Commit 5ef5adc
Updates for ccpp-capgen v1 (#378)
* [scm/dev] Ability to build with ip and sp library (NCAR#1208)
* Add ability to build with ip if it is found. sp is being replaced by ip so this is needed. Note that in spack-stack 1.9.3 the ip package builds with the OpenMP flag, so CMAKE_Fortran_FLAGS_OPENMP_OFF needs to be set by the host model. The RRTMGP files currently break if compiled with OpenMP flags.
* only have DTC/SCM people in the CODEOWNERS for the scm/dev branch
---------
Co-authored-by: Soren Rasmussen <s.c.rasmussen@gmail.com>
* [main] Followup for NCAR#1187 for NOAA models (NCAR#1205)
* update several files to work with CCPP SCM after PR 1187
* remove ccpp_bcast for aerin and aer_pres due to UFS RT hanging
* [scm/dev] Update scm/dev from main (includes ccpp_bcast PR + followup NOAA fixes) (NCAR#1209)
* Read and broadcast data from MPI root rank during init and timestep init phase in GFS time vary; add time vary interstitials for NEPTUNE (NCAR#1187)
* 1. number_of_coefficients_in_ozone_data --> number_of_coefficients_in_ozone_forcing_data
2. Add NEPTUNE interstitials in physics/Interstitials/UFS_SCM_NEPTUNE/
* Read and broadcast data in CCPP init and timestep_init phases instead of reading with every MPI rank
* In physics/Radiation/radiation_astronomy.f, replace hardcoded zero with mpiroot; move mpiutil.F90 to subdirectory tools
* physics/tools/mpiutil.F90: add temporary routine to mpi-abort the model if MPI broadcast errors occur
* Bug fixes in physics/Interstitials/UFS_SCM_NEPTUNE/GFS_time_vary_pre.*.F90 when writing to errmsg for invalid w3kindreal/w3kindint; additionally: formatting updates
* In physics/Radiation/radiation_astronomy.f, replace hardcoded zero with mpiroot; move mpiutil.F90 to subdirectory tools
* Add ability to build with ip if it is found. sp is being replaced by ip so this is needed. Note that in spack-stack 1.9.3 the ip package builds with the OpenMP flag, so CMAKE_Fortran_FLAGS_OPENMP_OFF needs to be set by the host model. The RRTMGP files currently break if compiled with OpenMP flags.
* update several files to work with CCPP SCM after PR 1187
* remove ccpp_bcast for aerin and aer_pres due to UFS RT hanging
---------
Co-authored-by: Dom Heinzeller <dom.heinzeller@icloud.com>
Co-authored-by: Soren Rasmussen <s.c.rasmussen@gmail.com>
* [main] ccpp-physics SciDocs to github pages (NCAR#1207)
* add doxygen action
* minor changes
* minor changes
* minor changes
* doxy only
* Create main.yml
* Create jekyll-gh-pages.yml
* change
* add doxyfile into wkfl
* Update doxygen.yml
* Update doxygen.yml
* Update doxygen.yml
* Update doxygen.yml
* Update doxygen.yml
* Update doxygen.yml
* Update doxygen.yml
* Update doxygen.yml
* Update doxygen.yml
* Update doxygen.yml
* Update doxygen.yml
* Update doxygen.yml
* Update ccpp_doxyfile
* Update ccpp_doxyfile
* update ccpp doxyfile
* Update doxygen.yml
* update doxyfile
* Update doxygen.yml
* Update doxygen.yml
* update doxyfile
* Update doxygen.yml
* Update doxygen.yml
* Update doxygen.yml
* Update doxygen.yml
* Update doxygen.yml
* Update doxygen.yml
* Update doxygen.yml
* Update doxygen.yml
* Update doxygen.yml
* Update doxygen.yml
* Update doxygen.yml
* Update doxygen.yml
* Update doxygen.yml
* Update doxygen.yml
* Update doxygen.yml
* Update doxygen.yml
* Update doxygen.yml
* Update doxygen.yml
* Update doxygen.yml
* Update doxygen.yml
* Update doxygen.yml
* Update doxygen.yml
* Update doxygen.yml
* Update doxygen.yml
* change path
* add mactex
* add mactex
* minor changes
* minor fix
* try1
* try1
* try2
* updates
* update perl
* update perl
* update path
* explicitly install
* updates
* updates
* fix
* fix path
* fix
* fix path
* fixes
* fix3
* cleanup
* restore yml files
* hsd updates
* add doxygen.yml
* update branch
* update wflw
* test
* fix
* fix
* fix
* fix
* rearrange steps
* oops
* .
* debug
* chng dir
* chng dir
* chng dir
* -landing page
* -update para
* try to add a backlink, fix typo
* fix css link
* link path
* try cp stylesheet
* Add CCPP website
* fix
* add SRW build, backlink
* try mainpage
* changes for mainpage
* mainpage config
* mainpage config
* mainpage config
* mainpage debug
* mainpage debug
* mainpage debug
* mainpage debug
* mainpage debug
* fix landing page sidebar.
* fix landing page sidebar.
* fix landing page sidebar.
* fix landing page sidebar.
* style updates
* mainpage style
* mainpage style
* hide tree on mainpage
* add back tree
* try adding backlink
* add backlink to other pages
* updates migrated from mzhangw
* fix missed conflicts
* fix syntax
* run workflow on this branch
* remove branch from workflow run, update doxyfile
* mods to mainpag dxy
* updates
* try update for v7 arg table
* turn on scidoc branch for deploy
* recurse checkout
* fix directory
* try fix
* update landing page with acknowledgements
* fix path
* fix path
* debug
* add prebuild_config for building tables
* fix
* debug
* debug
* restructure workflow to work with metadata2html.py
* add remaining prebuild configs
* attempt fix srwv3 checkout
* fix main checkout for landing page, stash prebuild configs
* fix syntax
* update prebuild location
* workflow updates
* point to NCAR/main
---------
Co-authored-by: mzhangw <man.zhang@noaa.gov>
Co-authored-by: mzhangw <mzhangw@gmail.com>
Co-authored-by: Grant Firl <grant.firl@noaa.gov>
* fix: update actions/checkout version to v6, v4 uses deprecated nodejs version. Updating other actions to their newest release (NCAR#1215)
Co-authored-by: Grant Firl <grant.firl@noaa.gov>
* First round of updates and bug fixes for capgen-ng
* Update submodule pointer for physics/MP/TEMPO/TEMPO
* Minor bugfixes for building with capgen-ng in SCM
* ufs-dev PR#337 (NCAR#1212)
* remove Zhao-Carr cloud schemes and combine Xu-Randall cloud fraction calculations
* change Xu-Randall cloud fraction scheme to be elemental
* use new cld_frac_XuRandall function from module_radiation_clouds in RRTMGP scheme
* modify the cld_frac_XuRandall function call in RRTMGP scheme
* add the repository update to this PR
* Revert "add the repository update to this PR"
This reverts commit 565d62c.
