diff --git a/man/APCalign.Rd b/man/APCalign.Rd index fe32d2f..fe26474 100644 --- a/man/APCalign.Rd +++ b/man/APCalign.Rd @@ -50,6 +50,7 @@ Useful links: Authors: \itemize{ + \item Elizabeth Wenk \email{e.wenk@unsw.edu.au} (\href{https://orcid.org/0000-0001-5640-5910}{ORCID}) [copyright holder] \item Daniel Falster \email{daniel.falster@unsw.edu.au} (\href{https://orcid.org/0000-0002-9814-092X}{ORCID}) [contributor] \item Will Cornwell \email{w.cornwell@unsw.edu.au} (\href{https://orcid.org/0000-0003-4080-4073}{ORCID}) [contributor] \item Fonti Kar \email{f.kar@unsw.edu.au} (\href{https://orcid.org/0000-0002-2760-3974}{ORCID}) [contributor] diff --git a/man/align_taxa.Rd b/man/align_taxa.Rd index f5be608..9046e0c 100644 --- a/man/align_taxa.Rd +++ b/man/align_taxa.Rd @@ -213,8 +213,8 @@ aligned_taxa <- \seealso{ \code{\link{load_taxonomic_resources}} -Other taxonomic alignment functions: -\code{\link{create_taxonomic_update_lookup}()}, -\code{\link{update_taxonomy}()} +Other taxonomic alignment functions: +\code{\link[=create_taxonomic_update_lookup]{create_taxonomic_update_lookup()}}, +\code{\link[=update_taxonomy]{update_taxonomy()}} } \concept{taxonomic alignment functions} diff --git a/man/create_species_state_origin_matrix.Rd b/man/create_species_state_origin_matrix.Rd index f609e4d..046478e 100644 --- a/man/create_species_state_origin_matrix.Rd +++ b/man/create_species_state_origin_matrix.Rd @@ -38,8 +38,8 @@ returns state level native, introduced and more complicated origins status for a \seealso{ \code{\link{load_taxonomic_resources}} -Other diversity methods: -\code{\link{native_anywhere_in_australia}()}, -\code{\link{state_diversity_counts}()} +Other diversity methods: +\code{\link[=native_anywhere_in_australia]{native_anywhere_in_australia()}}, +\code{\link[=state_diversity_counts]{state_diversity_counts()}} } \concept{diversity methods} diff --git a/man/create_taxonomic_update_lookup.Rd b/man/create_taxonomic_update_lookup.Rd index 204bba1..1ff525b 100644 --- a/man/create_taxonomic_update_lookup.Rd +++ b/man/create_taxonomic_update_lookup.Rd @@ -197,8 +197,8 @@ create_taxonomic_update_lookup( \seealso{ \code{\link{load_taxonomic_resources}} -Other taxonomic alignment functions: -\code{\link{align_taxa}()}, -\code{\link{update_taxonomy}()} +Other taxonomic alignment functions: +\code{\link[=align_taxa]{align_taxa()}}, +\code{\link[=update_taxonomy]{update_taxonomy()}} } \concept{taxonomic alignment functions} diff --git a/man/native_anywhere_in_australia.Rd b/man/native_anywhere_in_australia.Rd index f4e63c2..769b981 100644 --- a/man/native_anywhere_in_australia.Rd +++ b/man/native_anywhere_in_australia.Rd @@ -39,8 +39,8 @@ within-Australia invasions, use \link{create_species_state_origin_matrix}. \donttest{native_anywhere_in_australia(c("Eucalyptus globulus","Pinus radiata","Banksis notaspecies"))} } \seealso{ -Other diversity methods: -\code{\link{create_species_state_origin_matrix}()}, -\code{\link{state_diversity_counts}()} +Other diversity methods: +\code{\link[=create_species_state_origin_matrix]{create_species_state_origin_matrix()}}, +\code{\link[=state_diversity_counts]{state_diversity_counts()}} } \concept{diversity methods} diff --git a/man/reexports.Rd b/man/reexports.Rd index 22300d2..09640bf 100644 --- a/man/reexports.Rd +++ b/man/reexports.Rd @@ -11,6 +11,6 @@ These objects are imported from other packages. Follow the links below to see their documentation. \describe{ - \item{dplyr}{\code{\link[dplyr:reexports]{\%>\%}}} + \item{dplyr}{\code{\link[dplyr:\%>\%]{\%>\%}}} }} diff --git a/man/state_diversity_counts.Rd b/man/state_diversity_counts.Rd index c924fd1..5a1d7f1 100644 --- a/man/state_diversity_counts.Rd +++ b/man/state_diversity_counts.Rd @@ -41,8 +41,8 @@ and more complicated species origins \seealso{ \code{\link{load_taxonomic_resources}} -Other diversity methods: -\code{\link{create_species_state_origin_matrix}()}, -\code{\link{native_anywhere_in_australia}()} +Other diversity methods: +\code{\link[=create_species_state_origin_matrix]{create_species_state_origin_matrix()}}, +\code{\link[=native_anywhere_in_australia]{native_anywhere_in_australia()}} } \concept{diversity methods} diff --git a/man/update_taxonomy.Rd b/man/update_taxonomy.Rd index 44a2f01..4392073 100644 --- a/man/update_taxonomy.Rd +++ b/man/update_taxonomy.Rd @@ -132,8 +132,8 @@ update_taxonomy( \seealso{ load_taxonomic_resources -Other taxonomic alignment functions: -\code{\link{align_taxa}()}, -\code{\link{create_taxonomic_update_lookup}()} +Other taxonomic alignment functions: +\code{\link[=align_taxa]{align_taxa()}}, +\code{\link[=create_taxonomic_update_lookup]{create_taxonomic_update_lookup()}} } \concept{taxonomic alignment functions}