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Fix #14 issue #15

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Fix #14 issue #15

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5e0cfeb
Update rna.py
forxhunter Aug 19, 2024
fef142a
Update enzyme.py
forxhunter Aug 19, 2024
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3 changes: 2 additions & 1 deletion etfl/core/enzyme.py
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Original file line number Diff line number Diff line change
Expand Up @@ -115,7 +115,8 @@ def peptide(self, value):
@property
def molecular_weight(self):
if not self._molecular_weight_override:
return molecular_weight(self.peptide, seq_type='protein') / 1000 # g.mol^-1 -> kg.mol^-1 (SI) = g.mmol^-1
# return molecular_weight(self.peptide, seq_type='protein') / 1000 # g.mol^-1 -> kg.mol^-1 (SI) = g.mmol^-1
return molecular_weight(str(self.peptide), 'protein') /1000
else:
return self._molecular_weight_override

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5 changes: 3 additions & 2 deletions etfl/core/rna.py
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Expand Up @@ -52,7 +52,8 @@ def init_variable(self, queue=False):
@property
def molecular_weight(self):
if not self._molecular_weight_override:
return molecular_weight(self.rna, seq_type='RNA') / 1000 # g.mol^-1 ->
return molecular_weight(str(self.rna), seq_type='RNA') / 1000 # g.mol^-1 ->
# return molecular_weight(self.rna, seq_type='RNA') / 1000 # g.mol^-1 ->
# kg.mol^-1 (SI) =
# g.mmol^-1
else:
Expand Down Expand Up @@ -125,4 +126,4 @@ def aminoacid(self):

@property
def molecular_weight(self):
return 25 # an average weight based on https://bionumbers.hms.harvard.edu/files/Nucleic%20Acids_Sizes_and_Molecular_Weights_2pgs.pdf
return 25 # an average weight based on https://bionumbers.hms.harvard.edu/files/Nucleic%20Acids_Sizes_and_Molecular_Weights_2pgs.pdf