* remove the printing tests
* remove Zhao-Carr schemes from modules in the UFS_SCM_NEPTUNE directory
* remove Zhao-Carr microphysics scheme from physics/MP directory
* remove non-ASCII character in canopy_levs.F90 (from previous PR)
* Apply suggestion from @matusmartini
Co-authored-by: Matus Martini <matusmartini@users.noreply.github.com>
---------
Co-authored-by: Qingfu Liu <Qingfu.Liu@noaa.gov>
Co-authored-by: Grant Firl <grant.firl@noaa.gov>
Co-authored-by: Matus Martini <matusmartini@users.noreply.github.com>
* Metadata corrections from ccpp_validator.py
* Correct dimensions for air_pressure_at_interface in physics/MP/Ferrier_Aligo/mp_fer_hires.meta
* physics/Interstitials/UFS_SCM_NEPTUNE/GFS_phys_time_vary.neptune.meta: fix intent for xlat_d and xlon_d
* ufs-dev PR#363 PR#339 PR#364 (NCAR#1213)
* remove Zhao-Carr cloud schemes and combine Xu-Randall cloud fraction calculations
* change Xu-Randall cloud fraction scheme to be elemental
* Fixed too-high lower bound for SMC
Deleted code associated with already removed print statements
Deleted excess comments.
* use new cld_frac_XuRandall function from module_radiation_clouds in RRTMGP scheme
* Tidy-up for PR.
* modify the cld_frac_XuRandall function call in RRTMGP scheme
* Changes to the post L-IAU checks:
* Change tfreeze to match that in NoahMP
* Only set SLC to SMC if temp newly > tfreez
* add the repository update to this PR
* Revert "add the repository update to this PR"
This reverts commit 565d62c.
* remove the printing tests
* remove Zhao-Carr schemes from modules in the UFS_SCM_NEPTUNE directory
* remove Zhao-Carr microphysics scheme from physics/MP directory
* Update for 10m wind option in fire_behavior module
* remove non-ASCII character in canopy_levs.F90 (from previous PR)
* Updates to progomega option of saSAS convection scheme
* Correction
* correction 2
* Correct parameter setting in samfshalcnv to pass debug runs
* address saturation vapor pressure out of bounds error in hafs_4_nest RT
---------
Co-authored-by: Qingfu Liu <Qingfu.Liu@noaa.gov>
Co-authored-by: Clara.Draoper-NOAA <clara.draper@noaa.gov>
Co-authored-by: Grant Firl <grant.firl@noaa.gov>
Co-authored-by: Michael Kavulich, Jr <kavulich@ucar.edu>
Co-authored-by: Lisa <lisa.bengtsson@noaa.gov>
Co-authored-by: Rhae Sung Kim <rhaesung.kim@noaa.gov>
* Metadata corrections from ccpp_validator.py (NCAR#1219)
* resubmission: Small inconsistency between metadata and fortran code (NCAR#1222)
* Fix fortran to metadata inconsistency
* Actual fix
---------
Co-authored-by: dustinswales <dswales@ucar.edu>
* Some small changes
* UFS/dev PR#299 (NCAR#1220)
* update standard names to move Xgrs to physics_timestep_initial* and remove *_of_new_state (default name refers to 'current' value)
* fix a few unchanged standard names
* change some timestep_initial variables to general variables; make satmedmfvdifq return new tendencies and new tendency application block in GFS_PBL_generic_post
* Refactor physics tendency calculations
- Added tendency variables (`ten_t`, `ten_u`, `ten_v`) for temperature and wind tendencies in SAMF deep and shallow convection schemes.
- Updated relevant `.meta` files to reflect changes in variable intent (`inout` -> `in` where appropriate) and added tendencies.
- Modified Interstitials (`GFS_DCNV_generic_post`, `GFS_DCNV_generic_pre`, `GFS_SCNV_generic_post`, `GFS_SCNV_generic_pre`) to directly use tendencies instead of saved state variables.
- Removed redundant saved variables (`save_u`, `save_v`, `save_t`).
- Added `delt` to post interstitials.
* update unified_ugwp, ugwpv1, and drag_suite to use new tendency code
* save tendency work with GFS_photochemistry
* add tracer tendency changes to convection; fix typos in GFS_photochemistry
* fix typo in samfdeepcnv.f
* save tendency work with Thompson MP
* save tendency work with radiation
* add FMS to ccpp-physics CMakeLists.txt for fv3
* add initial setting of state in GFS_time_vary_pre.fv3; fix horizontal_dimension in GFS_time_vary_pre.scm
* fix metadata in GFS_time_vary_pre.fv3
* add momentum tendency output to mp_thompson and fix intent in metadata
* fix array size bug in mp_thompson.F90; cleanup dtend code using new tendency paradigm; cleanup saving of states no longer needed
* fix improperly-merged conflict resolution in GFS_photochemistry.F90
* fix access of ntlnc/ntinc access of tracer array when missing
* convert many RAD, PBL, GWD, CONV, and MP schemes to return tendencies
* convert MG micro and Arakawa-Wu adjustment schemes
* convert MYNNEDMF PBL scheme to return tendencies
* add changes to MYNN EDMF PBL
* add back divide-by-zero bugfix in module_sf_noahmp_glacier.F90 that was removed recently
* remove obsolete interstitial schemes
* fix 2 minor compilation issues after testing with UFS RTs
* fix bug in MG MP
* fix near-surface air temperature standard name in GFS_surface_composites_pre
* apply tendency cleanup to GFDLMPv3 and TEMPO
* fix compilation error
* fix typo in TEMPO
* debug sgscloud_radpre/post
* remove tendency application code from rrtmg_lw/sw_post
* change thmpsn to thompson to fix compilation error
* fix compilation errors in GFS_radiation_post.F90
* remove Zhao-Carr cloud schemes and combine Xu-Randall cloud fraction calculations
* fix array size problem in cs_conv.F90
* refactor RAS tendencies
* fix compilation error in rascnv.F90
* change Xu-Randall cloud fraction scheme to be elemental
* Fixed too-high lower bound for SMC
Deleted code associated with already removed print statements
Deleted excess comments.
* use new cld_frac_XuRandall function from module_radiation_clouds in RRTMGP scheme
* Tidy-up for PR.
* modify the cld_frac_XuRandall function call in RRTMGP scheme
* Changes to the post L-IAU checks:
* Change tfreeze to match that in NoahMP
* Only set SLC to SMC if temp newly > tfreez
* add the repository update to this PR
* Revert "add the repository update to this PR"
This reverts commit 565d62c.
