Skip to content

Add Pantherophis spiloides (gray ratsnake) species model#446

Open
ShanelKalicharan wants to merge 2 commits into
Gaius-Augustus:masterfrom
ShanelKalicharan:master
Open

Add Pantherophis spiloides (gray ratsnake) species model#446
ShanelKalicharan wants to merge 2 commits into
Gaius-Augustus:masterfrom
ShanelKalicharan:master

Conversation

@ShanelKalicharan

Copy link
Copy Markdown

This PR adds a species model for Pantherophis spiloides. It was trained on assembly GCA_037575465.2 (Canadian BioGenome Project, 98.8% BUSCO completeness) using miniprot alignments alignments from P. guttatus as training gene models. This is a helpful addition as there are currently no colubrid model, and very few reptile models. It should improve ab initio gene prediction for Pantherophis and other related species.

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment

Labels

None yet

Projects

None yet

Development

Successfully merging this pull request may close these issues.

1 participant