Milestones - ICGC-TCGA-PanCancer/PCAP-core · GitHub

1 Open 5 Closed

3.1.0

Closed Aug 26, 2016 Last updated over 8 years ago
Work directly with *.fa.gz (bgzip from samtools 1.3+) Drop -T 0 from
- Work directly with *.fa.gz (bgzip from samtools 1.3+)
- Drop -T 0 from bwa_mem.pl default mapping
Dropped as may be removed from core Sanger mapping in near future.
- Adapter trimming
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10 closed
1.11.0

Closed Jul 29, 2016 Last updated over 8 years ago

100% complete

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1.9.0

Closed Aug 3, 2015 Last updated over 9 years ago

100% complete

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0.3.0

Closed Jul 30, 2015 Last updated over 9 years ago

Addition of stats package and changes to required fields in bam_to_sra_xml.pl

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0.2.0

Closed Mar 31, 2014 Last updated almost 11 years ago

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