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Copy pathMakefile
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76 lines (46 loc) · 1.97 KB
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CC = g++ -std=c++17
CFLAGS = -O3 -Wall -Wextra -Wunused -fopenmp -Wl,--as-needed
CFLAGS = -static -O3 -Wall -Wextra -Wunused -fopenmp -Wl,--as-needed
ZBASE=./zbase
LIBSO= -lgomp -lm
LIBS= -lboost_system -lboost_thread -lboost_program_options -lboost_timer -lboost_chrono -Bdynamic -lgsl -lgslcblas
LIBSO= -static-libstdc++ -static-libgcc -lgomp -lm
LIBS= -lboost_system -lboost_thread -lboost_program_options -lboost_timer -lboost_chrono -Bdynamic -lgsl -lgslcblas
LIBPATH= $(ZBASE)/lib
DEPS =
INCLUDES = -I$(ZBASE)
OBJ = genpfsa lsmash llk llk_yi prun prunX drawpfsa pfsadyn2param computepfsadistance
all: $(OBJ) clear mvbin
# compile binaries --------------------------------
%.o : %.cc
$(CC) $(INCLUDES) -c -o $@ $< $(CFLAGS)
lsmash: lsmash.o
$(CC) $(CFLAGS) -o $@ $^ -L$(LIBPATH) -lsemcrct -lconfigfile $(LIBSO) $(LIBS)
genpfsa: genpfsa.o
$(CC) $(CFLAGS) -o $@ $^ -L$(LIBPATH) -lsemcrct -lconfigfile $(LIBSO) $(LIBS)
llk: llk.o
$(CC) $(CFLAGS) -o $@ $^ -L$(LIBPATH) -lsemcrct -lconfigfile $(LIBSO) $(LIBS)
llk_yi: llk_yi.o
$(CC) $(CFLAGS) -o $@ $^ -L$(LIBPATH) -lsemcrct -lconfigfile $(LIBSO) $(LIBS)
prun: prun.o
$(CC) $(CFLAGS) -o $@ $^ -L$(LIBPATH) -lsemcrct -lconfigfile $(LIBSO) $(LIBS)
drawpfsa: drawpfsa.o
$(CC) $(CFLAGS) -o $@ $^ -L$(LIBPATH) -lsemcrct -lconfigfile $(LIBSO) $(LIBS)
prunX: prunX.o
$(CC) $(CFLAGS) -o $@ $^ -L$(LIBPATH) -lsemcrct -lconfigfile $(LIBSO) $(LIBS)
pfsadyn2param: pfsadyn2param.o
$(CC) $(CFLAGS) -o $@ $^ -L$(LIBPATH) -lsemcrct -lconfigfile $(LIBSO) $(LIBS)
computepfsadistance: computepfsadistance.o
$(CC) $(CFLAGS) -o $@ $^ -L$(LIBPATH) -lsemcrct -lconfigfile $(LIBSO) $(LIBS)
# utility commands --------------------------------
clear:
rm -rf *.o
clean:
rm -rf *.o *~ $(OBJ) *.tgz
mvbin:
rm -rf ./bin >&/dev/null; mkdir bin; mv $(OBJ) ./bin
src:
tar -czvf src.tgz *.cc *.h Makefile Doxyfile
ref:
doxygen Doxyfile; cd doc/latex; make; make
# EOF --------------------------------