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Tools and Toolsets

BARs that are installed in the ImageJ Toolbar and can be installed using the BAR>Tool Installers menu (see BAR Menu organization).

Tools

Single Tools are appended to the IJ toolbar and are typically saved in the ImageJ/macro/tools/ directory. Note, however, that Tools placed in ImageJ/plugins/Tools/ are automatically listed in the ">>" drop-menu in the main ImageJ window, which may be convenient when installing individual files manually.

###Calibration Menu Provides shortcuts for spatial calibration of images lacking metadata. (Download .ijm)

###List Folder Menu Provides a drop-down-list of the contents of a specified directory that is remembered across restarts. Offers commands to reveal directories in the native file browser and commands to list directory contents to dedicated windows. (Download .ijm)

###Segment Profile Extracts the segments within a straight line that are above a cutoff threshold. (Download .ijm)

(See also Image Segmentation)

###Shortcuts Menu Lists the user's most used commands. List is remembered across restarts. (Download .ijm)

Toolsets

Toolsets replace the user's toolbar and are listed in the toolbar's ">>" menu when saved in the ImageJ/macros/toolsets directory.

###ROI Manager Tools Renames selections stored in the ROI Manager. (Download .ijm) (Documentation page)

See also Image Annotation

###Toolset Creator Creates toolbar menus for running plugins, macros and scripts. It can also group built-in tools (such as drawing tools) in custom toolsets. It is distributed with ImageJ since IJ 1.41. (Download .ijm)

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