* fix bug in GFDLMPv3 tendency implementation
* remove the printing tests
* remove Zhao-Carr schemes from modules in the UFS_SCM_NEPTUNE directory
* remove Zhao-Carr microphysics scheme from physics/MP directory
* fix hail tendency changes from reviewer suggestions
* fix indexing bug in cu_tiedtke caught in code review
* changes to RAS tendency application update code from code review
* check for flag_for_generic_tendency_due_to_gravity_wave_drag before computing diagnostic tendencies in drag_suite
* fix diagnostic tendency bug in physics/GWD/ugwpv1_gsldrag.F90
* remove unused arguments in physics/GWD/ugwpv1_gsldrag_post.F90
* fix tendency diagnostics in physics/GWD/unified_ugwp.F90
* fix merge problem in mp_thompson.meta
* add arguments to drag_suite_run called outside of ccpp entry point
* initialize dclw variables in cu_ntiedtke
* fix loop bounds for ten_q in cu_gf_driver.F90
* fix loop bounds in cu_c3_driver
* fix new_q typo in mp_fer_hires.F90
* deallocate locally-allocated variables in MP schemes
* update zeroing logic in m_micro_post after review
* Update for 10m wind option in fire_behavior module
* remove non-ASCII character in canopy_levs.F90 (from previous PR)
* Updates to progomega option of saSAS convection scheme
* Correction
* correction 2
* fix line in SHOC where a tracer was being updated directly
* remove old_ozone array since it was not being used
* deallocate local variables in satmedmfvdifq at end of run phase
* save temperature before modification to pass in to diagnostics in GFS_radiation_post
* fix diagnostic temp tendency in GFS_MP_generic.F90 for when radar is/isn't available
* Correct parameter setting in samfshalcnv to pass debug runs
* address saturation vapor pressure out of bounds error in hafs_4_nest RT
* update long names to remove 'updated by physics'; change prognostic updraft standard names
* remove additional references to Zhao-Carr microphysics
* remove Zhao-Carr references from GFS_scnv_generic_post
* fix deallocation statement in Thompson MP
* fix additional warnings
* Bug fix in physics/GWD/rayleigh_damp.f: don't mix scalars and rank-2 arrays
* remove whitespace changes in radiation_clouds.f
---------
Co-authored-by: VanderleiVargas-NOAA <vanderlei.vargas@noaa.gov>
Co-authored-by: Qingfu Liu <Qingfu.Liu@noaa.gov>
Co-authored-by: Clara.Draoper-NOAA <clara.draper@noaa.gov>
Co-authored-by: Michael Kavulich, Jr <kavulich@ucar.edu>
Co-authored-by: Lisa <lisa.bengtsson@noaa.gov>
Co-authored-by: Rhae Sung Kim <rhaesung.kim@noaa.gov>
Co-authored-by: Grant Firl <grant@Macbook-Air-M4.local>
Co-authored-by: Dom Heinzeller <dom.heinzeller@icloud.com>
* Add metadata to physcons.F90
* Fix metadata vs Fortran inconsistencies in GFS_PBL_generic_post.meta and mp_nssl.{F90,meta}
* Some inconsistencies found by validator
* Fix inconsistencies Fortran vs Metadata physics/Interstitials/UFS_SCM_NEPTUNE/GFS_rrtmgp_pre.meta
* Few more small changes
* number_of_openmp_threads --> number_of_physics_threads in all schemes
* C3
* Fix inconsistencies in metadata/fortran
* More metadata/source inconsistencies
* Ufs dev pr367 (NCAR#1223)
* update standard names to move Xgrs to physics_timestep_initial* and remove *_of_new_state (default name refers to 'current' value)
* fix a few unchanged standard names
* change some timestep_initial variables to general variables; make satmedmfvdifq return new tendencies and new tendency application block in GFS_PBL_generic_post
* Refactor physics tendency calculations
- Added tendency variables (`ten_t`, `ten_u`, `ten_v`) for temperature and wind tendencies in SAMF deep and shallow convection schemes.
- Updated relevant `.meta` files to reflect changes in variable intent (`inout` -> `in` where appropriate) and added tendencies.
- Modified Interstitials (`GFS_DCNV_generic_post`, `GFS_DCNV_generic_pre`, `GFS_SCNV_generic_post`, `GFS_SCNV_generic_pre`) to directly use tendencies instead of saved state variables.
- Removed redundant saved variables (`save_u`, `save_v`, `save_t`).
- Added `delt` to post interstitials.
* update unified_ugwp, ugwpv1, and drag_suite to use new tendency code
* save tendency work with GFS_photochemistry
* add tracer tendency changes to convection; fix typos in GFS_photochemistry
* fix typo in samfdeepcnv.f
* save tendency work with Thompson MP
* save tendency work with radiation
* add FMS to ccpp-physics CMakeLists.txt for fv3
* add initial setting of state in GFS_time_vary_pre.fv3; fix horizontal_dimension in GFS_time_vary_pre.scm
* fix metadata in GFS_time_vary_pre.fv3
* add momentum tendency output to mp_thompson and fix intent in metadata
* fix array size bug in mp_thompson.F90; cleanup dtend code using new tendency paradigm; cleanup saving of states no longer needed
* fix improperly-merged conflict resolution in GFS_photochemistry.F90
* fix access of ntlnc/ntinc access of tracer array when missing
* convert many RAD, PBL, GWD, CONV, and MP schemes to return tendencies
* convert MG micro and Arakawa-Wu adjustment schemes
* convert MYNNEDMF PBL scheme to return tendencies
* add changes to MYNN EDMF PBL
* add back divide-by-zero bugfix in module_sf_noahmp_glacier.F90 that was removed recently
* remove obsolete interstitial schemes
* fix 2 minor compilation issues after testing with UFS RTs
* fix bug in MG MP
* fix near-surface air temperature standard name in GFS_surface_composites_pre
* apply tendency cleanup to GFDLMPv3 and TEMPO
* fix compilation error
* fix typo in TEMPO
* debug sgscloud_radpre/post
* remove tendency application code from rrtmg_lw/sw_post
* change thmpsn to thompson to fix compilation error
* fix compilation errors in GFS_radiation_post.F90
* remove Zhao-Carr cloud schemes and combine Xu-Randall cloud fraction calculations
* fix array size problem in cs_conv.F90
* refactor RAS tendencies
* fix compilation error in rascnv.F90
* change Xu-Randall cloud fraction scheme to be elemental
* Fixed too-high lower bound for SMC
Deleted code associated with already removed print statements
Deleted excess comments.
* use new cld_frac_XuRandall function from module_radiation_clouds in RRTMGP scheme
* Tidy-up for PR.
* modify the cld_frac_XuRandall function call in RRTMGP scheme
* Changes to the post L-IAU checks:
* Change tfreeze to match that in NoahMP
* Only set SLC to SMC if temp newly > tfreez
* add the repository update to this PR
* Revert "add the repository update to this PR"
This reverts commit 565d62c.
