Skip to content

Add list of version of pubmed-to-gse endpoint#28

Merged
olegs merged 1 commit intomainfrom
feature/pubmed-to-gse-flat
Apr 28, 2026
Merged

Add list of version of pubmed-to-gse endpoint#28
olegs merged 1 commit intomainfrom
feature/pubmed-to-gse-flat

Conversation

@MomirMilutinovic
Copy link
Copy Markdown
Collaborator

This PR introduces the /pubmed-to-gse-flat endpoint, which returns GEO accessions of datasets associated with a list of PubMed IDs as a list rather than a dictionary. The motivation for adding this endpoint is the need to call ELink individually for every input PubMed ID. The new endpoint reduces latency by requiring only 1 ELink call regardless of input size.

The only change in this PR is the addition of the /pubmed-to-gse-flat endpoint, since the DatasetLinker interface already supports this use case.

@MomirMilutinovic MomirMilutinovic requested a review from olegs April 23, 2026 11:00
@olegs olegs merged commit e5865af into main Apr 28, 2026
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment

Labels

None yet

Projects

None yet

Development

Successfully merging this pull request may close these issues.

2 participants