VariantInSample_GenomicSourceClass

VariantInSample_GenomicSourceClass

Data Element Concept

Attribute	Value
ObjectClass	VariantInSample
ObjectProperty	GenomicSourceClass
DataElementConcept	VariantInSample_GenomicSourceClass
ObjectPropertyLabelEN	Genomic Source Class
ObjectPropertyLabelFR	Genomic Source Class
DataElementConceptDefEN	Genomic class of the variant (eg: germline, somatic, and prenatal)
DataElementConceptDefFR	Classe génomique du variant (par exemple: constitutionel, somatique et prénatal)

Specifications

Attribute	Value
FormatConceptualDomain	String
Required	mandatory

Usage

Attribute	Value
Examples	Somatic

ConceptualDomain

ValueMeaning	LabelValueMeaning
LOINC:LA6683-2	Germline
LOINC:LA6684-0	Somatic
LOINC:LA10429-1	Prenatal
LOINC:LA18197-6	Unknown genomic origin