updates doc and version info

SPECFEM · Mar 21, 2023 · cf397e2 · cf397e2
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diff --git a/doc/USER_MANUAL/authors.tex b/doc/USER_MANUAL/authors.tex
@@ -19,7 +19,9 @@ \section*{Authors}
 Dmitry Alexeev,
 Jean-Paul (Pablo) Ampuero,
 Kazuto Ando,
+\'Etienne Bachmann
 Kangchen Bai,
+Wolfgang Bangerth,
 Piero Basini,
 Stephen Beller,
 C\'eline Blitz,
@@ -28,12 +30,16 @@ \section*{Authors}
 Emanuele Casarotti,
 Joseph Charles,
 Min Chen,
+Caio Ciardelli,
 Paul Cristini,
 Congyue Cui,
 Cl\'ement Durochat,
+Armando Espindola-Carmona,
 Percy Galvez,
+Rene Gassm\"oller,
 Hom Nath Gharti,
 Dominik G\"oddeke,
+Sunny Gogar,
 Leopold Grinberg,
 Vala Hj\"orleifsd\'ottir,
 Elodie Kendall,
@@ -44,6 +50,7 @@ \section*{Authors}
 Nicolas Le Goff,
 Pieyre Le Loher,
 Matthieu Lefebvre,
+Wenjie Lei,
 Qinya Liu,
 Youshan Liu,
 David Luet,
@@ -52,6 +59,7 @@ \section*{Authors}
 Federica Magnoni,
 Roland Martin,
 Ren\'e Matzen,
+Amanda McPherson,
 Dennis McRitchie,
 Jean-Fran\c{c}ois M\'ehaut,
 Matthias Meschede,
@@ -61,21 +69,26 @@ \section*{Authors}
 Vadim Monteiller,
 Surendra Nadh Somala,
 Tarje Nissen-Meyer,
+Andy Nowacki,
 Ridvan Orsvuran,
 Laura Parisi,
 Daniel Peter,
+Norbert Podhorszki,
 Kevin Pouget,
 Max Rietmann,
 Vittorio Ruggiero,
 Elliott Sales de Andrade,
 Brian Savage,
+Malte Schirwon,
 Bernhard Schuberth,
 Anne Sieminski,
 James Smith,
 Leif Strand,
+Kai Tao,
 Carl Tape,
 Jeroen Tromp,
 Seiji Tsuboi,
+Eduardo Valero Cano,
 Brice Videau,
 Jean-Pierre Vilotte,
 Zhinan Xie,

diff --git a/doc/USER_MANUAL/copyright_and_version.tex b/doc/USER_MANUAL/copyright_and_version.tex
@@ -18,70 +18,105 @@ \chapter*{Copyright}\label{cha:Copyright}
 \noindent
 \textbf{\underline{Evolution of the code:}}\newline
 
- v. 7.0, many developers, January 2015:
+ version 8.0, March 2023:
+   Wolfgang Bangerth, Stephen Beller, Ebru Bozdag, Caio Ciardelli, Congyue Cui, Armando Espindola-Carmona,
+   Rene Gassmoeller, Sunny Gogar, Leopold Grinberg, Elodie Kendall, Wenjie Lei, Amanda McPherson, Ridvan Orsvuran,
+   Daniel Peter, Norbert Podhorszki, Eduardo Valero Cano.
+     support for new Earth, Moon \& Mars models; ADIOS2 file I/O support, GLL models for azimuthal anisotropy \& Q,
+     LDDRK on GPU support, Laplacian smoothing, monochromatic source time functions, sponge absorbing boundaries,
+     steady-state kernels; mesh cut-off, seismogram down-sampling, non-static compilation.\newline
+
+ version 7.0.2, July 2019:
+   Kazuto Ando, Etienne Bachmann, Hom Nath Gharti, Matthieu Lefebvre, Wenjie Lei, Dimitri Komatitsch, Andy Nowacki,
+   Daniel Peter, Elliott Sales de Andrade, Malte Schirwon, James Smith, Kai Tao, Brice Videau, Victor (@MisterFruits).
+     code improvements for adjoint reader for ASDF, CUDA and OpenCL, LDDRK, OpenMP and loop performance for compute forces,
+     undo attenuation, BOAST kernels; support for full SH models, LIBXSMM, point force sources.\newline
+
+ version 7.0.1, July 2015:
+   Matthieu Lefebvre, Dimitri Komatitsch, Daniel Peter, Elliott Sales de Andrade, James Smith.
+     code improvements (performance for noise simulations, ASDF provenance); updates examples.\newline
+
+ version 7.0, January 2015:
+   many developers.
      simultaneous MPI runs, ADIOS file I/O support, ASDF seismograms, new seismogram names, tomography tools,
      CUDA and OpenCL GPU support, CEM model support, updates AK135 model, binary topography files,
      fixes geocentric/geographic conversions, updates ellipticity and gravity factors, git versioning system.\newline
 
