Update TimerOutputs requirement from 0.5.25 to 0.5.25, 1.0 in the all-julia-dependencies group across 1 directory

[dependabot]

Updates the requirements on TimerOutputs to permit the latest version.
Updates TimerOutputs to 1.0.1

Release notes

Sourced from TimerOutputs's releases.

v1.0.1

TimerOutputs v1.0.1

Diff since v1.0.0

Merged pull requests:

• tweak printing of sections with 0 allocations (#226) (@​KristofferC)

Changelog

Sourced from TimerOutputs's changelog.

TimerOutputs changelog

Version 1.0.0

TimerOutputs 1.0.0 is a rewrite of the package internals with a number of new features. The documented API keeps working; code that relied on undocumented internals may need updating (see "Internal changes" below).

New features

• Zero-overhead timer disabling: the new NoTimerOutput is a dummy timer where all operations are no-ops. When its type is known to the compiler (a const, or a type parameter of the struct holding it), @timeit sections compile away entirely — a per-timer alternative to @timeit_debug. Runtime-disabled regular timers also became ~10x cheaper (~1.4 ns per section).
• Tables.jl interface: timers are tables — DataFrame(to), CSV.write("timings.csv", to) and any other Tables.jl consumer work directly, with one row per section holding the raw measurements (path, section, depth, ncalls, time_ns, gc_time_ns, allocated_bytes, firstexec_ns).
• New table layout (now built on PrettyTables.jl): tree guides (├─, └─) instead of plain indentation, and an optional %par column showing each section's share of its enclosing section (columns = [..., :time_par]).
• Heat bars: the default table shows a small bar per section visualizing its share of the total time / allocations, colored from blue (cheap) to red (expensive) in color-capable terminals. Displaying a subsection rescales the bars to that subsection's total. Hide them with bars = false (compact = true also drops them), or select them explicitly through the columns keyword (:time_bar, :allocs_bar).
• Column selection: print_timer(to; columns = [:ncalls, :time, :time_pct]) picks exactly which columns to show, in order; allocations and compact remain as shorthands.
• GC time column: print_timer(to; gc = true) (or the :gc_time column) adds a column with the time spent in garbage collection within each section. Off by default. Also available programmatically as TimerOutputs.gctime(to).
• Call shorthand: @timeit to foo(args) times the call under a label derived from the callee (here "foo"), a shorthand for @timeit to "foo" foo(args). Works with the default timer too (@timeit foo(args)). Qualified calls keep their qualification (Mod.foo → "Mod.foo"); operators and other non-name calls still need an explicit label.
• @timed_testset: a drop-in replacement for Test.@testset that times each set (nested sets nest in the timer), so print_timer() after the tests shows where the test time went. Test stays a non-dependency; the emitted @testset is resolved at the call site.
• Recursive debug timings: enable_debug_timings/disable_debug_timings now recurse into submodules by default, so one call on a package's top module instruments the whole package (#75). Pass recursive = false for the old single-module behavior.

... (truncated)

Commits

• fe50905 Bump version from 1.0.0 to 1.0.1
• 84ed9fd tweak printing of sections with 0 allocations (#226)
• 2b20568 update version in CHANGELOG
• 6d2bfac make debug timeit recursive (#224)
• e1e8de8 Bump version from 0.5.30 to 1.0.0 (#225)
• 510aa26 add @​timed_testset, a timed drop-in for Test.@​testset (#223)
• d058753 allow one to directly time a call, using the call as the section name (#222)
• 1283939 add possibility of seeing GC percentage (default to off) (#221)
• c7352cc Add "heat" bar columns to the table (#220)
• a30c677 improve rendering of @timeit_all (#219)
• Additional commits viewable in compare view

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[github-actions]

Benchmark Results (Julia v1.10)

