Merge production/mlglobal.v1 branch into main

.editorconfig

@@ -0,0 +1,24 @@
+# EditorConfig helps developers define and maintain consistent
+# coding styles between different editors and IDEs
+# editorconfig.org
+
+root = true
+
+
+[*]
+end_of_line = lf
+charset = utf-8
+trim_trailing_whitespace = true
+insert_final_newline = true
+indent_style = space
+indent_size = 2
+
+[*.py]
+indent_size = 4
+
+[*.txt]
+indent_style = tab
+indent_size = 4
+
+[*.{diff}]
+trim_trailing_whitespace = false

.flake8

@@ -0,0 +1,6 @@
+[flake8]
+exclude = .git,.github,venv,__pycache__,docs/conf.py,old,build,dist
+max-line-length = 160
+per-file-ignores =
+    # imported but unused
+    __init__.py: F401

.github/ISSUE_TEMPLATE/ops_bug.yml

@@ -0,0 +1,61 @@
+name: Ops Bug Report
+description: Report something that is incorrect or broken
+labels: ["ops-bug"]
+type: "bug"
+projects: []
+assignees: []
+
+body:
+  - type: markdown
+    attributes:
+      value: |
+        Your bug may already be reported!
+        Please search on the [Issue tracker](https://github.com/NOAA-EMC/mlglobal/issues) before creating one.
+
+  - type: textarea
+    id: current_behavior
+    attributes:
+      label: What is wrong?
+      description: Give a brief description of what is incorrect or broken.
+      placeholder: |
+        Short log snippets that illustrate the problem can be included here.
+
+        For any longer logs, please create a GitHub gist (https://gist.github.com/) and link it here.
+    validations:
+      required: true
+
+  - type: textarea
+    id: expected_behavior
+    attributes:
+      label: What should have happened?
+      placeholder: Describe what you expected to happen.
+    validations:
+      required: true
+
+  - type: textarea
+    id: reproduction_steps
+    attributes:
+      label: Steps to reproduce
+      description: Please give explicit instructions to reproduce the error
+      placeholder: |
+        1.
+        2.
+        3.
+    validations:
+      required: true
+
+  - type: textarea
+    id: description
+    attributes:
+      label: Additional information
+      description: Provide context or any additional information about the bug.
+    validations:
+      required: true
+
+  - type: textarea
+    id: proposed_implementation
+    attributes:
+      label: Do you have a proposed solution?
+      description: If you already have an idea on how to fix this, please provide it here.
+      placeholder: Optional
+

.github/workflows/pynorms.yaml

@@ -0,0 +1,14 @@
+name: pynorms
+on: [workflow_dispatch]
+#on: [push, pull_request, workflow_dispatch]
+
+jobs:
+  pre-commit:
+    runs-on: ubuntu-latest
+    steps:
+      - name: Check python coding norms with pre-commit
+      - uses: actions/checkout@v4
+      - uses: actions/setup-python@v5
+        with:
+          python-version: '3.12'
+      - uses: pre-commit/action@v3.0.1

.gitignore

@@ -1,4 +1,106 @@
-*.egg*
-__pycache__
-*.swp
+# Byte-compiled / optimized / DLL files
+__pycache__/
+*.py[cod]
+*$py.class
+
+# Distribution / packaging
+.Python
+build/
+develop-eggs/
+dist/
+downloads/
+eggs/
+.eggs/
+lib/
+lib64/
+parts/
+sdist/
+var/
+wheels/
+pip-wheel-metadata/
+share/python-wheels/
+*.egg-info/
+.installed.cfg
+*.egg
+MANIFEST
+
+# Installer logs
+pip-log.txt
+pip-delete-this-directory.txt
+
+# Unit test / coverage reports
+htmlcov/
+.tox/
+.nox/
+.coverage
+.coverage.*
+.cache
+nosetests.xml
+coverage.xml
+*.cover
+*.py,cover
+.hypothesis/
+.pytest_cache/
+
+# Translations
+*.mo
+*.pot
+
+# Sphinx documentation
+docs/_build/
+
+# Jupyter Notebook
+.ipynb_checkpoints
+
+# IPython
+profile_default/
+ipython_config.py
+
+# pyenv
+.python-version
+
+# pipenv
+#   According to pypa/pipenv#598, it is recommended to include Pipfile.lock in version control.
+#   However, in case of collaboration, if having platform-specific dependencies or dependencies
+#   having no cross-platform support, pipenv may install dependencies that don't work, or not
+#   install all needed dependencies.
+#Pipfile.lock
+
+# PEP 582; used by e.g. github.com/David-OConnor/pyflow
+__pypackages__/
+
+# Environments
+.env
+.venv
+env/
+venv/
+ENV/
+env.bak/
+venv.bak/
+
+# mkdocs documentation
+/site
+
+# mypy
+.mypy_cache/
+.dmypy.json
+dmypy.json
+
+# Pyre type checker
+.pyre/
+
+# Editor backup files (Emacs, vim)
+*~
+*.sw[a-p]
+.DS_Store
+
+# Pycharm IDE files
+.idea/
+
+# VSCode files
 *vscode*
+
+# Ignore grib2 and netcdf files in the repository
+*.nc*
+*grb*
+*grib2*

.gitmodules

@@ -1,3 +1,4 @@
 [submodule "graphcast"]
-	path = graphcast
-	url = https://github.com/google-deepmind/graphcast.git
+  path = graphcast
+  url = https://github.com/noaa-emc/graphcast
+  ignore = dirty

.pre-commit-config.yaml

@@ -0,0 +1,39 @@
+repos:
+  # General pre-commit hooks for common issues
+  - repo: https://github.com/pre-commit/pre-commit-hooks
+    rev: v6.0.0 # Use the latest stable version
+    hooks:
+      - id: trailing-whitespace
+      - id: end-of-file-fixer
+      - id: check-yaml
+      - id: check-added-large-files
+      - id: check-ast
+
+  # Black formatter for consistent code style
+  - repo: https://github.com/psf/black
+    rev: 24.4.2 # Use the latest stable version
+    hooks:
+      - id: black
+        language_version: python3.12 # Specify your Python version
+        files: ^(src/|tests/)
+        exclude: ^(oper/|graphcast/|training/)
+
+  # Flake8 linter for style guide enforcement and error checking
+  - repo: https://github.com/PyCQA/flake8
+    rev: 7.1.0 # Use the latest stable version
+    hooks:
+      - id: flake8
+        name: flake8
+        entry: flake8
+        files: ^(src/|tests/)
+        exclude: ^(oper/|graphcast/|training/)
+
+  # isort for sorting imports alphabetically and separating them into sections
+  - repo: https://github.com/PyCQA/isort
+    rev: 6.0.1 # Use the latest stable version
+    hooks:
+      - id: isort
+        name: isort (python)
+        args: ["--profile", "black"] # Use the black profile for compatibility
+        files: ^(src/|tests/)
+        exclude: ^(oper/|graphcast/|training/)

LICENSE.md

@@ -0,0 +1,41 @@
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