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allow for missing obs file w/o a JEDI crash #400

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allow for missing obs file w/o a JEDI crash #400

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4697648
the entry here allows for missing obs file w/o a crash
rtodling Aug 1, 2024
f045822
Merge branch 'develop' into feature/rtodling/allow_for_missing_ob_type
rtodling Nov 20, 2024
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1 change: 1 addition & 0 deletions src/swell/configuration/jedi/interfaces/geos_atmosphere/observations/aircraft.yaml
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Expand Up @@ -4,6 +4,7 @@ obs space:
engine:
type: H5File
obsfile: '{{cycle_dir}}/aircraft.{{window_begin}}.nc4'
missing file action: warn
obsgrouping:
group variables: ["stationIdentification", "releaseTime"]
sort variable: "pressure"
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1 change: 1 addition & 0 deletions src/swell/configuration/jedi/interfaces/geos_atmosphere/observations/airs_aqua.yaml
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Expand Up @@ -4,6 +4,7 @@ obs space:
engine:
type: H5File
obsfile: '{{cycle_dir}}/airs_aqua.{{window_begin}}.nc4'
missing file action: warn
obsdataout:
engine:
type: H5File
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1 change: 1 addition & 0 deletions src/swell/configuration/jedi/interfaces/geos_atmosphere/observations/amsr2_gcom-w1.yaml
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Expand Up @@ -4,6 +4,7 @@ obs space:
engine:
type: H5File
obsfile: '{{cycle_dir}}/amsr2_gcom-w1.{{window_begin}}.nc4'
missing file action: warn
obsdataout:
engine:
type: H5File
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1 change: 1 addition & 0 deletions src/swell/configuration/jedi/interfaces/geos_atmosphere/observations/amsua_aqua.yaml
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Expand Up @@ -4,6 +4,7 @@ obs space:
engine:
type: H5File
obsfile: '{{cycle_dir}}/amsua_aqua.{{window_begin}}.nc4'
missing file action: warn
obsdataout:
engine:
type: H5File
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1 change: 1 addition & 0 deletions src/swell/configuration/jedi/interfaces/geos_atmosphere/observations/amsua_metop-b.yaml
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Expand Up @@ -4,6 +4,7 @@ obs space:
engine:
type: H5File
obsfile: '{{cycle_dir}}/amsua_metop-b.{{window_begin}}.nc4'
missing file action: warn
obsdataout:
engine:
type: H5File
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1 change: 1 addition & 0 deletions src/swell/configuration/jedi/interfaces/geos_atmosphere/observations/amsua_metop-c.yaml
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Expand Up @@ -4,6 +4,7 @@ obs space:
engine:
type: H5File
obsfile: '{{cycle_dir}}/amsua_metop-c.{{window_begin}}.nc4'
missing file action: warn
obsdataout:
engine:
type: H5File
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1 change: 1 addition & 0 deletions src/swell/configuration/jedi/interfaces/geos_atmosphere/observations/amsua_n15.yaml
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Expand Up @@ -4,6 +4,7 @@ obs space:
engine:
type: H5File
obsfile: '{{cycle_dir}}/amsua_n15.{{window_begin}}.nc4'
missing file action: warn
obsdataout:
engine:
type: H5File
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1 change: 1 addition & 0 deletions src/swell/configuration/jedi/interfaces/geos_atmosphere/observations/amsua_n18.yaml
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Expand Up @@ -4,6 +4,7 @@ obs space:
engine:
type: H5File
obsfile: '{{cycle_dir}}/amsua_n18.{{window_begin}}.nc4'
missing file action: warn
obsdataout:
engine:
type: H5File
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1 change: 1 addition & 0 deletions src/swell/configuration/jedi/interfaces/geos_atmosphere/observations/amsua_n19.yaml
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Expand Up @@ -4,6 +4,7 @@ obs space:
engine:
type: H5File
obsfile: '{{cycle_dir}}/amsua_n19.{{window_begin}}.nc4'
missing file action: warn
obsdataout:
engine:
type: H5File
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1 change: 1 addition & 0 deletions src/swell/configuration/jedi/interfaces/geos_atmosphere/observations/atms_n20.yaml
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Expand Up @@ -4,6 +4,7 @@ obs space:
engine:
type: H5File
obsfile: '{{cycle_dir}}/atms_n20.{{window_begin}}.nc4'
missing file action: warn
obsdataout:
engine:
type: H5File
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1 change: 1 addition & 0 deletions src/swell/configuration/jedi/interfaces/geos_atmosphere/observations/atms_npp.yaml
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Expand Up @@ -4,6 +4,7 @@ obs space:
engine:
type: H5File
obsfile: '{{cycle_dir}}/atms_npp.{{window_begin}}.nc4'
missing file action: warn
obsdataout:
engine:
type: H5File
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1 change: 1 addition & 0 deletions src/swell/configuration/jedi/interfaces/geos_atmosphere/observations/avhrr3_metop-b.yaml
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Expand Up @@ -4,6 +4,7 @@ obs space:
engine:
type: H5File
obsfile: '{{cycle_dir}}/avhrr3_metop-b.{{window_begin}}.nc4'
missing file action: warn
obsdataout:
engine:
type: H5File
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1 change: 1 addition & 0 deletions src/swell/configuration/jedi/interfaces/geos_atmosphere/observations/avhrr3_n18.yaml
