Skip to content

1deg_jra55_ryf: test MOM5 spack-package changes #186

New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Closed
dougiesquire wants to merge 4 commits into from
Closed

1deg_jra55_ryf: test MOM5 spack-package changes #186

Show file tree
Hide file tree
Changes from all commits
Commits
Show all changes
4 commits
Select commit Hold shift + click to select a range
773a1f8
Use prerelease access-om2/pr102-2
dougiesquire Apr 16, 2025
8683da5
Use prerelease access-om2/pr102-3
dougiesquire Apr 17, 2025
9981ca6
Use prerelease access-om2/pr102-4
dougiesquire Apr 21, 2025
a8b80e7
Use prerelease access-om2/pr102-5
dougiesquire Apr 23, 2025
File filter

Filter by extension

Filter by extension
Conversations
Failed to load comments.
Loading
Jump to
Jump to file
Failed to load files.
Loading
Diff view
Diff view
66 changes: 36 additions & 30 deletions config.yaml
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -19,52 +19,58 @@ sync:
path: null # Set to location on /g/data or a remote server and path (rsync syntax)

# Model configuration
modules:
use:
- /g/data/vk83/prerelease/modules
load:
- access-om2/pr102-5

name: common
model: access-om2
input:
- /g/data/vk83/experiments/inputs/access-om2/remapping_weights/JRA55/global.1deg/2020.05.30/JRA55_MOM1_conserve2nd.nc
- /g/data/vk83/experiments/inputs/access-om2/remapping_weights/JRA55/global.1deg/2020.05.30/JRA55_MOM1_patch.nc
- /g/data/vk83/experiments/inputs/access-om2/remapping_weights/JRA55/global.1deg/2020.05.30/rmp_jra55_cice_1st_conserve.nc
- /g/data/vk83/experiments/inputs/access-om2/remapping_weights/JRA55/global.1deg/2020.05.30/rmp_jra55_cice_2nd_conserve.nc
- /g/data/vk83/experiments/inputs/access-om2/remapping_weights/JRA55/global.1deg/2020.05.30/rmp_jra55_cice_patch.nc
- /g/data/vk83/configurations/inputs/access-om2/remapping_weights/JRA55/global.1deg/2020.05.30/JRA55_MOM1_conserve2nd.nc
- /g/data/vk83/configurations/inputs/access-om2/remapping_weights/JRA55/global.1deg/2020.05.30/JRA55_MOM1_patch.nc
- /g/data/vk83/configurations/inputs/access-om2/remapping_weights/JRA55/global.1deg/2020.05.30/rmp_jra55_cice_1st_conserve.nc
- /g/data/vk83/configurations/inputs/access-om2/remapping_weights/JRA55/global.1deg/2020.05.30/rmp_jra55_cice_2nd_conserve.nc
- /g/data/vk83/configurations/inputs/access-om2/remapping_weights/JRA55/global.1deg/2020.05.30/rmp_jra55_cice_patch.nc
submodels:
- name: atmosphere
model: yatm
exe: /g/data/vk83/apps/spack/0.20/release/linux-rocky8-x86_64/intel-19.0.5.281/libaccessom2-git.2023.10.26=2023.10.26-ltfg7jcn6t4cefotvj3kjnyu5nru26xo/bin/yatm.exe
exe: yatm.exe
input:
- /g/data/vk83/experiments/inputs/access-om2/remapping_weights/JRA55/global.1deg/2020.05.30/rmp_jrar_to_cict_CONSERV.nc
- /g/data/vk83/experiments/inputs/JRA-55/RYF/v1-4/data
- /g/data/vk83/configurations/inputs/access-om2/remapping_weights/JRA55/global.1deg/2020.05.30/rmp_jrar_to_cict_CONSERV.nc
- /g/data/vk83/configurations/inputs/JRA-55/RYF/v1-4/data
ncpus: 1