- v. 6.0, Daniel Peter (ETH Z\"urich, Switzerland), Dimitri Komatitsch and Zhinan Xie (CNRS / University of Marseille, France),
-     Elliott Sales de Andrade (University of Toronto, Canada), and many others, in particular from Princeton University, USA,
-     April 2014:
+ version 6.0, April 2014:
+   Daniel Peter (ETH Z\"urich, Switzerland), Dimitri Komatitsch and Zhinan Xie (CNRS / University of Marseille, France),
+   Elliott Sales de Andrade (University of Toronto, Canada), and many others, in particular from Princeton University, USA.
      more flexible MPI implementation, GPU support, exact undoing of attenuation, LDDRK4-6 higher-order time scheme, etc...\newline
 
- v. 5.1, Dimitri Komatitsch, University of Toulouse, France and Ebru Bozdag, Princeton University, USA, February 2011:
+ version 5.1, February 2011:
+   Dimitri Komatitsch, University of Toulouse, France and Ebru Bozdag, Princeton University, USA.
      non blocking MPI for much better scaling on large clusters;
      new convention for the name of seismograms, to conform to the IRIS standard;
      new directory structure.\newline
 
- v. 5.0, many developers, February 2010:
-     new Moho mesh stretching honoring crust2.0 Moho depths,
+ version 5.0, February 2010:
+   many developers.
+     new moho mesh stretching honoring crust2.0 moho depths,
      new attenuation assignment, new SAC headers, new general crustal models,
      faster performance due to Deville routines and enhanced loop unrolling,
-     slight changes in code structure (see also trivia at program start).\newline
-
- v. 4.0 David Mich\'ea and Dimitri Komatitsch, University of Pau, France, February 2008:
-      first port to GPUs using CUDA, new doubling brick in the mesh, new perfectly load-balanced mesh,
-      more flexible routines for mesh design, new inflated central cube
-      with optimized shape, far fewer mesh files saved by the mesher,
-      global arrays sorted to speed up the simulation, seismograms can be
-      written by the main process, one more doubling level at the bottom
-      of the outer core if needed (off by default).\newline
-
- v. 3.6 Many people, many affiliations, September 2006:
-      adjoint and kernel calculations, fixed IASP91 model,
-      added AK135F\_NO\_MUD and 1066a, fixed topography/bathymetry routine,
-      new attenuation routines, faster and better I/Os on very large
-      systems, many small improvements and bug fixes, new `configure'
-      script, new Pyre version, new user's manual etc..\newline
-
- v. 3.5 Dimitri Komatitsch, Brian Savage and Jeroen Tromp, Caltech, July 2004:
-      any size of chunk, 3D attenuation, case of two chunks,
-      more precise topography/bathymetry model, new Par\_file structure.\newline
-
- v. 3.4 Dimitri Komatitsch and Jeroen Tromp, Caltech, August 2003:
-      merged global and regional codes, no iterations in fluid, better movies.\newline
-
- v. 3.3 Dimitri Komatitsch, Caltech, September 2002:
-      flexible mesh doubling in outer core, inlined code, OpenDX support.\newline
-
- v. 3.2 Jeroen Tromp, Caltech, July 2002:
-      multiple sources and flexible PREM reading.\newline