* fix bug in GFDLMPv3 tendency implementation
* remove the printing tests
* remove Zhao-Carr schemes from modules in the UFS_SCM_NEPTUNE directory
* remove Zhao-Carr microphysics scheme from physics/MP directory
* fix hail tendency changes from reviewer suggestions
* fix indexing bug in cu_tiedtke caught in code review
* changes to RAS tendency application update code from code review
* check for flag_for_generic_tendency_due_to_gravity_wave_drag before computing diagnostic tendencies in drag_suite
* fix diagnostic tendency bug in physics/GWD/ugwpv1_gsldrag.F90
* remove unused arguments in physics/GWD/ugwpv1_gsldrag_post.F90
* fix tendency diagnostics in physics/GWD/unified_ugwp.F90
* fix merge problem in mp_thompson.meta
* add arguments to drag_suite_run called outside of ccpp entry point
* initialize dclw variables in cu_ntiedtke
* fix loop bounds for ten_q in cu_gf_driver.F90
* fix loop bounds in cu_c3_driver
* fix new_q typo in mp_fer_hires.F90
* deallocate locally-allocated variables in MP schemes
* update zeroing logic in m_micro_post after review
* Update for 10m wind option in fire_behavior module
* remove non-ASCII character in canopy_levs.F90 (from previous PR)
* Updates to progomega option of saSAS convection scheme
* Correction
* correction 2
* fix line in SHOC where a tracer was being updated directly
* remove old_ozone array since it was not being used
* deallocate local variables in satmedmfvdifq at end of run phase
* save temperature before modification to pass in to diagnostics in GFS_radiation_post
* Remove goto in physics/MP/Morrison_Gettelman/aer_cloud.F
* Remove goto in physics/Radiation/radiation_clouds.f
* fix diagnostic temp tendency in GFS_MP_generic.F90 for when radar is/isn't available
* Correct parameter setting in samfshalcnv to pass debug runs
* Name END DO
* Remove goto physics/MP/calpreciptype.f90
* Remove goto physics/MP/Morrison_Gettelman/cldwat2m_micro.F
* Start goto physics/SFC_Models/Land/RUC/module_sf_ruclsm.F90
* Remove goto physics/SFC_Layer/UFS/module_nst_model.f90
* address saturation vapor pressure out of bounds error in hafs_4_nest RT
* update long names to remove 'updated by physics'; change prognostic updraft standard names
* remove additional references to Zhao-Carr microphysics
* remove Zhao-Carr references from GFS_scnv_generic_post
* fix deallocation statement in Thompson MP
* Remove go to physics/CONV/C3/cu_c3_sh.F90
* Remove go to physics/PBL/MYJ/module_BL_MYJPBL.F90
* Remove goto physics/MP/Morrison_Gettelman/wv_saturation.F
* Again physics/MP/Morrison_Gettelman/wv_saturation.F
* physics/MP/Morrison_Gettelman/wv_saturation.F
* Typo
* Remove goto physics/CONV/C3/cu_c3_deep.F90
* Remove go to physics/CONV/RAS/rascnv.F90
* Typo rascnv.F90
* physics/SFC_Layer/GFDL/gfdl_sfc_layer.F90
* physics/CONV/Grell_Freitas/cu_gf_sh.F90
* Typo module_BL_MYJPBL.F90
* physics/SFC_Layer/MYJ/module_SF_JSFC.F90
* First pass physics/CONV/Grell_Freitas/cu_gf_deep.F90
* physics/CONV/Grell_Freitas/cu_gf_deep.F90
* physics/GWD/ugwp_driver_v0.F
* physics/MP/Thompson/module_mp_thompson.F90
* physics/PBL/MYNN_EDMF/module_bl_mynn.F90
* physics/MP/GFDL/v1_2019/gfdl_cloud_microphys_mod.F90
* physics/MP/GFDL/v3_2022/gfdl_cloud_microphys_v3_mod.F90
* Fix compile physics/Radiation/radiation_clouds.f
* Compile fixes
* Fix for 73 character limit line
* Compile fix
* Start physics/SFC_Models/Land/RUC/module_sf_ruclsm.F90
* physics/SFC_Models/Land/Noahmp/module_sf_noahmplsm.F90
* fix additional warnings
* Fix compile hafsw wcoss2
* Revert rascnv so control_ras_intel b4b on wcoss2
* remove whitespace changes in radiation_clouds.f
---------
Co-authored-by: Grant Firl <grant.firl@noaa.gov>
Co-authored-by: VanderleiVargas-NOAA <vanderlei.vargas@noaa.gov>
Co-authored-by: Qingfu Liu <Qingfu.Liu@noaa.gov>
Co-authored-by: Clara.Draoper-NOAA <clara.draper@noaa.gov>
Co-authored-by: Michael Kavulich, Jr <kavulich@ucar.edu>
Co-authored-by: Lisa <lisa.bengtsson@noaa.gov>
Co-authored-by: Nicholas Szapiro <149816583+NickSzapiro-NOAA@users.noreply.github.com>
Co-authored-by: Rhae Sung Kim <rhaesung.kim@noaa.gov>
Co-authored-by: Nick Szapiro <nick.szapiro@noaa.gov>
Co-authored-by: Nick Szapiro <nick.szapiro@clogin06.cactus.wcoss2.ncep.noaa.gov>
Co-authored-by: Grant Firl <grant@Macbook-Air-M4.local>
* ufs-dev PR#371 (NCAR#1224)
* update standard names to move Xgrs to physics_timestep_initial* and remove *_of_new_state (default name refers to 'current' value)
* fix a few unchanged standard names
* change some timestep_initial variables to general variables; make satmedmfvdifq return new tendencies and new tendency application block in GFS_PBL_generic_post
* Refactor physics tendency calculations
- Added tendency variables (`ten_t`, `ten_u`, `ten_v`) for temperature and wind tendencies in SAMF deep and shallow convection schemes.
- Updated relevant `.meta` files to reflect changes in variable intent (`inout` -> `in` where appropriate) and added tendencies.
- Modified Interstitials (`GFS_DCNV_generic_post`, `GFS_DCNV_generic_pre`, `GFS_SCNV_generic_post`, `GFS_SCNV_generic_pre`) to directly use tendencies instead of saved state variables.
- Removed redundant saved variables (`save_u`, `save_v`, `save_t`).
- Added `delt` to post interstitials.
* update unified_ugwp, ugwpv1, and drag_suite to use new tendency code
* save tendency work with GFS_photochemistry
* add tracer tendency changes to convection; fix typos in GFS_photochemistry
* fix typo in samfdeepcnv.f
* save tendency work with Thompson MP
* save tendency work with radiation
* add FMS to ccpp-physics CMakeLists.txt for fv3
* add initial setting of state in GFS_time_vary_pre.fv3; fix horizontal_dimension in GFS_time_vary_pre.scm
* fix metadata in GFS_time_vary_pre.fv3
* add momentum tendency output to mp_thompson and fix intent in metadata
* fix array size bug in mp_thompson.F90; cleanup dtend code using new tendency paradigm; cleanup saving of states no longer needed
* fix improperly-merged conflict resolution in GFS_photochemistry.F90
* fix access of ntlnc/ntinc access of tracer array when missing
* convert many RAD, PBL, GWD, CONV, and MP schemes to return tendencies
* convert MG micro and Arakawa-Wu adjustment schemes
* convert MYNNEDMF PBL scheme to return tendencies
* add changes to MYNN EDMF PBL
* add back divide-by-zero bugfix in module_sf_noahmp_glacier.F90 that was removed recently
* remove obsolete interstitial schemes
* fix 2 minor compilation issues after testing with UFS RTs
* fix bug in MG MP
* fix near-surface air temperature standard name in GFS_surface_composites_pre
* apply tendency cleanup to GFDLMPv3 and TEMPO
* fix compilation error
* fix typo in TEMPO
* debug sgscloud_radpre/post
* remove tendency application code from rrtmg_lw/sw_post
* change thmpsn to thompson to fix compilation error
* fix compilation errors in GFS_radiation_post.F90
* remove Zhao-Carr cloud schemes and combine Xu-Randall cloud fraction calculations
* fix array size problem in cs_conv.F90
* refactor RAS tendencies
* fix compilation error in rascnv.F90
* change Xu-Randall cloud fraction scheme to be elemental
* Fixed too-high lower bound for SMC
Deleted code associated with already removed print statements
Deleted excess comments.
* use new cld_frac_XuRandall function from module_radiation_clouds in RRTMGP scheme
* Tidy-up for PR.