Time benchmarks

	main	0ab17a4...	main / 0ab17a4...
bbm_1d/bbm_1d_basic.jl - rhs!:	13.8 ± 0.33 μs	13.7 ± 0.31 μs	1.01 ± 0.033
bbm_1d/bbm_1d_fourier.jl - rhs!:	0.529 ± 0.012 ms	0.531 ± 0.011 ms	0.995 ± 0.031
bbm_bbm_1d/bbm_bbm_1d_basic_reflecting.jl - rhs!:	0.0798 ± 0.00024 ms	0.0795 ± 0.00026 ms	1 ± 0.0045
bbm_bbm_1d/bbm_bbm_1d_dg.jl - rhs!:	0.0353 ± 0.00068 ms	0.0345 ± 0.00062 ms	1.02 ± 0.027
bbm_bbm_1d/bbm_bbm_1d_relaxation.jl - rhs!:	27.3 ± 0.51 μs	27.3 ± 0.52 μs	1 ± 0.027
bbm_bbm_1d/bbm_bbm_1d_upwind_relaxation.jl - rhs!:	0.0486 ± 0.00072 ms	0.049 ± 0.00075 ms	0.992 ± 0.021
hyperbolic_serre_green_naghdi_1d/hyperbolic_serre_green_naghdi_dingemans.jl - rhs!:	4.24 ± 0.05 μs	4.27 ± 0.04 μs	0.993 ± 0.015
kdv_1d/kdv_1d_basic.jl - rhs!:	1.49 ± 0.05 μs	1.39 ± 0.03 μs	1.07 ± 0.043
kdv_1d/kdv_1d_implicit.jl - rhs!:	1.4 ± 0.029 μs	1.32 ± 0.01 μs	1.06 ± 0.023
serre_green_naghdi_1d/serre_green_naghdi_well_balanced.jl - rhs!:	0.208 ± 0.011 ms	0.206 ± 0.011 ms	1.01 ± 0.075
svaerd_kalisch_1d/svaerd_kalisch_1d_dingemans_relaxation.jl - rhs!:	0.15 ± 0.0072 ms	0.149 ± 0.0061 ms	1 ± 0.063
time_to_load	2.37 ± 0.0012 s	2.54 ± 0.014 s	0.932 ± 0.0051

Memory benchmarks

	main	0ab17a4...	main / 0ab17a4...
bbm_1d/bbm_1d_basic.jl - rhs!:	1 allocs: 4.12 kB	1 allocs: 4.12 kB	1
bbm_1d/bbm_1d_fourier.jl - rhs!:	1 allocs: 4.12 kB	1 allocs: 4.12 kB	1
bbm_bbm_1d/bbm_bbm_1d_basic_reflecting.jl - rhs!:	5 allocs: 1.17 kB	5 allocs: 1.17 kB	1
bbm_bbm_1d/bbm_bbm_1d_dg.jl - rhs!:	10 allocs: 8.62 kB	10 allocs: 8.62 kB	1
bbm_bbm_1d/bbm_bbm_1d_relaxation.jl - rhs!:	2 allocs: 8.25 kB	2 allocs: 8.25 kB	1
bbm_bbm_1d/bbm_bbm_1d_upwind_relaxation.jl - rhs!:	2 allocs: 8.25 kB	2 allocs: 8.25 kB	1
hyperbolic_serre_green_naghdi_1d/hyperbolic_serre_green_naghdi_dingemans.jl - rhs!:	0 allocs: 0 B	0 allocs: 0 B
kdv_1d/kdv_1d_basic.jl - rhs!:	0 allocs: 0 B	0 allocs: 0 B
kdv_1d/kdv_1d_implicit.jl - rhs!:	0 allocs: 0 B	0 allocs: 0 B
serre_green_naghdi_1d/serre_green_naghdi_well_balanced.jl - rhs!:	0.075 k allocs: 0.66 MB	0.075 k allocs: 0.66 MB	1
svaerd_kalisch_1d/svaerd_kalisch_1d_dingemans_relaxation.jl - rhs!:	0.042 k allocs: 0.315 MB	0.042 k allocs: 0.315 MB	1
time_to_load	0.153 k allocs: 14.5 kB	0.153 k allocs: 14.5 kB	1

[codecov-commenter]

Codecov Report

✅ All modified and coverable lines are covered by tests.

📢 Thoughts on this report? Let us know!

[JoshuaLampert]

We need to wait for trixi-framework/TrixiBase.jl#74.

[coveralls]

Coverage Report for CI Build 30716467405

Coverage remained the same at 98.483%

Details

• Coverage remained the same as the base build.
• Patch coverage: No coverable lines changed in this PR.
• No coverage regressions found.

Uncovered Changes

No uncovered changes found.

Coverage Regressions

No coverage regressions found.

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Coverage Stats

Relevant Lines:	2571
Covered Lines:	2532
Line Coverage:	98.48%
Coverage Strength:	8193162.32 hits per line

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💛 - Coveralls

[JoshuaLampert]

We need to wait for SciML/NonlinearSolve.jl#1127.

[JoshuaLampert]

CI uses TimerOutputs.jl v1 now. The final output now looks different, but I like it. What do you think, @ranocha?

[ranocha]

LGTM 👍