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Multi shape support#121

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JairMathAI wants to merge 1 commit intoMMV-Lab:mainfrom
JairMathAI:update/multi-shape-support
Closed

Multi shape support#121
JairMathAI wants to merge 1 commit intoMMV-Lab:mainfrom
JairMathAI:update/multi-shape-support

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@JairMathAI
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I add some helper functions to train models for a regression task with volumes of variable size , the models who support now regression task are AttentionUnet, Probabilistic Unet and I include the implementation of the nnUnet framework that support regression and in the case of segmentation it include the support of the topological regularizer terms.

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codecov-commenter commented Mar 20, 2026

Codecov Report

❌ Patch coverage is 25.76687% with 605 lines in your changes missing coverage. Please review.
✅ Project coverage is 16.49%. Comparing base (ba85ae2) to head (68c9fd5).
⚠️ Report is 34 commits behind head on main.

Files with missing lines Patch % Lines
mmv_im2im/utils/custom_transforms.py 0.00% 131 Missing ⚠️
mmv_im2im/proj_trainer_multishape.py 0.00% 90 Missing ⚠️
mmv_im2im/proj_tester.py 8.33% 77 Missing ⚠️
mmv_im2im/utils/variable_collate.py 0.00% 62 Missing ⚠️
mmv_im2im/models/pl_FCN.py 0.00% 42 Missing ⚠️
mmv_im2im/models/pl_nnUnet.py 0.00% 36 Missing ⚠️
mmv_im2im/utils/variable_datamodule.py 0.00% 35 Missing ⚠️
mmv_im2im/models/pl_ProbUnet.py 0.00% 28 Missing ⚠️
mmv_im2im/utils/gdl_regularized.py 26.08% 16 Missing and 1 partial ⚠️
mmv_im2im/utils/elbo_loss.py 36.00% 9 Missing and 7 partials ⚠️
... and 8 more
Additional details and impacted files
@@            Coverage Diff             @@
##            main     #121       +/-   ##
==========================================
+ Coverage   4.40%   16.49%   +12.08%     
==========================================
  Files         36       57       +21     
  Lines       2815     6075     +3260     
  Branches       0     1001     +1001     
==========================================
+ Hits         124     1002      +878     
- Misses      2691     4922     +2231     
- Partials       0      151      +151     

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@JairMathAI JairMathAI closed this Mar 27, 2026
@JairMathAI JairMathAI deleted the update/multi-shape-support branch March 27, 2026 17:15
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2 participants