* modify the cld_frac_XuRandall function call in RRTMGP scheme
* Changes to the post L-IAU checks:
* Change tfreeze to match that in NoahMP
* Only set SLC to SMC if temp newly > tfreez
* add the repository update to this PR
* Revert "add the repository update to this PR"
This reverts commit 565d62c.
* fix bug in GFDLMPv3 tendency implementation
* remove the printing tests
* remove Zhao-Carr schemes from modules in the UFS_SCM_NEPTUNE directory
* remove Zhao-Carr microphysics scheme from physics/MP directory
* fix hail tendency changes from reviewer suggestions
* fix indexing bug in cu_tiedtke caught in code review
* changes to RAS tendency application update code from code review
* check for flag_for_generic_tendency_due_to_gravity_wave_drag before computing diagnostic tendencies in drag_suite
* fix diagnostic tendency bug in physics/GWD/ugwpv1_gsldrag.F90
* remove unused arguments in physics/GWD/ugwpv1_gsldrag_post.F90
* fix tendency diagnostics in physics/GWD/unified_ugwp.F90
* fix merge problem in mp_thompson.meta
* add arguments to drag_suite_run called outside of ccpp entry point
* initialize dclw variables in cu_ntiedtke
* fix loop bounds for ten_q in cu_gf_driver.F90
* fix loop bounds in cu_c3_driver
* fix new_q typo in mp_fer_hires.F90
* deallocate locally-allocated variables in MP schemes
* update zeroing logic in m_micro_post after review
* Update for 10m wind option in fire_behavior module
* remove non-ASCII character in canopy_levs.F90 (from previous PR)
* Updates to progomega option of saSAS convection scheme
* Correction
* correction 2
* fix line in SHOC where a tracer was being updated directly
* remove old_ozone array since it was not being used
* deallocate local variables in satmedmfvdifq at end of run phase
* save temperature before modification to pass in to diagnostics in GFS_radiation_post
* Remove goto in physics/MP/Morrison_Gettelman/aer_cloud.F
* Remove goto in physics/Radiation/radiation_clouds.f
* fix diagnostic temp tendency in GFS_MP_generic.F90 for when radar is/isn't available
* Correct parameter setting in samfshalcnv to pass debug runs
* Name END DO
* Remove goto physics/MP/calpreciptype.f90
* Remove goto physics/MP/Morrison_Gettelman/cldwat2m_micro.F
* Start goto physics/SFC_Models/Land/RUC/module_sf_ruclsm.F90
* Remove goto physics/SFC_Layer/UFS/module_nst_model.f90
* address saturation vapor pressure out of bounds error in hafs_4_nest RT
* update long names to remove 'updated by physics'; change prognostic updraft standard names
* remove additional references to Zhao-Carr microphysics
* remove Zhao-Carr references from GFS_scnv_generic_post
* fix deallocation statement in Thompson MP
* Remove go to physics/CONV/C3/cu_c3_sh.F90
* Remove go to physics/PBL/MYJ/module_BL_MYJPBL.F90
* Remove goto physics/MP/Morrison_Gettelman/wv_saturation.F
* Again physics/MP/Morrison_Gettelman/wv_saturation.F
* physics/MP/Morrison_Gettelman/wv_saturation.F
* Typo
* Remove goto physics/CONV/C3/cu_c3_deep.F90
* Remove go to physics/CONV/RAS/rascnv.F90
* Typo rascnv.F90
* physics/SFC_Layer/GFDL/gfdl_sfc_layer.F90
* physics/CONV/Grell_Freitas/cu_gf_sh.F90
* Typo module_BL_MYJPBL.F90
* physics/SFC_Layer/MYJ/module_SF_JSFC.F90
* First pass physics/CONV/Grell_Freitas/cu_gf_deep.F90
* physics/CONV/Grell_Freitas/cu_gf_deep.F90
* physics/GWD/ugwp_driver_v0.F
* physics/MP/Thompson/module_mp_thompson.F90
* physics/PBL/MYNN_EDMF/module_bl_mynn.F90
* physics/MP/GFDL/v1_2019/gfdl_cloud_microphys_mod.F90
* physics/MP/GFDL/v3_2022/gfdl_cloud_microphys_v3_mod.F90
* Fix compile physics/Radiation/radiation_clouds.f
* Compile fixes
* Fix for 73 character limit line
* Compile fix
* Start physics/SFC_Models/Land/RUC/module_sf_ruclsm.F90
* physics/SFC_Models/Land/Noahmp/module_sf_noahmplsm.F90
* fix additional warnings
* Fix compile hafsw wcoss2
* Revert rascnv so control_ras_intel b4b on wcoss2
* Use 10-m intepolated winds in the explicit in-canopy diffusion of tracers. Remove hpbl/kpbl update due to explicit in-canopy diffusion.
* Clean up commented out code. Correct a truncated source line.
* Comment out the integrated-canopy meteorology effect. Keep the lines for future PR with the canopy met effects.
* revert radiation_clouds.f
---------
Co-authored-by: Grant Firl <grant.firl@noaa.gov>
Co-authored-by: VanderleiVargas-NOAA <vanderlei.vargas@noaa.gov>
Co-authored-by: Qingfu Liu <Qingfu.Liu@noaa.gov>
Co-authored-by: Clara.Draoper-NOAA <clara.draper@noaa.gov>
Co-authored-by: Michael Kavulich, Jr <kavulich@ucar.edu>
Co-authored-by: Lisa <lisa.bengtsson@noaa.gov>
Co-authored-by: Nicholas Szapiro <149816583+NickSzapiro-NOAA@users.noreply.github.com>
Co-authored-by: Rhae Sung Kim <rhaesung.kim@noaa.gov>
Co-authored-by: Nick Szapiro <nick.szapiro@noaa.gov>
Co-authored-by: Nick Szapiro <nick.szapiro@clogin06.cactus.wcoss2.ncep.noaa.gov>
Co-authored-by: iri01 <i.t.ivanova@gmail.com>
Co-authored-by: iri01 <129897017+iri01@users.noreply.github.com>
Co-authored-by: Grant Firl <grant@Macbook-Air-M4.local>
Co-authored-by: Tracy <hertneky@ucar.edu>
* ufs-dev PR#365 (NCAR#1225)
* update standard names to move Xgrs to physics_timestep_initial* and remove *_of_new_state (default name refers to 'current' value)
* fix a few unchanged standard names
* change some timestep_initial variables to general variables; make satmedmfvdifq return new tendencies and new tendency application block in GFS_PBL_generic_post
* Refactor physics tendency calculations
- Added tendency variables (`ten_t`, `ten_u`, `ten_v`) for temperature and wind tendencies in SAMF deep and shallow convection schemes.
- Updated relevant `.meta` files to reflect changes in variable intent (`inout` -> `in` where appropriate) and added tendencies.
- Modified Interstitials (`GFS_DCNV_generic_post`, `GFS_DCNV_generic_pre`, `GFS_SCNV_generic_post`, `GFS_SCNV_generic_pre`) to directly use tendencies instead of saved state variables.
- Removed redundant saved variables (`save_u`, `save_v`, `save_t`).
- Added `delt` to post interstitials.