-
- v. 3.1 Dimitri Komatitsch, Caltech, June 2002:
-      vectorized loops in solver and merged central cube.\newline
-
- v. 3.0 Dimitri Komatitsch and Jeroen Tromp, Caltech, May 2002:
-   ported to SGI and Compaq, double precision solver, more general anisotropy.\newline
-
- v. 2.3 Dimitri Komatitsch and Jeroen Tromp, Caltech, August 2001:
-                       gravity, rotation, oceans and 3-D models.\newline
-
- v. 2.2 Dimitri Komatitsch and Jeroen Tromp, Caltech, USA, March 2001:
-                       final MPI package.\newline
-
- v. 2.0 Dimitri Komatitsch, Harvard, USA, January 2000: MPI code for the globe.\newline
-
- v. 1.0 Dimitri Komatitsch, UNAM, Mexico, June 1999: first MPI code for a chunk.\newline
+     slight changes in code structure.\newline
+
+ version 4.0, February 2008:
+   David Mich\'ea and Dimitri Komatitsch, University of Pau, France.
+     first port to GPUs using CUDA, new doubling brick in the mesh, new perfectly load-balanced mesh,
+     more flexible routines for mesh design, new inflated central cube
+     with optimized shape, far fewer mesh files saved by the mesher,
+     global arrays sorted to speed up the simulation, seismos can be
+     written by the main process, one more doubling level at the bottom
+     of the outer core if needed (off by default).\newline
+
+ version 3.6, September 2006:
+   Many people, many affiliations.
+     adjoint and kernel calculations, fixed IASP91 model,
+     added AK135 and 1066a, fixed topography/bathymetry routine,
+     new attenuation routines, faster and better I/Os on very large
+     systems, many small improvements and bug fixes, new "configure"
+     script, new user's manual etc.\newline
+
+ version 3.5, July 2004:
+   Dimitri Komatitsch, Brian Savage and Jeroen Tromp, Caltech.
+     any size of chunk, 3D attenuation, case of two chunks,
+     more precise topography/bathymetry model, new Par\_file structure.\newline
+
+ version 3.4, August 2003:
+   Dimitri Komatitsch and Jeroen Tromp, Caltech.
+     merged global and regional codes, no iterations in fluid, better movies.\newline
+
+ version 3.3, September 2002:
+   Dimitri Komatitsch, Caltech.
+     flexible mesh doubling in outer core, inlined code, OpenDX support.\newline
+
+ version 3.2, July 2002:
+   Jeroen Tromp, Caltech.
+     multiple sources and flexible PREM reading.\newline
+
+ version 3.1, June 2002:
+   Dimitri Komatitsch, Caltech.
+     vectorized loops in solver and merged central cube.\newline
+
+ version 3.0, May 2002:
+   Dimitri Komatitsch and Jeroen Tromp, Caltech.
+     ported to SGI and Compaq, double precision solver, more general anisotropy.\newline
+
+ version 2.3, August 2001:
+   Dimitri Komatitsch and Jeroen Tromp, Caltech.
+     gravity, rotation, oceans and 3-D models.\newline
+
+ version 2.2, March 2001:
+   Dimitri Komatitsch and Jeroen Tromp, Caltech, USA.
+     final MPI package.\newline
+
+ version 2.0, January 2000:
+   Dimitri Komatitsch, Harvard, USA.
+     MPI code for the globe.\newline
+
+ version 1.0, June 1999:
+   Dimitri Komatitsch, UNAM, Mexico.
+     first MPI code for a chunk.\newline
 
