- mode:
helical - status:
PASS - assessment report:
C:\Users\Zhane\Documents\New project\zrt-bionemo\outputs\protein_loop_assessment_report.json - verification report:
C:\Users\Zhane\Documents\New project\zrt-bionemo\outputs\protein_loop_verification_report.json - reproducibility report:
C:\Users\Zhane\Documents\New project\zrt-bionemo\outputs\protein_loop_repro_check_report.json - bootstrap report:
C:\Users\Zhane\Documents\New project\zrt-bionemo\outputs\protein_loop_bootstrap_report.json
- verification:
PASS - reproducibility:
PASS - next rule:
exploit-neff - run index pair:
33->34
- msa neff pair:
10.821770976485611->10.92725466443204 - paired neff pair:
10.587433779538275->10.706898051196486 - temperature pair:
0.2059->0.1956 - diversity pair:
0.7104->0.6394 - neighbor pair:
0.89->0.9
- summary:
C:\Users\Zhane\Documents\New project\zrt-bionemo\outputs\protein_loop_run_summary.json - run review:
C:\Users\Zhane\Documents\New project\zrt-bionemo\outputs\openfold3_run_review.md - session index:
C:\Users\Zhane\Documents\New project\zrt-bionemo\protein_loop_session_index.md - runbook:
C:\Users\Zhane\Documents\New project\zrt-bionemo\protein_loop_runbook.md - evidence matrix:
C:\Users\Zhane\Documents\New project\zrt-bionemo\protein_loop_evidence_matrix.md
MOCK/DEMOonly- local-first
- reproducible
- no claims of biological truth without verification