* update unified_ugwp, ugwpv1, and drag_suite to use new tendency code
* save tendency work with GFS_photochemistry
* add tracer tendency changes to convection; fix typos in GFS_photochemistry
* fix typo in samfdeepcnv.f
* save tendency work with Thompson MP
* save tendency work with radiation
* add FMS to ccpp-physics CMakeLists.txt for fv3
* add initial setting of state in GFS_time_vary_pre.fv3; fix horizontal_dimension in GFS_time_vary_pre.scm
* fix metadata in GFS_time_vary_pre.fv3
* add momentum tendency output to mp_thompson and fix intent in metadata
* fix array size bug in mp_thompson.F90; cleanup dtend code using new tendency paradigm; cleanup saving of states no longer needed
* fix improperly-merged conflict resolution in GFS_photochemistry.F90
* fix access of ntlnc/ntinc access of tracer array when missing
* convert many RAD, PBL, GWD, CONV, and MP schemes to return tendencies
* convert MG micro and Arakawa-Wu adjustment schemes
* convert MYNNEDMF PBL scheme to return tendencies
* add changes to MYNN EDMF PBL
* add back divide-by-zero bugfix in module_sf_noahmp_glacier.F90 that was removed recently
* remove obsolete interstitial schemes
* fix 2 minor compilation issues after testing with UFS RTs
* fix bug in MG MP
* fix near-surface air temperature standard name in GFS_surface_composites_pre
* apply tendency cleanup to GFDLMPv3 and TEMPO
* fix compilation error
* fix typo in TEMPO
* debug sgscloud_radpre/post
* remove tendency application code from rrtmg_lw/sw_post
* change thmpsn to thompson to fix compilation error
* fix compilation errors in GFS_radiation_post.F90
* remove Zhao-Carr cloud schemes and combine Xu-Randall cloud fraction calculations
* fix array size problem in cs_conv.F90
* refactor RAS tendencies
* fix compilation error in rascnv.F90
* change Xu-Randall cloud fraction scheme to be elemental
* Fixed too-high lower bound for SMC
Deleted code associated with already removed print statements
Deleted excess comments.
* use new cld_frac_XuRandall function from module_radiation_clouds in RRTMGP scheme
* Tidy-up for PR.
* modify the cld_frac_XuRandall function call in RRTMGP scheme
* Changes to the post L-IAU checks:
* Change tfreeze to match that in NoahMP
* Only set SLC to SMC if temp newly > tfreez
* add the repository update to this PR
* Revert "add the repository update to this PR"
This reverts commit 565d62c.
* fix bug in GFDLMPv3 tendency implementation
* remove the printing tests
* remove Zhao-Carr schemes from modules in the UFS_SCM_NEPTUNE directory
* remove Zhao-Carr microphysics scheme from physics/MP directory
* Chagne to not using ozone physics DDT when not active
* fix hail tendency changes from reviewer suggestions
* fix indexing bug in cu_tiedtke caught in code review
* changes to RAS tendency application update code from code review
* check for flag_for_generic_tendency_due_to_gravity_wave_drag before computing diagnostic tendencies in drag_suite
* fix diagnostic tendency bug in physics/GWD/ugwpv1_gsldrag.F90
* remove unused arguments in physics/GWD/ugwpv1_gsldrag_post.F90
* fix tendency diagnostics in physics/GWD/unified_ugwp.F90
* fix merge problem in mp_thompson.meta
* add arguments to drag_suite_run called outside of ccpp entry point
* initialize dclw variables in cu_ntiedtke
* fix loop bounds for ten_q in cu_gf_driver.F90
* fix loop bounds in cu_c3_driver
* fix new_q typo in mp_fer_hires.F90
* deallocate locally-allocated variables in MP schemes
* update zeroing logic in m_micro_post after review
* Update for 10m wind option in fire_behavior module
* remove non-ASCII character in canopy_levs.F90 (from previous PR)
* Updates to progomega option of saSAS convection scheme
* Correction
* correction 2
* fix line in SHOC where a tracer was being updated directly
* remove old_ozone array since it was not being used
* deallocate local variables in satmedmfvdifq at end of run phase
* save temperature before modification to pass in to diagnostics in GFS_radiation_post
* Remove goto in physics/MP/Morrison_Gettelman/aer_cloud.F
* Remove goto in physics/Radiation/radiation_clouds.f
* fix diagnostic temp tendency in GFS_MP_generic.F90 for when radar is/isn't available
* Correct parameter setting in samfshalcnv to pass debug runs
* Name END DO
* Remove goto physics/MP/calpreciptype.f90
* Remove goto physics/MP/Morrison_Gettelman/cldwat2m_micro.F
* Start goto physics/SFC_Models/Land/RUC/module_sf_ruclsm.F90
* Remove goto physics/SFC_Layer/UFS/module_nst_model.f90
* address saturation vapor pressure out of bounds error in hafs_4_nest RT
* update long names to remove 'updated by physics'; change prognostic updraft standard names
* remove additional references to Zhao-Carr microphysics
* remove Zhao-Carr references from GFS_scnv_generic_post
* fix deallocation statement in Thompson MP
* Remove go to physics/CONV/C3/cu_c3_sh.F90
* Remove go to physics/PBL/MYJ/module_BL_MYJPBL.F90
* Remove goto physics/MP/Morrison_Gettelman/wv_saturation.F
* Again physics/MP/Morrison_Gettelman/wv_saturation.F
* physics/MP/Morrison_Gettelman/wv_saturation.F
* Typo
* Remove goto physics/CONV/C3/cu_c3_deep.F90
* Remove go to physics/CONV/RAS/rascnv.F90
* Typo rascnv.F90
* physics/SFC_Layer/GFDL/gfdl_sfc_layer.F90
* physics/CONV/Grell_Freitas/cu_gf_sh.F90
* Typo module_BL_MYJPBL.F90
* physics/SFC_Layer/MYJ/module_SF_JSFC.F90
* First pass physics/CONV/Grell_Freitas/cu_gf_deep.F90
* physics/CONV/Grell_Freitas/cu_gf_deep.F90
* physics/GWD/ugwp_driver_v0.F
* physics/MP/Thompson/module_mp_thompson.F90
* physics/PBL/MYNN_EDMF/module_bl_mynn.F90
* physics/MP/GFDL/v1_2019/gfdl_cloud_microphys_mod.F90
* physics/MP/GFDL/v3_2022/gfdl_cloud_microphys_v3_mod.F90
* Fix compile physics/Radiation/radiation_clouds.f
* Compile fixes
* Fix for 73 character limit line
* Compile fix
* Start physics/SFC_Models/Land/RUC/module_sf_ruclsm.F90
* physics/SFC_Models/Land/Noahmp/module_sf_noahmplsm.F90
* fix additional warnings
* Fix compile hafsw wcoss2
* Revert rascnv so control_ras_intel b4b on wcoss2
* Use 10-m intepolated winds in the explicit in-canopy diffusion of tracers. Remove hpbl/kpbl update due to explicit in-canopy diffusion.
* Clean up commented out code. Correct a truncated source line.
* Bug in gcycle error message
* Comment out the integrated-canopy meteorology effect. Keep the lines for future PR with the canopy met effects.
