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# Source code for *A model for structured information representation in neural networks of the brain* | ||
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## Requirements | ||
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* Python >= 3.5 | ||
* NEST 2.12 | ||
* NumPy 1.17.0 | ||
* Matplotlib 3.1.1 | ||
* Scikit-learn 0.21.2 | ||
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## Installing the NEST module | ||
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To build and install the required NEST module, run the *run-build.sh* script in | ||
the *nest_module* subdirectory. This requires NEST to be set up properly with | ||
all environment variables set. | ||
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## Generating the data | ||
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To generate the data for all the main experiments described in the results, run | ||
*run_experiments.sh* (note that this can take very long, i.e. up to a day). | ||
Afterwards, run *summary_experiments.sh* to get an overview of the results. To generate | ||
just parts of the data, see *run_all.sh* for how to invoke the Python files. | ||
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## Running the robustness experiments | ||
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To generate the data for the random parameter variation experiments described | ||
in the methods, run *run_robustness_experiments.sh* (note that this can take very long, i.e. multiple days). Afterwards, run | ||
*summary_robustness_experiments.sh* to get an overview of the results. |
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