GitHub - Arshya-Guru/aspimquant_CellSeg3D: A napari plugin for direct 3D cell segmentation -- taking you through training, inference, and review of masks

Name		Name	Last commit message	Last commit date
Latest commit History 968 Commits
.github/workflows		.github/workflows
.napari		.napari
conda		conda
napari_cellseg3d		napari_cellseg3d
.gitignore		.gitignore
CODE_OF_CONDUCT.md		CODE_OF_CONDUCT.md
COLOCALIZATION_ANNOTATION_GUIDE.md		COLOCALIZATION_ANNOTATION_GUIDE.md
LICENSE		LICENSE
QUICKSTART.md		QUICKSTART.md
README.md		README.md
annotate_patches_napari.py		annotate_patches_napari.py
extract_colocalized_patches.py		extract_colocalized_patches.py
pyproject.toml		pyproject.toml
setup_nnunet_interactive.sh		setup_nnunet_interactive.sh
zarrnii_example.ipynb		zarrnii_example.ipynb