[TASK] Merge Release Diff #1626
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Co-authored-by: sourcery-ai[bot] <58596630+sourcery-ai[bot]@users.noreply.github.com>
1219 daps bug gitlab ci gcs log
Remove nested docs.
* Run core server as datafed user not as root user. * feat: fix group to root group and set strict security options in compose file * docs: update instructions for running datafed-core container.
* refactor: remove system secret from http params. * style: Formatted the generate scripts * fix: revert protobuf submodule to what is in dev. --------- Co-authored-by: JoshuaSBrown <[email protected]>
…o-end testing (#1598) * feat:Added a central variable within the end to end tests for configurable timeout times. * fix: Fixed the initialization fo the timeouts within the end to end tests * style: remove ';' from python it is not needed. Co-authored-by: Copilot <[email protected]> --------- Co-authored-by: Joshua S Brown <[email protected]> Co-authored-by: Copilot <[email protected]>
* style: Formatted globus scripts
* style: Formatted run scripts
* refactor: remove system secret from http params. * refactor: remove system secret from web, from client, from scrips and from tests.
* style: Removed non helpful logs from tasks.js * style:formatted tasks.js
* style: Formatted uninstall and utils scripts
* style: Formatted the install scripts Co-authored-by: Joshua S Brown <[email protected]>
* style: Formatted all remaining scripts within core * style: Formatted all remaining scripts within common * style: Formatted all scripts within compose folder * style: Formatting remaining scripts within DataFed
* refactor: run docker foxx with unpriviledged user. * docs: update documentation on running foxx. * fix: add security flags to end to end runs, and add group write permissions to folders. * fix: add .gitlab contents to rules for building foxx image. * fix: make datafed.sh writable if it is leftover from Dockerfile.dependencies * fix: improve performance of docker build by scoping permission changes. * fix: add additional permissions to folders for foxx install * fix: cleanup pre existing cmake generated files. * feat: add support for https in install_foxx, as well as detection of unsafe certs. * feat: support running foxx container on OpenShift with limited permissions, and with ssl enabled. * feat: run core server container longer on startup before failing on failed database connection. * fix: prevent configuring proto files if only using foxx. * tests: add foxx setup scripts, and grant execution mode. * fix: add BUILD_WEB as part of the conditions for configuring the version.prot file. * fix: add nvm folder to set of folders that require permissions changes. * style: fix shell formatting of entrypoint_foxx and install_foxx.sh
* [TASK] Add CI cleanup for shell and js * [TASK] Utilize https://www.conventionalcommits.org/en/v1.0.0/ for @JoshuaSBrown
* added initial versions of scripts to support generating docker scripts * updated container scripts * chore: Auto-format shell scripts with shfmt --------- Co-authored-by: Joshua S Brown <[email protected]>
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