Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Make copying a view of a KronTrav faster #97

Open
wants to merge 4 commits into
base: master
Choose a base branch
from
Open
Changes from all commits
Commits
File filter

Filter by extension

Filter by extension

Conversations
Failed to load comments.
Loading
Jump to
Jump to file
Failed to load files.
Loading
Diff view
Diff view
2 changes: 1 addition & 1 deletion Project.toml
Original file line number Diff line number Diff line change
@@ -1,7 +1,7 @@
name = "LazyBandedMatrices"
uuid = "d7e5e226-e90b-4449-9968-0f923699bf6f"
authors = ["Sheehan Olver <solver@mac.com>"]
version = "0.8.9"
version = "0.8.10"

[deps]
ArrayLayouts = "4c555306-a7a7-4459-81d9-ec55ddd5c99a"
21 changes: 13 additions & 8 deletions src/LazyBandedMatrices.jl
Original file line number Diff line number Diff line change
@@ -41,7 +41,7 @@ import BlockBandedMatrices: BlockSlice, Block1, AbstractBlockBandedLayout,
subblockbandwidths, BandedBlockBandedMatrix, BlockBandedMatrix, BlockBandedLayout,
AbstractBandedBlockBandedLayout, BandedBlockBandedLayout, BandedBlockBandedStyle, BlockBandedStyle,
blockcolsupport, BlockRange1, blockrowsupport, BlockIndexRange1,
BlockBandedColumnMajor
BlockBandedColumnMajor, blockbanded_copyto!
import BlockArrays: BlockSlice1, BlockLayout, AbstractBlockStyle, block, blockindex, BlockKron, viewblock, blocks, BlockSlices, AbstractBlockLayout, blockvec

# for bidiag/tridiag
@@ -533,10 +533,10 @@ _broadcastarray2broadcasted(::StructuredBroadcastLayouts{F}, A) where F = _broad
_broadcastarray2broadcasted(::StructuredBroadcastLayouts{F}, A::BroadcastArray) where F = _broadcastarray2broadcasted(BroadcastLayout{F}(), A)

_copyto!(::AbstractBandedLayout, ::BroadcastBandedLayout, dest::AbstractMatrix, bc::AbstractMatrix) =
copyto!(dest, _broadcastarray2broadcasted(bc))
copyto!(dest, _broadcastarray2broadcasted(MemoryLayout(bc), bc))

_copyto!(_, ::BroadcastBandedLayout, dest::AbstractMatrix, bc::AbstractMatrix) =
copyto!(dest, _broadcastarray2broadcasted(bc))
copyto!(dest, _broadcastarray2broadcasted(MemoryLayout(bc), bc))

_banded_broadcast!(dest::AbstractMatrix, f, (A,B)::Tuple{AbstractMatrix{T},AbstractMatrix{V}}, _, ::Tuple{<:Any,ApplyBandedLayout{typeof(*)}}) where {T,V} =
broadcast!(f, dest, BandedMatrix(A), BandedMatrix(B))
@@ -582,15 +582,15 @@ _mulbanded_copyto!(dest::AbstractArray{T}, a, b) where T = muladd!(one(T), a, b,
_mulbanded_copyto!(dest::AbstractArray{T}, a, b, c, d...) where T = _mulbanded_copyto!(dest, mul(a,b), c, d...)

_mulbanded_BandedMatrix(A, _) = A
_mulbanded_BandedMatrix(A, ::NTuple{2,OneTo{Int}}) = BandedMatrix(A)
_mulbanded_BandedMatrix(A) = _mulbanded_BandedMatrix(A, axes(A))
_mulbanded_BandedMatrix(A, ::NTuple{2,Int}) = BandedMatrix(A)
_mulbanded_BandedMatrix(A) = _mulbanded_BandedMatrix(A, size(A))

_copyto!(::AbstractBandedLayout, ::ApplyBandedLayout{typeof(*)}, dest::AbstractMatrix, src::AbstractMatrix) =
_mulbanded_copyto!(dest, map(_mulbanded_BandedMatrix,arguments(src))...)

_mulbanded_BandedBlockBandedMatrix(A, _) = A
_mulbanded_BandedBlockBandedMatrix(A, ::NTuple{2,OneTo{Int}}) = BandedBlockBandedMatrix(A)
_mulbanded_BandedBlockBandedMatrix(A) = _mulbanded_BandedBlockBandedMatrix(A, axes(A))
_mulbanded_BandedBlockBandedMatrix(A, ::NTuple{2,Int}) = BandedBlockBandedMatrix(A)
_mulbanded_BandedBlockBandedMatrix(A) = _mulbanded_BandedBlockBandedMatrix(A, size(A))

_copyto!(::AbstractBandedBlockBandedLayout, ::ApplyBandedBlockBandedLayout{typeof(*)}, dest::AbstractMatrix, src::AbstractMatrix) =
_mulbanded_copyto!(dest, map(_mulbanded_BandedBlockBandedMatrix,arguments(src))...)
@@ -881,7 +881,8 @@ BandedLazyLayouts = Union{AbstractLazyBandedLayout, BandedColumns{LazyLayout}, B
TriangularLayout{UPLO,UNIT,BandedRows{LazyLayout}} where {UPLO,UNIT},
TriangularLayout{UPLO,UNIT,BandedColumns{LazyLayout}} where {UPLO,UNIT},
SymTridiagonalLayout{LazyLayout}, BidiagonalLayout{LazyLayout}, TridiagonalLayout{LazyLayout},
SymmetricLayout{BandedColumns{LazyLayout}}, HermitianLayout{BandedColumns{LazyLayout}}}
SymmetricLayout{BandedColumns{LazyLayout}}, HermitianLayout{BandedColumns{LazyLayout}},
BidiagonalLayout{LazyLayout,LazyLayout}}

