23|
|71|[sstoeckl/crypto2](https://github.com/sstoeckl/crypto2)|Cryptocurrency Market Data|10|2021-09-21|
|72|[helixcn/spaa](https://github.com/helixcn/spaa)|Miscellaneous functions for analysis of species association and niche overlap|10|2021-08-12|
|73|[l-ramirez-lopez/resemble](https://github.com/l-ramirez-lopez/resemble)|resemble is an R package which implements functions dedicated to non-linear modelling of complex spectroscopy data|10|2021-11-26|
|74|[Detlew/PowerTOST](https://github.com/Detlew/PowerTOST)|Power and Sample Size for (Bio)Equivalence Studies|9|2021-09-25|
|75|[majianthu/aps2020](https://github.com/majianthu/aps2020)|Code for the paper 'Variable Selection with Copula Entropy' published on Chinese Journal of Applied Probability and Statistics|8|2021-10-17|
|76|[DongqiangZeng0808/Blasso](https://github.com/DongqiangZeng0808/Blasso)|Integrating LASSO and bootstrapping algorithm to find best prognostic or predictive biomarkers|8|2021-10-26|
|77|[esowc/UNSEEN-open](https://github.com/esowc/UNSEEN-open)|An open, reproducible and transferable workflow to assess and anticipate climate extremes beyond the observed record|8|2021-09-14|
|78|[dazamora/DWBmodelUN](https://github.com/dazamora/DWBmodelUN)|R native implementation of the Dynamic Water Balance hydrologic model in a monthly time step |8|2021-09-29|
|79|[OxDemTech/china_diplomats](https://github.com/OxDemTech/china_diplomats)|-|7|2021-11-16|
|80|[YuLab-SMU/nCov2019](https://github.com/YuLab-SMU/nCov2019)|:microbe: Exploring COVID-19 data|7|2021-12-13|
|81|[sammo3182/regioncode](https://github.com/sammo3182/regioncode)|Software for converting regional administrative codes (China) over years|7|2021-08-05|
|82|[Otoliths/SP2000](https://github.com/Otoliths/SP2000)|🐟Catalogue of Life toolkit for R|7|2021-06-11|
|83|[lexcomber/GWRroutemap](https://github.com/lexcomber/GWRroutemap)|the GWR route maps for physical and human geography|7|2021-11-17|
|84|[sascha2schroeder/popEye](https://github.com/sascha2schroeder/popEye)|An R package to analyze eye-tracking data from reading experiments|7|2021-11-01|
|85|[seroanalytics/serosolver](https://github.com/seroanalytics/serosolver)|Inference framework for serological data|7|2021-11-08|
|86|[Wytamma/GISAIDR](https://github.com/Wytamma/GISAIDR)|Programmatically interact with the GISAID database.|6|2021-12-19|
|87|[chainsawriot/sweater](https://github.com/chainsawriot/sweater)|👚 Speedy Word Embedding Association Test & Extras using R|6|2021-12-07|
|88|[ji1ai1/201907-CIKMI](https://github.com/ji1ai1/201907-CIKMI)|CIKM 2019 EComm AI：超大规模推荐之用户兴趣高效检索|6|2021-09-10|
|89|[ShixiangWang/tinyscholar](https://github.com/ShixiangWang/tinyscholar)|A Tiny R Package to Get and Show Google Scholar Profile|6|2021-10-26|
|90|[leileibama/leoDDcalculator](https://github.com/leileibama/leoDDcalculator)|leoDDcalculator, a package calculating the values of mdd and ndd of texts in a folder|6|2021-11-08|

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