---------
Co-authored-by: Grant Firl <grant.firl@noaa.gov>
Co-authored-by: VanderleiVargas-NOAA <vanderlei.vargas@noaa.gov>
Co-authored-by: Qingfu Liu <Qingfu.Liu@noaa.gov>
Co-authored-by: Clara.Draoper-NOAA <clara.draper@noaa.gov>
Co-authored-by: Dustin Swales <dustin.swales@noaa.gov>
Co-authored-by: Michael Kavulich, Jr <kavulich@ucar.edu>
Co-authored-by: Lisa <lisa.bengtsson@noaa.gov>
Co-authored-by: Nicholas Szapiro <149816583+NickSzapiro-NOAA@users.noreply.github.com>
Co-authored-by: Rhae Sung Kim <rhaesung.kim@noaa.gov>
Co-authored-by: Nick Szapiro <nick.szapiro@noaa.gov>
Co-authored-by: Nick Szapiro <nick.szapiro@clogin06.cactus.wcoss2.ncep.noaa.gov>
Co-authored-by: iri01 <i.t.ivanova@gmail.com>
Co-authored-by: iri01 <129897017+iri01@users.noreply.github.com>
Co-authored-by: Grant Firl <grant@Macbook-Air-M4.local>
Co-authored-by: Tracy <hertneky@ucar.edu>
* copy fix from FV3 version to SCM version of GFS_phys_time_vary (NCAR#1227)
* UGWP_v0: Scale cdmbgwd(1:2) by inverse square root of dx (NCAR#1218)
* GW multiplication factors scaled by inverse square root of dx (#82)
* Scale cdmb with the inverse square root of dxres in ugwp_v0
* Scale cleff with the inverse square root of dxres in ugwp_v0
* Replace the non-ascii 1/2 with its ascii representation to satisfy ci
test requirement.
* Unify cdmbgwd0 and cdmbgwd (#83)
* Make cdmbgwd0 to be rank 4
* Unify cdmbgwd0 and cdmbgwd
* Remove unnecessary line
* Multiply coefficients by a power of 10
* add Alex and Matus as codeowners for ugwp_v0
---------
Co-authored-by: Matus Martini <matus.n.martini.ctr@us.navy.mil>
Co-authored-by: Grant Firl <grant.firl@noaa.gov>
* New SciDocs for GWv1 release and LandDA capability (NCAR#1226)
* add doxygen action
* minor changes
* minor changes
* minor changes
* doxy only
* Create main.yml
* Create jekyll-gh-pages.yml
* change
* add doxyfile into wkfl
* Update doxygen.yml
* Update doxygen.yml
* Update doxygen.yml
* Update doxygen.yml
* Update doxygen.yml
* Update doxygen.yml
* Update doxygen.yml
* Update doxygen.yml
* Update doxygen.yml
* Update doxygen.yml
* Update doxygen.yml
* Update doxygen.yml
* Update ccpp_doxyfile
* Update ccpp_doxyfile
* update ccpp doxyfile
* Update doxygen.yml
* update doxyfile
* Update doxygen.yml
* Update doxygen.yml
* update doxyfile
* Update doxygen.yml
* Update doxygen.yml
* Update doxygen.yml
* Update doxygen.yml
* Update doxygen.yml
* Update doxygen.yml
* Update doxygen.yml
* Update doxygen.yml
* Update doxygen.yml
* Update doxygen.yml
* Update doxygen.yml
* Update doxygen.yml
* Update doxygen.yml
* Update doxygen.yml
* Update doxygen.yml
* Update doxygen.yml
* Update doxygen.yml
* Update doxygen.yml
* Update doxygen.yml
* Update doxygen.yml
* Update doxygen.yml
* Update doxygen.yml
* Update doxygen.yml
* Update doxygen.yml
* change path
* add mactex
* add mactex
* minor changes
* minor fix
* try1
* try1
* try2
* updates
* update perl
* update perl
* update path
* explicitly install
* updates
* updates
* fix
* fix path
* fix
* fix path
* fixes
* fix3
* cleanup
* restore yml files
* hsd updates
* add doxygen.yml
* update branch
* update wflw
* test
* fix
* fix
* fix
* fix
* rearrange steps
* oops
* .
* debug
* chng dir
* chng dir
* chng dir
* -landing page
* -update para
* try to add a backlink, fix typo
* fix css link
* link path
* try cp stylesheet
* Add CCPP website
* fix
* add SRW build, backlink
* try mainpage
* changes for mainpage
* mainpage config
* mainpage config
* mainpage config
* mainpage debug
* mainpage debug
* mainpage debug
* mainpage debug
* mainpage debug
* fix landing page sidebar.
* fix landing page sidebar.
* fix landing page sidebar.
* fix landing page sidebar.
* style updates
* mainpage style
* mainpage style
* hide tree on mainpage
* add back tree
* try adding backlink
* add backlink to other pages
* updates migrated from mzhangw
* fix missed conflicts
* fix syntax
* run workflow on this branch
* remove branch from workflow run, update doxyfile
* mods to mainpag dxy
* updates
* try update for v7 arg table
* turn on scidoc branch for deploy
* recurse checkout
* fix directory
* try fix
* update landing page with acknowledgements
* fix path
* fix path
* debug
* add prebuild_config for building tables
* fix
* debug
* debug
* restructure workflow to work with metadata2html.py
* add remaining prebuild configs
* attempt fix srwv3 checkout
* fix main checkout for landing page, stash prebuild configs
* fix syntax
* update prebuild location
* workflow updates
* point to NCAR/main
* initial landDA sciDoc commits
* point to fork for testing
* point to fork for testing in 1 more place
* add sciDocs for GW release, some reorg
* point to fork
* remove main
* Changes to GW mainpage
* try fix
* fix!
* fix few things
* Add nml links
* fix land DA overview page
* fixes
* oops
* oops
* updates to GFS_ugwpv1 from Michael Toy and Bo Yang
* updates to SAMFdeep from Lisa Bengtsson
* updates from Jongil Han for convective, sfc, pbl schemes
* Update SciDoc link on README
* updates for H2O/Ozone schemes from Qingfu Lui
* fix sfclyr link
* update reference
* try bib fix
* try bib tweak
* trying to get ref to work
* fix bib links
* updates for RRTMG from Qingfu Lui
* update tracy-fork > main for merging into NCAR/main
---------
Co-authored-by: mzhangw <man.zhang@noaa.gov>
Co-authored-by: mzhangw <mzhangw@gmail.com>
Co-authored-by: Grant Firl <grant.firl@noaa.gov>
* run on upstream only since deploy will fail when run from forks (NCAR#1229)
Co-authored-by: Grant Firl <grant.firl@noaa.gov>
* ufs-dev PR#373 (NCAR#1228)
* remove old C3 directory
* add C3 as a submodule in a standalone repository
* add cu_c3_driver.meta into C3 repository to hook up with CCPP
* C3 refactoring - create new CCPP-facing interface compatible with new shared MPAS code. Move to stand alone submodule
* Remove non ascii charachters that ccpp doesn't like
* translate some comments from Portuguese to English as ccpp doesn't like the ascii format
* translate some comments from Portuguese to English as ccpp doesn't like the ascii format 2
* translate some comments from Portuguese to English as ccpp doesn't like the ascii format 3
* more ascii symbols correction
* non-ascii charachters
* Add host driver directories inside the C3 submodule and rename driver to have suffix _ccpp and _mpas respectively
* Add mod_cu_kinds module for consistent kind_phys handling
* Fix C3 CCPP plume postprocessing consistency and add neg_check to ensure moisture conservation
* Minor updates to avoid compiler warnings associated with subten-variables
* Address typos in meta files according to review comments
* Correct typo from host model causing inconsistent prebuild
* Update C3 commit to 4a41088 and update .gitmodules
---------
Co-authored-by: Lisa <lisa.bengtsson@noaa.gov>
* number_of_openmp_threads --> number_of_physics_threads
* Update submodule pointer for C3
* Add optional attribute for tke vars in cires_ugwp
* Bug fix in physics/GWD/cires_ugwp.meta
* Add back in metadata file changes that were lost?