  Jeroen Tromp and Dimitri Komatitsch, Harvard, USA, July 1998: first chunk solver using OpenMP on a Sun machine.\newline
 

diff --git a/doc/USER_MANUAL/features.tex b/doc/USER_MANUAL/features.tex
@@ -46,7 +46,7 @@ \chapter*{Simulation features supported in SPECFEM3D\_GLOBE}
 & & & & & \\
 %%
 {\bf Time schemes}  & Newmark   & X  & X  & X  & X \\
-                    & LDDRK     & X  & -  & -  & - \\
+                    & LDDRK     & X  & X  & X  & X \\
 \hline
 & & & & & \\
 %%

diff --git a/doc/USER_MANUAL/manual_SPECFEM3D_GLOBE.pdf b/doc/USER_MANUAL/manual_SPECFEM3D_GLOBE.pdf
diff --git a/doc/USER_MANUAL/manual_SPECFEM3D_GLOBE.tex b/doc/USER_MANUAL/manual_SPECFEM3D_GLOBE.tex
@@ -139,7 +139,7 @@
 %
 \author{$\copyright$ Princeton University (USA) and CNRS / University of Marseille (France),\\
 ETH Z\"urich (Switzerland),\\
-Version 8 . 0
+Version 8.0
 }
 
 % date of last edit

diff --git a/src/meshfem3D/meshfem3D.f90 b/src/meshfem3D/meshfem3D.f90
@@ -130,7 +130,7 @@ program xmeshfem3D
 ! number = 1,
 ! doi={10.1046/j.1365-246X.2002.01716.x}}
 !
-! and/or another article from http://web.univ-pau.fr/~dkomati1/publications.html
+! and/or another article from https://specfem.org/komatitsch.free.fr/publications.html
 !
 !
 ! If you use the kernel capabilities of the code, please cite at least one article
@@ -206,109 +206,6 @@ program xmeshfem3D
 ! To report bugs or suggest improvements to the code, please use our online
 ! Issues tracking system at https://github.com/SPECFEM/specfem3d_globe/ .
 !
-! Evolution of the code:
-! ---------------------
-!
-! v. 8.0, many developers, September 2020:
-!     support for new earth, moon & mars models, ADIOS2 file I/O support, GLL models for azimuthal anisotropy & Q,
-!     LDDRK on GPU support, Laplacian smoothing, monochromatic source time functions.
-!
-! v. 7.0, many developers, January 2015:
-!     simultaneous MPI runs, ADIOS file I/O support, ASDF seismograms, new seismogram names, tomography tools,
-!     CUDA and OpenCL GPU support, CEM model support, updates AK135 model, binary topography files,
-!     fixes geocentric/geographic conversions, updates ellipticity and gravity factors, git versioning system.
-!
-! v. 6.0, Daniel Peter (ETH Z\"urich, Switzerland), Dimitri Komatitsch and Zhinan Xie (CNRS / University of Marseille, France),
-!     Elliott Sales de Andrade (University of Toronto, Canada), and many others, in particular from Princeton University, USA,
-!     April 2014:
-!     more flexible MPI implementation, GPU support, exact undoing of attenuation, LDDRK4-6 higher-order time scheme, etc...
-!
-! v. 5.1, Dimitri Komatitsch, University of Toulouse, France and Ebru Bozdag, Princeton University, USA, February 2011:
-!     non blocking MPI for much better scaling on large clusters;
-!     new convention for the name of seismograms, to conform to the IRIS standard;
-!     new directory structure
-!
-! v. 5.0, many developers, February 2010:
-!     new moho mesh stretching honoring crust2.0 moho depths,
-!     new attenuation assignment, new SAC headers, new general crustal models,
-!     faster performance due to Deville routines and enhanced loop unrolling,
-!     slight changes in code structure
-!
-! v. 4.0 David Michea and Dimitri Komatitsch, University of Pau, France, February 2008:
-!      first port to GPUs using CUDA, new doubling brick in the mesh, new perfectly load-balanced mesh,
-!      more flexible routines for mesh design, new inflated central cube
-!      with optimized shape, far fewer mesh files saved by the mesher,