- name: ocean
model: mom
exe: /g/data/vk83/apps/spack/0.20/release/linux-rocky8-x86_64/intel-19.0.5.281/mom5-git.2023.11.09=2023.11.09-qji4nlmr6utrribaiyhewe4je6mifguz/bin/fms_ACCESS-OM.x
exe: fms_ACCESS-OM.x
input:
- /g/data/vk83/experiments/inputs/access-om2/ocean/grids/mosaic/global.1deg/2020.05.30/grid_spec.nc
- /g/data/vk83/experiments/inputs/access-om2/ocean/grids/mosaic/global.1deg/2020.05.30/ocean_hgrid.nc
- /g/data/vk83/experiments/inputs/access-om2/ocean/grids/mosaic/global.1deg/2020.05.30/ocean_mosaic.nc
- /g/data/vk83/experiments/inputs/access-om2/ocean/grids/bathymetry/global.1deg/2020.10.22/topog.nc
- /g/data/vk83/experiments/inputs/access-om2/ocean/grids/bathymetry/global.1deg/2020.10.22/ocean_mask.nc
- /g/data/vk83/experiments/inputs/access-om2/ocean/grids/vertical/global.1deg/2020.10.22/ocean_vgrid.nc
- /g/data/vk83/experiments/inputs/access-om2/ocean/processor_masks/global.1deg/216.16x15/2020.05.30/ocean_mask_table
- /g/data/vk83/experiments/inputs/access-om2/ocean/chlorophyll/global.1deg/2020.05.30/chl.nc
- /g/data/vk83/experiments/inputs/access-om2/ocean/initial_conditions/global.1deg/2020.10.22/ocean_temp_salt.res.nc
- /g/data/vk83/experiments/inputs/access-om2/ocean/tides/global.1deg/2020.05.30/tideamp.nc
- /g/data/vk83/experiments/inputs/access-om2/ocean/tides/global.1deg/2020.05.30/roughness_amp.nc
- /g/data/vk83/experiments/inputs/access-om2/ocean/tides/global.1deg/2020.05.30/roughness_cdbot.nc
- /g/data/vk83/experiments/inputs/access-om2/ocean/surface_salt_restoring/global.1deg/2020.05.30/salt_sfc_restore.nc
- /g/data/vk83/configurations/inputs/access-om2/ocean/grids/mosaic/global.1deg/2020.05.30/grid_spec.nc
- /g/data/vk83/configurations/inputs/access-om2/ocean/grids/mosaic/global.1deg/2020.05.30/ocean_hgrid.nc
- /g/data/vk83/configurations/inputs/access-om2/ocean/grids/mosaic/global.1deg/2020.05.30/ocean_mosaic.nc
- /g/data/vk83/configurations/inputs/access-om2/ocean/grids/bathymetry/global.1deg/2020.10.22/topog.nc
- /g/data/vk83/configurations/inputs/access-om2/ocean/grids/bathymetry/global.1deg/2020.10.22/ocean_mask.nc
- /g/data/vk83/configurations/inputs/access-om2/ocean/grids/vertical/global.1deg/2020.10.22/ocean_vgrid.nc
- /g/data/vk83/configurations/inputs/access-om2/ocean/processor_masks/global.1deg/216.16x15/2020.05.30/ocean_mask_table
- /g/data/vk83/configurations/inputs/access-om2/ocean/chlorophyll/global.1deg/2020.05.30/chl.nc
- /g/data/vk83/configurations/inputs/access-om2/ocean/initial_conditions/global.1deg/2020.10.22/ocean_temp_salt.res.nc
- /g/data/vk83/configurations/inputs/access-om2/ocean/tides/global.1deg/2020.05.30/tideamp.nc
- /g/data/vk83/configurations/inputs/access-om2/ocean/tides/global.1deg/2020.05.30/roughness_amp.nc
- /g/data/vk83/configurations/inputs/access-om2/ocean/tides/global.1deg/2020.05.30/roughness_cdbot.nc
- /g/data/vk83/configurations/inputs/access-om2/ocean/surface_salt_restoring/global.1deg/2020.05.30/salt_sfc_restore.nc
ncpus: 216