* Remove changes accidentally intrioduced
* Remove changes accidentally intrioduced
* Remove cmakelists. Not used
* Remove commented line
* Updates for TEMPO changes
* One more TEMPO change
* Update submodule name in .gitmodules. Not impactful sice path os set correctly, but still inconsistent.
* Update physics submodules
---------
Co-authored-by: Tracy <hertneky@ucar.edu>
Co-authored-by: Grant Firl <grant.firl@noaa.gov>
Co-authored-by: Soren Rasmussen <s.c.rasmussen@gmail.com>
Co-authored-by: Dom Heinzeller <dom.heinzeller@icloud.com>
Co-authored-by: Tracy Hertneky <39317287+hertneky@users.noreply.github.com>
Co-authored-by: mzhangw <man.zhang@noaa.gov>
Co-authored-by: mzhangw <mzhangw@gmail.com>
Co-authored-by: Qingfu Liu <Qingfu.Liu@noaa.gov>
Co-authored-by: Matus Martini <matusmartini@users.noreply.github.com>
Co-authored-by: Clara.Draoper-NOAA <clara.draper@noaa.gov>
Co-authored-by: Michael Kavulich, Jr <kavulich@ucar.edu>
Co-authored-by: Lisa <lisa.bengtsson@noaa.gov>
Co-authored-by: Rhae Sung Kim <rhaesung.kim@noaa.gov>
Co-authored-by: dustinswales <dswales@ucar.edu>
Co-authored-by: VanderleiVargas-NOAA <vanderlei.vargas@noaa.gov>
Co-authored-by: Grant Firl <grant@Macbook-Air-M4.local>
Co-authored-by: Nicholas Szapiro <149816583+NickSzapiro-NOAA@users.noreply.github.com>
Co-authored-by: Nick Szapiro <nick.szapiro@noaa.gov>
Co-authored-by: Nick Szapiro <nick.szapiro@clogin06.cactus.wcoss2.ncep.noaa.gov>
Co-authored-by: iri01 <i.t.ivanova@gmail.com>
Co-authored-by: iri01 <129897017+iri01@users.noreply.github.com>
Co-authored-by: Matus Martini <matus.n.martini.ctr@us.navy.mil>1 parent 8ac9c2e commit 5ef5adc
86 files changed
Lines changed: 638 additions & 3218 deletions
File tree
- physics
- CONV
- GWD
- Interstitials/UFS_SCM_NEPTUNE
- MP
- Ferrier_Aligo
- GFDL
- v1_2019
- v3_2022
- NSSL
- TEMPO
- Thompson
- PBL/SATMEDMF
- Radiation
- RRTMGP
- RRTMG
- SFC_Layer/UFS
- SFC_Models
- Lake/Flake
- Land
- Noahmp
- Noah
- RUC
- hooks
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31 | 31 | | |
32 | 32 | | |
33 | | - | |
| 33 | + | |
34 | 34 | | |
35 | 35 | | |
36 | 36 | | |
| |||
| Original file line number | Diff line number | Diff line change | |
|---|---|---|---|
| |||
7 | 7 | | |
8 | 8 | | |
9 | 9 | | |
10 | | - | |
| 10 | + | |
11 | 11 | | |
12 | 12 | | |
13 | 13 | | |
| |||
| Original file line number | Diff line number | Diff line change | |
|---|---|---|---|
| |||
16 | 16 | | |
17 | 17 | | |
18 | 18 | | |
19 | | - | |
| 19 | + | |
20 | 20 | | |
21 | 21 | | |
22 | 22 | | |
| |||
25 | 25 | | |
26 | 26 | | |
27 | 27 | | |
28 | | - | |
| 28 | + | |
29 | 29 | | |
30 | 30 | | |
31 | 31 | | |
| |||
103 | 103 | | |
104 | 104 | | |
105 | 105 | | |
106 | | - | |
| 106 | + | |
107 | 107 | | |
108 | 108 | | |
109 | 109 | | |
110 | 110 | | |
111 | | - | |
112 | | - | |
| 111 | + | |
| 112 | + | |
113 | 113 | | |
114 | 114 | | |
115 | | - | |
| 115 | + | |
116 | 116 | | |
117 | 117 | | |
118 | 118 | | |
| |||
125 | 125 | | |
126 | 126 | | |
127 | 127 | | |
128 | | - | |
| 128 | + | |
129 | 129 | | |
130 | 130 | | |
131 | 131 | | |
132 | | - | |
| 132 | + | |
133 | 133 | | |
134 | 134 | | |
135 | 135 | | |
| |||
244 | 244 | | |
245 | 245 | | |
246 | 246 | | |
247 | | - | |
| 247 | + | |
248 | 248 | | |
249 | 249 | | |
250 | 250 | | |
| |||
| Original file line number | Diff line number | Diff line change | |
|---|---|---|---|
| |||
163 | 163 | | |
164 | 164 | | |
165 | 165 | | |
166 | | - | |
| 166 | + | |
167 | 167 | | |
168 | 168 | | |
169 | 169 | | |
| |||
791 | 791 | | |
792 | 792 | | |
793 | 793 | | |
| 794 | + | |
794 | 795 | | |
795 | 796 | | |
796 | 797 | | |
| |||
799 | 800 | | |
800 | 801 | | |
801 | 802 | | |
| 803 | + | |
802 | 804 | | |
803 | 805 | | |
804 | 806 | | |
| |||
| Original file line number | Diff line number | Diff line change | |
|---|---|---|---|
| |||
71 | 71 | | |
72 | 72 | | |
73 | 73 | | |
74 | | - | |
| 74 | + | |
75 | 75 | | |
76 | 76 | | |
77 | 77 | | |
| |||
227 | 227 | | |
228 | 228 | | |
229 | 229 | | |
230 | | - | |
| 230 | + | |
231 | 231 | | |
232 | 232 | | |
233 | 233 | | |
234 | | - | |
| 234 | + | |
235 | 235 | | |
236 | 236 | | |
237 | 237 | | |
| |||
245 | 245 | | |
246 | 246 | | |
247 | 247 | | |
248 | | - | |
| 248 | + | |
249 | 249 | | |
| Original file line number | Diff line number | Diff line change | |
|---|---|---|---|
| |||
92 | 92 | | |
93 | 93 | | |
94 | 94 | | |
95 | | - | |
| 95 | + | |
96 | 96 | | |
97 | 97 | | |
98 | 98 | | |
| |||
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