-!      global arrays sorted to speed up the simulation, seismos can be
-!      written by the main process, one more doubling level at the bottom
-!      of the outer core if needed (off by default)
-!
-! v. 3.6 Many people, many affiliations, September 2006:
-!      adjoint and kernel calculations, fixed IASP91 model,
-!      added AK135 and 1066a, fixed topography/bathymetry routine,
-!      new attenuation routines, faster and better I/Os on very large
-!      systems, many small improvements and bug fixes, new "configure"
-!      script, new user's manual etc.
-!
-! v. 3.5 Dimitri Komatitsch, Brian Savage and Jeroen Tromp, Caltech, July 2004:
-!      any size of chunk, 3D attenuation, case of two chunks,
-!      more precise topography/bathymetry model, new Par_file structure
-!
-! v. 3.4 Dimitri Komatitsch and Jeroen Tromp, Caltech, August 2003:
-!      merged global and regional codes, no iterations in fluid, better movies
-!
-! v. 3.3 Dimitri Komatitsch, Caltech, September 2002:
-!      flexible mesh doubling in outer core, inlined code, OpenDX support
-!
-! v. 3.2 Jeroen Tromp, Caltech, July 2002:
-!      multiple sources and flexible PREM reading
-!
-! v. 3.1 Dimitri Komatitsch, Caltech, June 2002:
-!      vectorized loops in solver and merged central cube
-!
-! v. 3.0 Dimitri Komatitsch and Jeroen Tromp, Caltech, May 2002:
-!   ported to SGI and Compaq, double precision solver, more general anisotropy
-!
-! v. 2.3 Dimitri Komatitsch and Jeroen Tromp, Caltech, August 2001:
-!                       gravity, rotation, oceans and 3-D models
-!
-! v. 2.2 Dimitri Komatitsch and Jeroen Tromp, Caltech, USA, March 2001:
-!                       final MPI package
-!
-! v. 2.0 Dimitri Komatitsch, Harvard, USA, January 2000: MPI code for the globe
-!
-! v. 1.0 Dimitri Komatitsch, UNAM, Mexico, June 1999: first MPI code for a chunk
-!
-! Jeroen Tromp and Dimitri Komatitsch, Harvard, USA, July 1998: first chunk solver using OpenMP on a Sun machine
-!
-! Dimitri Komatitsch, IPG Paris, France, December 1996: first 3-D solver for the CM-5 Connection Machine,
-!    parallelized on 128 processors using Connection Machine Fortran
-!
-! From Dahlen and Tromp (1998):
-! ----------------------------
-!
-! Gravity is approximated by solving eq (3.259) without the Phi_E' term
-! The ellipsoidal reference model is that of section 14.1
-! The transversely isotropic expression for PREM is that of eq (8.190)
-!
-! Formulation in the fluid (acoustic) outer core:
-! -----------------------------------------------
-!
-! In case of an acoustic medium, a displacement potential Chi is used
-! as in Chaljub and Valette, Geophysical Journal International, vol. 158,
-! p. 131-141 (2004) and *NOT* a velocity potential as in Komatitsch and Tromp,
-! Geophysical Journal International, vol. 150, p. 303-318 (2002).
-! This permits acoustic-elastic coupling based on a non-iterative time scheme.
-! Displacement if we ignore gravity is then: u = grad(Chi)
-! (In the context of the Cowling approximation displacement is
-! u = grad(rho * Chi) / rho, *not* u = grad(Chi).)
-! Velocity is then: v = grad(Chi_dot)       (Chi_dot being the time derivative of Chi)
-! and pressure is: p = - rho * Chi_dot_dot  (Chi_dot_dot being the time second derivative of Chi).
-! The source in an acoustic element is a pressure source.
-! The potential in the outer core is called displ_outer_core for simplicity.
-! Its first time derivative is called veloc_outer_core.
-! Its second time derivative is called accel_outer_core.
-
-
 
 ! ************** PROGRAM STARTS HERE **************