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Allen Institute

Please visit http://alleninstitute.github.io/ for more information.

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  1. AllenSDK AllenSDK Public

    code for reading and processing Allen Institute for Brain Science data

    Jupyter Notebook 351 151

  2. dipde dipde Public

    Numerical solver for coupled population density equations

    Python 23 14

Repositories

Showing 10 of 409 repositories
  • deep-neurographs Public

    A Python package that utilizes machine learning to correct split mistakes in a fragmented neuron segmentation.

    AllenInstitute/deep-neurographs’s past year of commit activity
    Jupyter Notebook 3 MIT 0 0 0 Updated Jan 22, 2025
  • dynamic_routing_analysis Public

    Tools for accessing, processing and presenting data from Dynamic Routing experiments.

    AllenInstitute/dynamic_routing_analysis’s past year of commit activity
    Jupyter Notebook 1 0 0 0 Updated Jan 22, 2025
  • mtrain_regimens Public

    Repository to track training stages and regimens for visual behavior

    AllenInstitute/mtrain_regimens’s past year of commit activity
    Python 3 4 14 0 Updated Jan 22, 2025
  • openscope_mousemotion Public Forked from YayaWeizz/RDK

    Moving dot stimuli for the OpenScope MouseMotion project

    AllenInstitute/openscope_mousemotion’s past year of commit activity
    Python 0 GPL-3.0 1 0 0 Updated Jan 22, 2025
  • cell_type_mapper Public

    Repository for storing prototype functionality implementations for the BKP

    AllenInstitute/cell_type_mapper’s past year of commit activity
    Python 21 4 5 2 Updated Jan 21, 2025
  • txtox Public

    Experiments to relate gene expression and anatomical location

    AllenInstitute/txtox’s past year of commit activity
    Jupyter Notebook 0 0 0 0 Updated Jan 21, 2025
  • biofile-finder Public

    An open-use web application created for easy access, collaboration, and sharing of datasets through rich metadata search, filter, sort, and direct viewing in common industry applications or in our web-based 3D Volume Viewer.

    AllenInstitute/biofile-finder’s past year of commit activity
    TypeScript 4 BSD-3-Clause 1 57 4 Updated Jan 21, 2025
  • MIES Public

    Multichannel Igor Electrophysiology Suite

    AllenInstitute/MIES’s past year of commit activity
    IGOR Pro 25 9 293 7 Updated Jan 21, 2025
  • TEM_comms Public

    Pigeon messages for the next generation TEM imaging system

    AllenInstitute/TEM_comms’s past year of commit activity
    Python 0 BSD-3-Clause 2 1 0 Updated Jan 21, 2025
  • npc_sessions_cache Public

    Scripts, notebooks and plots that operate on NWB or NWB-like objects from `npc_sessions` in the cloud.

    AllenInstitute/npc_sessions_cache’s past year of commit activity
    Jupyter Notebook 0 0 0 0 Updated Jan 21, 2025
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