Software required to run scripts
- guppy_basecaller and guppy_barcoder from nanopore (https://community.nanoporetech.com/downloads)
- blastn for command line (https://blast.ncbi.nlm.nih.gov/Blast.cgi?PAGE_TYPE=BlastDocs&DOC_TYPE=Download)
- awk
- GNU parallel
- python with module pandas
Running the scripts
Apply the sequence of scripts outlined in dna-seq_code.txt to your nanopore sequencing run