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This bundle of shell and python scripts aims to help determine whether or not a given DL_POLY simulation has converged.

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MeganStalker/Visualise_DL_POLY_Convergence

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Visualise_DL_POLY_Convergence

This bundle of shell and python scripts aims to help determine whether or not a given DL_POLY simulation has converged.

Workflow

1. gogoconvergence.sh

  • This shell script extracts the necessary information, calls the analysis scripts and tidies up after them
  • I would store this in your bin
  • Make sure you set the path to your local clone of this repo within gogoconvergence.sh on line 22:
cp <PATH>/visualise_convergence/* .

2. energy.py

  • This python script performs basic statistical analysis and plots graphs of the fluctations of the instantaneous configurational and total energy of the system at every timestep
  • If you want to view the plots, please uncomment lines 64, 79, 122 and 137
#plt.show()

3. fluctuations.py

  • This python script performs basic statistical analysis and plots graphs of the fluctations of the instantaneous temperature and pressure of the system at every timestep
  • If you want to view the plots, please uncomment lines 64 and 99
#plt.show()

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This bundle of shell and python scripts aims to help determine whether or not a given DL_POLY simulation has converged.

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