StructuredLazyLayouts = Union{BandedLazyLayouts,
BlockBandedColumns{LazyLayout}, BandedBlockBandedColumns{LazyLayout},
@@ -958,9 +959,13 @@ copy(M::Mul{BroadcastLayout{typeof(*)}, <:StructuredLazyLayouts}) = lazymaterial
## padded copy
mulreduce(M::Mul{<:StructuredLazyLayouts, <:PaddedLayout}) = MulAdd(M)
mulreduce(M::Mul{<:StructuredApplyLayouts{F}, D}) where {F,D<:PaddedLayout} = Mul{ApplyLayout{F},D}(M.A, M.B)
mulreduce(M::Mul{<:PaddedLayout, <:StructuredLazyLayouts}) = MulAdd(M)
mulreduce(M::Mul{D, <:StructuredApplyLayouts{F}}) where {F,D<:PaddedLayout} = Mul{D,ApplyLayout{F}}(M.A, M.B)
# need to overload copy due to above
copy(M::Mul{<:StructuredLazyLayouts, <:PaddedLayout}) = copy(mulreduce(M))
copy(M::Mul{<:PaddedLayout, <:StructuredLazyLayouts}) = copy(mulreduce(M))
simplifiable(::Mul{<:StructuredLazyLayouts, <:PaddedLayout}) = Val(true)
simplifiable(::Mul{<:PaddedLayout, <:StructuredLazyLayouts}) = Val(true)


copy(L::Ldiv{ApplyBandedLayout{typeof(*)}, Lay}) where Lay = copy(Ldiv{ApplyLayout{typeof(*)},Lay}(L.A, L.B))
15 changes: 15 additions & 0 deletions src/blockkron.jl
Original file line number Diff line number Diff line change
@@ -64,6 +64,9 @@ function colsupport(A::DiagTrav{<:Any,2}, _)
axes(A,1)[bs]
end

copy(A::DiagTrav) = DiagTrav(copy(A.array))
==(A::DiagTrav, B::PseudoBlockVector) = PseudoBlockVector(A) == B
==(A::PseudoBlockVector, B::DiagTrav) = A == PseudoBlockVector(B)

function getindex(A::DiagTrav, K::Block{1})
@boundscheck checkbounds(A, K)
@@ -201,6 +204,7 @@ function _krontrav_getindex(Kin::Block{2}, A, B, C)
end

getindex(M::KronTrav{<:Any,2}, K::Block{2}) = _krontrav_getindex(K, M.args...)
# getindex(M::KronTrav{<:Any,2}, K::BlockIndex{2}) = _krontrav_getindex(K, M.args...)


getindex(A::KronTrav{<:Any,N}, kj::Vararg{Int,N}) where N =
@@ -223,6 +227,7 @@ isbandedblockbanded(A::KronTrav) = isblockbanded(A) && length(A.args) == 2
convert(::Type{B}, A::KronTrav{<:Any,2}) where B<:BandedBlockBandedMatrix = convert(B, BandedBlockBandedMatrix(A))

struct KronTravBandedBlockBandedLayout <: AbstractBandedBlockBandedLayout end
struct SubKronTravBandedBlockBandedLayout <: AbstractBandedBlockBandedLayout end
struct KronTravLayout{M} <: AbstractBlockLayout end


@@ -243,6 +248,16 @@ sublayout(::KronTravBandedBlockBandedLayout, ::Type{<:NTuple{2,BlockSlice{BlockR
sub_materialize(::Union{KronTravLayout,KronTravBandedBlockBandedLayout}, V) = KronTrav(map(sub_materialize, krontravargs(V))...)


_copyto!(_, ::KronTravBandedBlockBandedLayout, dest::AbstractMatrix, src::AbstractMatrix) = blockbanded_copyto!(dest, sub_materialize(src))
function _copyto!(_, ::SubKronTravBandedBlockBandedLayout, dest::AbstractMatrix, src::AbstractMatrix)
KR, JR = parentindices(src)
# use Base.OneTo range which is a Kron Trav
KR2,JR2 = Block.(Base.OneTo(Int(last(KR.block)))),Block.(Base.OneTo(Int(last(JR.block))))
# materialize parent with KR2,JR2 ranges then copyto!
copyto!(dest, view(BandedBlockBandedMatrix(view(parent(src),KR2, JR2)), KR, JR))
end


krontravargs(K::KronTrav) = K.args
function krontravargs(V::SubArray)
KR,JR = parentindices(V)
9 changes: 8 additions & 1 deletion test/test_banded.jl
Original file line number Diff line number Diff line change
@@ -1,4 +1,4 @@

using LazyBandedMatrices, LazyArrays, BandedMatrices, Test

struct PseudoBandedMatrix{T} <: AbstractMatrix{T}
data::Array{T}
@@ -67,12 +67,19 @@ LinearAlgebra.lmul!(β::Number, A::PseudoBandedMatrix) = (lmul!(β, A.data); A)
b = Vcat(randn(2), Zeros(3))
@test A*b ≈ Matrix(A)b
@test B*b ≈ Matrix(B)b

P = Vcat(randn(2,5), Zeros(3,5))
@test A*P ≈ Matrix(A)P
@test P*A ≈ P*Matrix(A)
end

@testset "Apply * Banded" begin
B = brand(5,5,2,1)
A = ApplyArray(*, B, B)
@test A * Vcat([1,2], Zeros(3)) ≈ B*B*[1,2,0,0,0]
P = Vcat(randn(2,5), Zeros(3,5))
@test A*P ≈ Matrix(A)P
@test P*A ≈ P*Matrix(A)
end

@testset "Banded Perturbed" begin