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102 changes: 42 additions & 60 deletions config.yaml
Original file line number Diff line number Diff line change
@@ -1,68 +1,50 @@
# Payu configuration

# If submitting to a different project to your default, uncomment line below
# and change project code as appropriate; also set shortpath below
# project: x77
# Force payu to always find, and save, files in this scratch project directory
# shortpath: /scratch/v45

# Using payu sync is recommend to copy data from ephemeral scratch space to
# longer term storage
sync:
enable: False # set path below and change to true
path: null # Set to location on /g/data (e.g. /g/data/PROJECT/USER/EXPERIMENT)
restarts: True
exclude_uncollated: False

#Model software version
modules:
use:
- /g/data/vk83/modules
load:
- access-om3/2025.08.001

queue: normal
ncpus: 240
jobfs: 10GB
mem: 960GB

walltime: 02:00:00
jobname: 100km_jra55do_ryf

model: access-om3
collate: false
exe: access-om3-MOM6-CICE6
input:
- /g/data/vk83/configurations/inputs/access-om3/share/meshes/global.100km/2024.01.25/access-om2-100km-ESMFmesh.nc
- /g/data/vk83/configurations/inputs/access-om3/share/meshes/global.100km/2024.01.25/access-om2-100km-nomask-ESMFmesh.nc
- /g/data/vk83/prerelease/configurations/inputs/access-om3/share/meshes/share/2026.01.21/JRA55do-datm-ESMFmesh.nc
- /g/data/vk83/prerelease/configurations/inputs/access-om3/share/meshes/share/2026.01.21/JRA55do-drof-ESMFmesh.nc
- /g/data/vk83/prerelease/configurations/inputs/access-om3/mom/tidal_external_files/global.100km/2025.09.22/bottom_roughness.nc
- /g/data/vk83/prerelease/configurations/inputs/access-om3/mom/tidal_external_files/global.100km/2025.09.22/tideamp.nc
- /g/data/vk83/configurations/inputs/access-om3/share/grids/global.100km/2020.10.22/topog.nc
- /g/data/vk83/configurations/inputs/access-om3/mom/grids/mosaic/global.100km/2020.05.30/ocean_hgrid.nc
- /g/data/vk83/prerelease/configurations/inputs/access-om3/mom/grids/vertical/share/2025.03.12/ocean_vgrid.nc
- /g/data/vk83/prerelease/configurations/inputs/access-om3/mom/initial_conditions/global.100km/2025.10.24/woa23_ts_01_mom.nc
- /g/data/vk83/prerelease/configurations/inputs/access-om3/mom/surface_salt_restoring/global.100km/2025.10.24/salt_sfc_restore.nc
- /g/data/vk83/prerelease/configurations/inputs/access-om3/mom/chlorophyll/global.100km/2025.11.25/chl_globcolour_monthly_clim.nc
- /g/data/vk83/configurations/inputs/access-om3/cice/grids/global.100km/2024.05.14/kmt.nc
- /g/data/vk83/configurations/inputs/access-om3/cice/initial_conditions/global.100km/2023.07.28/iced.1900-01-01-10800.nc
- /g/data/vk83/configurations/inputs/JRA-55/RYF/v1-6/data

collate: false
runlog: false
metadata:
enable: false
- /g/data/vk83/configurations/inputs/access-om3/share/meshes/global.100km/2024.01.25/access-om2-100km-ESMFmesh.nc
- /g/data/vk83/configurations/inputs/access-om3/share/meshes/global.100km/2024.01.25/access-om2-100km-nomask-ESMFmesh.nc
- /g/data/vk83/prerelease/configurations/inputs/access-om3/share/meshes/share/2026.01.21/JRA55do-datm-ESMFmesh.nc
- /g/data/vk83/prerelease/configurations/inputs/access-om3/share/meshes/share/2026.01.21/JRA55do-drof-ESMFmesh.nc
- /g/data/vk83/prerelease/configurations/inputs/access-om3/mom/tidal_external_files/global.100km/2025.09.22/bottom_roughness.nc
- /g/data/vk83/prerelease/configurations/inputs/access-om3/mom/tidal_external_files/global.100km/2025.09.22/tideamp.nc
- /g/data/vk83/configurations/inputs/access-om3/share/grids/global.100km/2020.10.22/topog.nc
- /g/data/vk83/configurations/inputs/access-om3/mom/grids/mosaic/global.100km/2020.05.30/ocean_hgrid.nc
- /g/data/vk83/prerelease/configurations/inputs/access-om3/mom/grids/vertical/share/2025.03.12/ocean_vgrid.nc
- /g/data/vk83/prerelease/configurations/inputs/access-om3/mom/initial_conditions/global.100km/2025.10.24/woa23_ts_01_mom.nc
- /g/data/vk83/prerelease/configurations/inputs/access-om3/mom/surface_salt_restoring/global.100km/2025.10.24/salt_sfc_restore.nc
- /g/data/vk83/prerelease/configurations/inputs/access-om3/mom/chlorophyll/global.100km/2025.11.25/chl_globcolour_monthly_clim.nc
- /g/data/vk83/configurations/inputs/access-om3/cice/grids/global.100km/2024.05.14/kmt.nc
- /g/data/vk83/configurations/inputs/access-om3/cice/initial_conditions/global.100km/2023.07.28/iced.1900-01-01-10800.nc
- /g/data/vk83/configurations/inputs/JRA-55/RYF/v1-6/data
jobfs: 10GB
jobname: 100km_jra55do_ryf
manifest:
reproduce:
exe: false
inputs: false

userscripts:
archive: /usr/bin/bash /g/data/vk83/apps/om3-scripts/payu_config/archive.sh

postscript: -v PROJECT,SCRIPTS_DIR=/g/data/vk83/apps/om3-scripts -lstorage=${PBS_NCI_STORAGE}+gdata/xp65 /g/data/vk83/apps/om3-scripts/payu_config/postscript.sh

mem: 960GB
metadata:
enable: false
model: access-om3
modules:
load:
- access-om3/pr163-2
use:
- /g/data/vk83/modules
- /g/data/vk83/prerelease/modules
ncpus: 240
payu_minimum_version: 1.2.0
postscript: -v PROJECT,SCRIPTS_DIR=/g/data/vk83/apps/om3-scripts -lstorage=${PBS_NCI_STORAGE}+gdata/xp65
/g/data/vk83/apps/om3-scripts/payu_config/postscript.sh
qsub_flags: -W umask=027

queue: normal
restart_freq: 1YS
payu_minimum_version: 1.2.0
runlog: false
sync:
enable: false
exclude_uncollated: false
path: null
restarts: true
userscripts:
archive: /usr/bin/bash /g/data/vk83/apps/om3-scripts/payu_config/archive.sh
walltime: 02:00:00
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