[ENG-7411] poetry and assorted cleanup

[aaxelb]

• use poetry to install/manage dependencies
  • remove requirements.txt, dev-requirements.txt, constraints.txt
  • add dependencies to pyproject.toml
  • add poetry.lock
  • update Dockerfile and docker-compose.yml to use poetry
• assorted cleanup
  • update github action to use python 3.13
  • remove (now unused) elasticsearch5 code (including sharev2_elastic5 index strategy)
  • remove (now unused) trove_indexcard_flats index strategy

[coveralls]

coverage: 77.87% (-1.3%) from 79.162%
when pulling 9e9e3a2 on aaxelb:mob/2025-03-26
into fd3268a on CenterForOpenScience:feature/share-cleanupgrade-2025.

[felliott]

Looks good to me! I had a couple of small questions, but neither is a dealbreaker.

Cheers,
@felliott

[felliott]

Looks good. Docker build had a few nitpicks, but these aren't dealbreakers:

 3 warnings found (use docker --debug to expand):                                                                                                                                                           
 - FromAsCasing: 'as' and 'FROM' keywords' casing do not match (line 1)
 - LegacyKeyValueFormat: "ENV key=value" should be used instead of legacy "ENV key value" format (line 60)
 - LegacyKeyValueFormat: "ENV key=value" should be used instead of legacy "ENV key value" format (line 61)

[felliott]

Should this be pinned to the same version as the Dockerfile (2.1.1)? I don't have a strong opinion. It might be worth to leave unpinned as a canary.