Updates readme #348
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| name: Build and test UEDGE - write wheel files if tests pass | |
| on: [push, pull_request] | |
| jobs: | |
| check-requests: | |
| name: Checks whether tests and/or wheels are requested | |
| runs-on: ubuntu-latest | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - name: Set UBUNTU tags env variables. | |
| if: runner.os == 'Linux' | |
| run: | | |
| # Set "checking" variable to false by default. | |
| # Get your last commit message, not the merge commit. | |
| text=$(git log -1 --no-merges --pretty=%B) | |
| # Read the commit message into an array split by "#". | |
| readarray -d "#" -t commit_message <<< "$text" | |
| # Sanity check. | |
| echo "Tags are: ${commit_message[1]}" | |
| # Add tags and overwrite "checking" variable to true if there are tags. | |
| if [[ "${commit_message[1]}" == *"@notest"* ]]; then | |
| echo "Seting test flags to FALSE" | |
| echo "test=FALSE" >> $GITHUB_OUTPUT | |
| else | |
| echo "Seting test flags to TRUE" | |
| echo "test=TRUE" >> $GITHUB_OUTPUT | |
| fi | |
| if [[ "${commit_message[1]}" == *"@nowheel"* ]]; then | |
| echo "Seting wheel flags to FALSE" | |
| echo "wheel=FALSE" >> $GITHUB_OUTPUT | |
| else | |
| echo "Seting wheel flags to TRUE" | |
| echo "wheel=TRUE" >> $GITHUB_OUTPUT | |
| fi | |
| run-all-tests: | |
| name: Runs test ${{ matrix.tests }} | |
| runs-on: ubuntu-latest | |
| needs: check-requests | |
| if: needs.check-requests.outputs.test != 'TRUE' | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| python-version: [3.11] | |
| tests: [fulltests, unittests/D+C, unittests/D_mols, unittests/D_only, unittests/slab_D_only] | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - name: Check branch and define test branch | |
| env: | |
| BRANCH_NAME: ${{ github.head_ref || github.ref_name }} | |
| run: | | |
| echo "Branch is:", $BRANCH_NAME | |
| if [[ ${BRANCH_NAME} == *"master"* ]]; then | |
| echo "testbranch=pytests" >> $GITHUB_ENV | |
| echo "Using pytests test branch" | |
| else | |
| echo "testbranch=pytests-develop" >> $GITHUB_ENV | |
| echo "Using pytests-develop test branch" | |
| fi | |
| - name: Echo test branch name | |
| run: | | |
| echo ${{ env.testbranch }} | |
| - name: Set up Python ${{ matrix.python-version }} | |
| uses: actions/setup-python@v5 | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| - name: Install pip dependencies | |
| run: | | |
| python -m pip install --upgrade pip | |
| python -m pip install forthon>=0.10.7 numpy==1.26.4 h5py | |
| python -m pip install flake8 | |
| python -m pip install pytest-isolate pytest-xdist | |
| - name: Build UEDGE | |
| run: | | |
| python -m pip install . -C "--build-option=--serial" | |
| - name: Switch to pytests branch | |
| uses: actions/checkout@v4 | |
| with: | |
| ref: ${{ env.testbranch }} | |
| repository: LLNL/UEDGE | |
| - name: Test with pytest | |
| run: | | |
| # Create a clean UEDGE instance for every test | |
| pytest --isolate --tb=long pytests/${{ matrix.tests }} -s | |
| build_wheels: | |
| name: Build wheels on ${{ matrix.os }} for Python ${{ matrix.pyver }} | |
| needs: [run-all-tests, check-requests] | |
| if: needs.check-requests.outputs.wheels != 'TRUE' | |
| runs-on: ${{ matrix.os }} | |
| continue-on-error: true | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| os: [ubuntu-latest, macos-13, macos-14] | |
| pyver: [cp38, cp39, cp310, cp311, cp312] | |
| steps: | |
| - name: Checks out repo | |
| uses: actions/checkout@v4 | |
| - name: Set up macOS-specific paths and libraries | |
| if: runner.os == 'macOS' | |
| run: | | |
| # Symlink the correct gfortran compiler | |
| ln -s $(brew --prefix)/bin/gfortran-13 $(brew --prefix)/bin/gfortran | |
| # Install OMP libraries | |
| brew install libomp | |
| # Link environments to env for later us with cibuildwheel | |
| echo "LIBOMPPATH=$(brew --prefix libomp)" >> $GITHUB_ENV | |
| echo "LLVMCLANG=$(brew --prefix llvm@15)" >> $GITHUB_ENV | |
| - name: Build wheels | |
| uses: pypa/[email protected] | |
