Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

feature/SOF-7512 Step Pt tutorial #306

Merged
merged 12 commits into from
Dec 31, 2024
Merged

feature/SOF-7512 Step Pt tutorial #306

merged 12 commits into from
Dec 31, 2024

Conversation

VsevolodX
Copy link
Member

  • feat: add Pt step tutorial (claude)
  • update: human touch + mkdocs

Copy link

netlify bot commented Dec 29, 2024

Deploy Preview for mat3ra-documentation ready!

Name Link
🔨 Latest commit b086c43
🔍 Latest deploy log https://app.netlify.com/sites/mat3ra-documentation/deploys/67738beb7a685900083f08f1
😎 Deploy Preview https://deploy-preview-306--mat3ra-documentation.netlify.app
📱 Preview on mobile
Toggle QR Code...

QR Code

Use your smartphone camera to open QR code link.

To edit notification comments on pull requests, go to your Netlify site configuration.

@VsevolodX VsevolodX marked this pull request as ready for review December 29, 2024 23:22
1. Creating a Pt(211) surface which inherently contains steps
2. Creating a terrace step on a Pt(111) surface using the TerraceSlabDefectBuilder

## Method 1: Creating Pt(211) Step Surface
Copy link
Member

Choose a reason for hiding this comment

The reason will be displayed to describe this comment to others. Learn more.

  1. Method I: Create Pt(211) Surface.


![Pt(211) Surface](/images/tutorials/materials/defects/defect_surface_step_platinum/3-wave-result-pt-211-surface.webp "Pt(211) Surface")

## Method 2: Creating Terrace Step on Pt(111)
Copy link
Member

Choose a reason for hiding this comment

The reason will be displayed to describe this comment to others. Learn more.

  1. Method II: Create Terrace Step Defect on Pt(111).

PIVOT_COORDINATE = [0.5, 0.5, 0.5] # Point the cutting plane passes through, in crystal coordinates
NUMBER_OF_ADDED_LAYERS = 1 # Height of terrace in atomic layers
USE_CARTESIAN_COORDINATES = False # Use cartesian instead of crystal coordinates
ROTATE_TO_MATCH_PBC = True # Rotate to match periodic boundary conditions
Copy link
Member

Choose a reason for hiding this comment

The reason will be displayed to describe this comment to others. Learn more.

Let's move comments to lines above


Run the notebook to create the Pt(111) surface with a terrace step.

![Pt(111) Surface with Terrace Step](/images/tutorials/materials/defects/defect_surface_step_platinum/5-wave-result-pt-terrace.webp "Pt(111) Surface with Terrace Step")
Copy link
Member

Choose a reason for hiding this comment

The reason will be displayed to describe this comment to others. Learn more.

Let's include repetitions in the visual

@VsevolodX VsevolodX merged commit 1fabbd9 into master Dec 31, 2024
11 checks passed
@VsevolodX VsevolodX deleted the feature/SOF-7512 branch December 31, 2024 06:53
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

Successfully merging this pull request may close these issues.

2 participants