- name: ice
model: cice5
exe: /g/data/vk83/apps/spack/0.20/release/linux-rocky8-x86_64/intel-19.0.5.281/cice5-git.2023.10.19=2023.10.19-v3zncpqjj2gyseudbwiudolcjq3k3leo/bin/cice_auscom_360x300_24x1_24p.exe
exe: cice_auscom_360x300_24x1_24p.exe
input:
- /g/data/vk83/experiments/inputs/access-om2/ice/grids/global.1deg/2024.04.17/grid.nc
- /g/data/vk83/experiments/inputs/access-om2/ice/grids/global.1deg/2024.04.17/kmt.nc
- /g/data/vk83/experiments/inputs/access-om2/ice/initial_conditions/global.1deg/2020.05.30/i2o.nc
- /g/data/vk83/experiments/inputs/access-om2/ice/initial_conditions/global.1deg/2020.05.30/o2i.nc
- /g/data/vk83/experiments/inputs/access-om2/ice/initial_conditions/global.1deg/2020.05.30/u_star.nc
- /g/data/vk83/experiments/inputs/access-om2/ice/initial_conditions/global.1deg/2020.05.30/monthly_sstsss.nc
- /g/data/vk83/configurations/inputs/access-om2/ice/grids/global.1deg/2024.04.17/grid.nc
- /g/data/vk83/configurations/inputs/access-om2/ice/grids/global.1deg/2024.04.17/kmt.nc
- /g/data/vk83/configurations/inputs/access-om2/ice/initial_conditions/global.1deg/2020.05.30/i2o.nc
- /g/data/vk83/configurations/inputs/access-om2/ice/initial_conditions/global.1deg/2020.05.30/o2i.nc
- /g/data/vk83/configurations/inputs/access-om2/ice/initial_conditions/global.1deg/2020.05.30/u_star.nc
- /g/data/vk83/configurations/inputs/access-om2/ice/initial_conditions/global.1deg/2020.05.30/monthly_sstsss.nc
ncpus: 24

# Collation
Expand All @@ -74,7 +80,7 @@ collate:
mem: 30GB
ncpus: 4
queue: normal
exe: /g/data/vk83/apps/spack/0.20/release/linux-rocky8-x86_64/intel-19.0.5.281/mom5-git.2023.11.09=2023.11.09-qji4nlmr6utrribaiyhewe4je6mifguz/bin/mppnccombine.spack
exe: mppnccombine.spack

# Misc
runlog: true
Expand Down
18 changes: 9 additions & 9 deletions manifests/exe.yaml
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -2,17 +2,17 @@ format: yamanifest
version: 1.0
---
work/atmosphere/yatm.exe:
fullpath: /g/data/vk83/apps/spack/0.20/release/linux-rocky8-x86_64/intel-19.0.5.281/libaccessom2-git.2023.10.26=2023.10.26-ltfg7jcn6t4cefotvj3kjnyu5nru26xo/bin/yatm.exe
fullpath: /g/data/vk83/prerelease/apps/spack/0.22/release/linux-rocky8-x86_64/intel-19.0.5.281/libaccessom2-git.2023.10.26_access-om2-x7dud7bdjikzmharfzc5orm5jjlfanja/bin/yatm.exe
hashes:
binhash: 4e8b4ef76e971c4af3b26cfac632e160
md5: 5baa1d417fe6708fc30cbeaa57d82f96
binhash: bdc01f66fe3e78ffc140be76ed3223b0
md5: ed8e7783a5279a358fb7e24221e3e350
work/ice/cice_auscom_360x300_24x1_24p.exe:
fullpath: /g/data/vk83/apps/spack/0.20/release/linux-rocky8-x86_64/intel-19.0.5.281/cice5-git.2023.10.19=2023.10.19-v3zncpqjj2gyseudbwiudolcjq3k3leo/bin/cice_auscom_360x300_24x1_24p.exe
fullpath: /g/data/vk83/prerelease/apps/spack/0.22/release/linux-rocky8-x86_64/intel-19.0.5.281/cice5-git.2023.10.19_access-om2-4cy245xma7xr7x37a7sbavycyhiikbjl/bin/cice_auscom_360x300_24x1_24p.exe
hashes:
binhash: 3a65f67d21152e77034da28c22a94c66
md5: 37866455b057c85c3ea50c0ef0ea840b
binhash: 432d10c9f10536a6e30b54ed2d60282a
md5: 0e25017af3916f930ea35d4e4d815798
work/ocean/fms_ACCESS-OM.x:
fullpath: /g/data/vk83/apps/spack/0.20/release/linux-rocky8-x86_64/intel-19.0.5.281/mom5-git.2023.11.09=2023.11.09-qji4nlmr6utrribaiyhewe4je6mifguz/bin/fms_ACCESS-OM.x
fullpath: /g/data/vk83/prerelease/apps/spack/0.22/release/linux-rocky8-x86_64/intel-19.0.5.281/mom5-git.dev-2025.04.001_access-om2-s6ajqi6bfqu5i2f5f3owmq7hswxppgqk/bin/fms_ACCESS-OM.x
hashes:
binhash: 92ce1ff1a38f44f92ceafd67e8e7142c
md5: a3f10baeadb88e813b4a8121f61a6226
binhash: 0a7515c783654fc333e553762fc51041
md5: e05bcf5af4737fcc90f1e53d584c9427
Loading
Loading