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4 changes: 3 additions & 1 deletion README.md
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Expand Up @@ -11,7 +11,9 @@ The data used in this analysis are publicly available on [Quilt](https://open.qu
> [!NOTE]
> These are the basic installation steps. However, our recommendation is to install with `pyenv` and `pdm`. See advanced installation instructions [here](docs/INSTALL.md).

1. Install Python 3.9 and `git`. Update pip at least to `24.0.0`.
This analysis is tested on Ubuntu 18.04. Other operating systems may work, but there are known dependency issues with MacOS.

1. Install Python 3.9 and `git`. Update pip at least to `24.0.0`. Confirm your versions with `python --version` and `pip --version`.
2. Clone this git repository.
```bash
git clone [email protected]:AllenCell/nuc-morph-analysis.git
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