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Add endpoints for LIF to TIFF conversion #267

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merged 84 commits into from
May 9, 2024
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@d-j-hatton d-j-hatton commented May 9, 2024

Part of correlative workflow. Resolves #264. Part of work on #288.

Eu Pin Tien and others added 30 commits April 4, 2024 14:03
…ient, server, and developer installations. Commented on sections of code that have been successfully ported over to pyproject.toml. Rearranged groups for human readability.
…ed for pip installation of Murfey. Tested with Python 3.11.8.
…ss. Doesn't appear to be working just yet. Will need to find plugin that allows flake8 to interpret .toml configuration entries.
…version information). Pre-commit now runs through to completion, albeit with many errors.
…g.yaml file, allowing pre-commit to correctly implement Flake8 checks using the settings specified in the pyproject.toml file. Currently, only the mypy check is still failing.
…for behavioural differences between single and double quotes.
…potentially be None, so encased paragraph in an if block to check if TransportManager is valid.
… no attribute MurfeyTUI. Commented out paragraphs associated with that function until confirmation that file is no longer needed.
…ml to investiga

te differences in implemented corrections.
…to setup-update

Updated branch to reflect latest changes to main branch.
… Pre-Commit settings in pyproject.toml and pre-commit-config.yaml instead.
…non-critical warning messages, and print out clearer messages.
@d-j-hatton d-j-hatton merged commit 633f56a into main May 9, 2024
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@d-j-hatton d-j-hatton deleted the cryo-clem-endpoints branch May 9, 2024 14:30
@tieneupin tieneupin added the cryo-clem Part of the cryo-CLEM pipeline extension label May 24, 2024
@tieneupin tieneupin added server Relates to the server component client Relates to the client component labels Jun 20, 2024
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client Relates to the client component cryo-clem Part of the cryo-CLEM pipeline extension server Relates to the server component
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Add Murfey endpoints for cryo-CLEM workflow
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