diff --git a/CRAN-SUBMISSION b/CRAN-SUBMISSION index 10ba117..76bdc40 100644 --- a/CRAN-SUBMISSION +++ b/CRAN-SUBMISSION @@ -1,3 +1,3 @@ -Version: 1.1.2 -Date: 2025-01-28 03:02:05 UTC -SHA: f91fc2ec56112621d5517558a7df6f968e65195c +Version: 2.0.0 +Date: 2026-03-26 04:38:51 UTC +SHA: 160f141ac87b72c51eb0f89cff7ec235c083399d diff --git a/DESCRIPTION b/DESCRIPTION index d9f6402..bc4e0b3 100644 --- a/DESCRIPTION +++ b/DESCRIPTION @@ -13,8 +13,7 @@ Description: The process of resolving and updating taxon names is necessary when (APC) and the Australian Plant Name Index (APNI) to align and update plant taxon names to current, accepted standards. 'APCalign' also supplies information about the establishment status (i.e. native or introduced) of - plant taxa across different states/territories. See Falster et al. (2024) - . + plant taxa across different states/territories. License: MIT + file LICENSE Encoding: UTF-8 Language: en diff --git a/cran-submission.md b/cran-submission.md deleted file mode 100644 index 4fd631e..0000000 --- a/cran-submission.md +++ /dev/null @@ -1,38 +0,0 @@ -# CRAN submission — APCalign 2.0.0 - -Date: 2026-03-25 - -## Summary of changes - -This is a major version release. Key additions and changes since 1.1.6: - -### New functions -- `synonyms_for_accepted_names()`: returns synonyms for currently accepted taxon names. -- `clear_cached_resources()`: clears the in-session cache set by `load_taxonomic_resources()`. - -### Improvements -- `load_taxonomic_resources()` caches results in memory for the R session; - repeated calls with the same version return immediately without re-downloading. -- `load_taxonomic_resources()` works offline when parquet files are already - cached locally; `default_version()` falls back to the most recently cached - local version when no internet connection is available. -- `create_species_state_origin_matrix()` and `native_anywhere_in_australia()` - gain an `include_infrataxa` parameter (addresses user requests, closes #265). -- State/territory columns reordered (main states/territories alphabetically, - then smaller territories); `family` and `taxon_id` columns added to output. -- Internal taxonomic resource tables renamed to snake_case; `family` column - added to resource tables (breaking change for direct table access). -- `standardise_names()` now strips leading `(` from genus names. - -## Test environments - -- Local: macOS 15 (aarch64), R 4.4.x -- GitHub Actions: ubuntu-latest (R release, R devel), macOS-latest, windows-latest - -## R CMD check results - -0 errors | 0 warnings | 0 notes - -## Reverse dependencies - -None on CRAN.