| env: | |
| CIBW_BUILD: ${{matrix.pyver}}-* | |
| CIBW_SKIP: "pp37-* cp37-* *-win32 *-manylinux_i686" | |
| CIBW_ARCHS_LINUX: auto | |
| CIBW_BEFORE_BUILD: pip install numpy 'forthon>=0.10.7' 'build<0.10.0' | |
| CC: ${{ env.LLVMCLANG }}/bin/clang | |
| LDFLAGS: "-L${{env.LIBOMPPATH }}/lib" | |
| - name: Upload Artifacts | |
| uses: actions/upload-artifact@v4 | |
| with: | |
| name: cibw-wheels-${{ matrix.os }}-${{ matrix.pyver }}-${{ strategy.job-index }} | |
| path: ./wheelhouse/*.whl | |
| build_wheels_pypy: | |
| name: Build PyPy wheels on ${{ matrix.os }} | |
| if: false | |
| # if: github.event_name == 'pull_request' | |
| needs: run-all-tests | |
| runs-on: ${{ matrix.os }} | |
| continue-on-error: true | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| os: [ubuntu-latest, macos-13, macos-14] | |
| steps: | |
| - name: Checks out repo | |
| uses: actions/checkout@v4 | |
| - name: Set up macOS-specific paths and libraries | |
| if: runner.os == 'macOS' | |
| run: | | |
| # Symlink the correct gfortran compiler | |
| ln -s $(brew --prefix)/bin/gfortran-13 $(brew --prefix)/bin/gfortran | |
| # Install OMP libraries | |
| brew install libomp | |
| # Link environments to env for later us with cibuildwheel | |
| echo "LIBOMPPATH=$(brew --prefix libomp)" >> $GITHUB_ENV | |
| echo "LLVMCLANG=$(brew --prefix llvm@15)" >> $GITHUB_ENV | |
| - name: Build wheels | |
| uses: pypa/[email protected] | |
| env: | |
| CIBW_BUILD: pp* | |
| CIBW_SKIP: "pp37-* cp37-* *-win32 *-manylinux_i686" | |
| CIBW_BEFORE_BUILD: pip install numpy 'forthon>=0.10.7' 'build<0.10.0' | |
| CC: ${{ env.LLVMCLANG }}/bin/clang | |
| LDFLAGS: "-L${{env.LIBOMPPATH }}/lib" | |
| - name: Upload Artifacts | |
| uses: actions/upload-artifact@v4 | |
| with: | |
| name: cibw-wheels-pyp-${{ matrix.os }}-${{ strategy.job-index }} | |
| path: ./wheelhouse/*.whl | |
| build_wheels_cross: | |
| name: Build Linux cross-wheels | |
| if: false | |
| needs: run-all-tests | |
| runs-on: ubuntu-latest | |
| continue-on-error: true | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| pyver: [cp38, cp39, cp310, cp311, cp312] | |
| arch: [aarch64, ppc64le] | |
| steps: | |
| - name: Checks out repo | |
| uses: actions/checkout@v4 | |
| - name: Set up QEMU for multi-arch build | |
| uses: docker/setup-qemu-action@v2 | |
| - name: Build wheels | |
| uses: pypa/[email protected] | |
| env: | |
| CIBW_BUILD: ${{matrix.pyver}}-* | |
| IBW_SKIP: cp37-* | |
| CIBW_ARCHS: ${{matrix.arch}} | |
| CIBW_BEFORE_BUILD: pip install numpy 'forthon>=0.10.7' 'build<0.10.0' | |
| - name: Upload Artifacts | |
| uses: actions/upload-artifact@v4 | |
| with: | |
| name: cibw-cross-wheels-${{ matrix.arch }}-${{ matrix.pyver }}-${{ strategy.job-index }} | |
| path: ./wheelhouse/*.whl | |
| build_wheels_cross_pypy: | |
| name: Build Linux PyPy cross-wheels | |
| if: false | |
| needs: run-all-tests | |
| runs-on: ubuntu-latest | |
| continue-on-error: true | |
| strategy: | |
| fail-fast: false | |
| steps: | |
| - name: Checks out repo | |
| uses: actions/checkout@v4 | |
| - name: Set up QEMU for multi-arch build | |
| uses: docker/setup-qemu-action@v2 | |
| - name: Build wheels | |
| uses: pypa/[email protected] | |
| env: | |
| CIBW_BUILD: pp* | |
| CIBW_SKIP: "pp37-* cp37-* *-win32 *-manylinux_i686" | |
| CIBW_BEFORE_BUILD: pip install numpy 'forthon>=0.10.7' 'build<0.10.0' | |
| - name: Upload Artifacts | |
| uses: actions/upload-artifact@v4 | |
| with: | |
| name: cibw-cross-wheels-pypy-${{ strategy.job-index }} | |
| path: ./wheelhouse/*.whl | |
| gather_wheels: | |
| name: Gather built wheels | |
| needs: [build_wheels] #, build_wheels_pypy] | |
| # if: github.event_name == 'pull_request' | |
| runs-on: ubuntu-latest | |
| steps: | |
| - name: Download all Artifacts and merges them | |
| uses: actions/download-artifact@v4 | |
| with: | |
| path: wheels | |
| merge-multiple: true | |
| - name: Upload all Artifacts in a single Archive | |
| uses: actions/upload-artifact@v4 | |
| with: | |
| name: all_wheels | |
| path: wheels |