UniProtMapper v1.1.5

• Update deprecate support for python < 3.9

Full Changelog: v1.1.4...v1.1.5

UniProtMapper v1.1.4

Including PR #8 modifying the get method to support full versions of UniProtKB return fields for cross-references.

• Documentation added to illustrate the changes (can now support "full" cross reference fields; e.g.: xref_pdb_full)
• Better handling BaseUniProt's class properties
• Improved clarity on get method's docstrings for both APIs

Acknowledgement:
@MoonDavid for the PR

UniProtMapper v1.1.3

• Add documentation to the package;
• Add a new class (UniProtKB) to perform field-based queries to the UniProt database;
• Add tests covering the new class and new methods implemented;
• Deprecate the ProtMapper.__call__ method and keep only the get method available on both implemented API classes;
• Deprecate retrieving ProtMapper's get_id_mapping_results_search as different formats other than tsv (default in previous release)
• Python 3.13 is now also tested on the CI and supported by uniprot-id-mapper

UniProtMapper v1.1.2

These changes include:

• Update most recent return and cross-reference fields from UniProt;
• Setup automatic versioning of the package using setuptools_scm;
• Add the fetch_cross_referenced_db_details method for updating the information on the referenced databases;
• Update tests & README to reflect the changes;

Acknowledgement:

• @jaglac for the PR #1

UniProtMapper v1.1.1

First release of the package. Current functionalities include:

1. Map (almost) any UniProt cross-referenced IDs to other identifiers & vice-versa;
2. Programmatically retrieve any of the supported return fields from both UniProt-SwissProt and UniProt-TrEMBL (unreviewed) databases;

UniProtMapper now includes a command-line interface (CLI), accessible through the command protmap.