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Expand Up @@ -4,6 +4,7 @@ obs space:
engine:
type: H5File
obsfile: '{{cycle_dir}}/avhrr3_n18.{{window_begin}}.nc4'
missing file action: warn
obsdataout:
engine:
type: H5File
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1 change: 1 addition & 0 deletions src/swell/configuration/jedi/interfaces/geos_atmosphere/observations/avhrr3_n19.yaml
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Expand Up @@ -4,6 +4,7 @@ obs space:
engine:
type: H5File
obsfile: '{{cycle_dir}}/avhrr3_n19.{{window_begin}}.nc4'
missing file action: warn
obsdataout:
engine:
type: H5File
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1 change: 1 addition & 0 deletions src/swell/configuration/jedi/interfaces/geos_atmosphere/observations/cris-fsr_n20.yaml
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Expand Up @@ -4,6 +4,7 @@ obs space:
engine:
type: H5File
obsfile: '{{cycle_dir}}/cris-fsr_n20.{{window_begin}}.nc4'
missing file action: warn
obsdataout:
engine:
type: H5File
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1 change: 1 addition & 0 deletions src/swell/configuration/jedi/interfaces/geos_atmosphere/observations/cris-fsr_npp.yaml
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Expand Up @@ -4,6 +4,7 @@ obs space:
engine:
type: H5File
obsfile: '{{cycle_dir}}/cris-fsr_npp.{{window_begin}}.nc4'
missing file action: warn
obsdataout:
engine:
type: H5File
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1 change: 1 addition & 0 deletions src/swell/configuration/jedi/interfaces/geos_atmosphere/observations/gmi_gpm.yaml
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Expand Up @@ -4,6 +4,7 @@ obs space:
engine:
type: H5File
obsfile: '{{cycle_dir}}/gmi_gpm.{{window_begin}}.nc4'
missing file action: warn
obsdataout:
engine:
type: H5File
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1 change: 1 addition & 0 deletions src/swell/configuration/jedi/interfaces/geos_atmosphere/observations/gps.yaml
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Expand Up @@ -4,6 +4,7 @@ obs space:
engine:
type: H5File
obsfile: '{{cycle_dir}}/gps.{{window_begin}}.nc4'
missing file action: warn
obsgrouping:
group variables: [ 'sequenceNumber' ]
sort variable: 'impactHeightRO'
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1 change: 1 addition & 0 deletions src/swell/configuration/jedi/interfaces/geos_atmosphere/observations/iasi_metop-b.yaml
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Expand Up @@ -4,6 +4,7 @@ obs space:
engine:
type: H5File
obsfile: '{{cycle_dir}}/iasi_metop-b.{{window_begin}}.nc4'
missing file action: warn
obsdataout:
engine:
type: H5File
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1 change: 1 addition & 0 deletions src/swell/configuration/jedi/interfaces/geos_atmosphere/observations/iasi_metop-c.yaml
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Expand Up @@ -4,6 +4,7 @@ obs space:
engine:
type: H5File
obsfile: '{{cycle_dir}}/iasi_metop-c.{{window_begin}}.nc4'
missing file action: warn
obsdataout:
engine:
type: H5File
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1 change: 1 addition & 0 deletions src/swell/configuration/jedi/interfaces/geos_atmosphere/observations/mhs_metop-b.yaml
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Expand Up @@ -4,6 +4,7 @@ obs space:
engine:
type: H5File
obsfile: '{{cycle_dir}}/mhs_metop-b.{{window_begin}}.nc4'
missing file action: warn
obsdataout:
engine:
type: H5File
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1 change: 1 addition & 0 deletions src/swell/configuration/jedi/interfaces/geos_atmosphere/observations/mhs_metop-c.yaml
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Expand Up @@ -4,6 +4,7 @@ obs space:
engine:
type: H5File
obsfile: '{{cycle_dir}}/mhs_metop-c.{{window_begin}}.nc4'
missing file action: warn
obsdataout:
engine:
type: H5File
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1 change: 1 addition & 0 deletions src/swell/configuration/jedi/interfaces/geos_atmosphere/observations/mhs_n19.yaml
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Expand Up @@ -4,6 +4,7 @@ obs space:
engine:
type: H5File
obsfile: '{{cycle_dir}}/mhs_n19.{{window_begin}}.nc4'
missing file action: warn
obsdataout:
engine:
type: H5File
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1 change: 1 addition & 0 deletions src/swell/configuration/jedi/interfaces/geos_atmosphere/observations/mls55_aura.yaml
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Expand Up @@ -4,6 +4,7 @@ obs space:
engine:
type: H5File
obsfile: '{{cycle_dir}}/mls55_aura.{{window_begin}}.nc4'
missing file action: warn
obsdataout:
engine:
type: H5File
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1 change: 1 addition & 0 deletions src/swell/configuration/jedi/interfaces/geos_atmosphere/observations/omi_aura.yaml
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Expand Up @@ -4,6 +4,7 @@ obs space:
engine:
type: H5File
obsfile: '{{cycle_dir}}/omi_aura.{{window_begin}}.nc4'
missing file action: warn
obsdataout:
engine:
type: H5File
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1 change: 1 addition & 0 deletions src/swell/configuration/jedi/interfaces/geos_atmosphere/observations/ompsnm_npp.yaml
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Expand Up @@ -4,6 +4,7 @@ obs space:
engine:
type: H5File
obsfile: '{{cycle_dir}}/ompsnm_npp.{{window_begin}}.nc4'
missing file action: warn
obsdataout:
engine:
type: H5File
Expand Down