HFP (Human Foods Program)
Popular repositories Loading
-
snp-pipeline
snp-pipeline PublicSNP Pipeline is a pipeline for the production of SNP matrices from sequence data used in the phylogenetic analysis of pathogenic organisms sequenced from samples of interest to food safety.
-
-
-
bettercallsal
bettercallsal PublicNextflow workflows to assign Salmonella serotype based on Genome similarity using MASH, SOURMASH and KMA.
Repositories
- bioconda-recipes Public Forked from bioconda/bioconda-recipes
Conda recipes for the bioconda channel.
CFSAN-Biostatistics/bioconda-recipes’s past year of commit activity - CSP2 Public
A Nextflow pipeline for fast and accurate SNP distance estimation from WGS read data or genome assemblies
CFSAN-Biostatistics/CSP2’s past year of commit activity - One_Health_Enteric_Package Public
One Health-compatible metadata package for genomic surveillance of enteric microbes
CFSAN-Biostatistics/One_Health_Enteric_Package’s past year of commit activity - bettercallsal Public
Nextflow workflows to assign Salmonella serotype based on Genome similarity using MASH, SOURMASH and KMA.
CFSAN-Biostatistics/bettercallsal’s past year of commit activity - MultiLab-POD-LOD-ICC Public
This is a Shiny app for interlaboratory microbiological method validation studies.
CFSAN-Biostatistics/MultiLab-POD-LOD-ICC’s past year of commit activity - table-ops Public
CFSAN-Biostatistics/table-ops’s past year of commit activity - ww_simulations Public
CFSAN-Biostatistics/ww_simulations’s past year of commit activity