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Add QuarantineEffectiveness struct and validation check #1282

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@xsaschako xsaschako commented May 19, 2025

Changes and Information

Please briefly list the changes (main added features, changed items, or corrected bugs) made:

  • Add Parameter

If need be, add additional information and what the reviewer should look out for in particular:

Merge Request - Guideline Checklist

Please check our git workflow. Use the draft feature if the Pull Request is not yet ready to review.

Checks by code author

  • Every addressed issue is linked (use the "Closes #ISSUE" keyword below)
  • New code adheres to coding guidelines
  • No large data files have been added (files should in sum not exceed 100 KB, avoid PDFs, Word docs, etc.)
  • Tests are added for new functionality and a local test run was successful (with and without OpenMP)
  • Appropriate documentation for new functionality has been added (Doxygen in the code and Markdown files if necessary)
  • Proper attention to licenses, especially no new third-party software with conflicting license has been added
  • (For ABM development) Checked benchmark results and ran and posted a local test above from before and after development to ensure performance is monitored.

Checks by code reviewer(s)

  • Corresponding issue(s) is/are linked and addressed
  • Code is clean of development artifacts (no deactivated or commented code lines, no debugging printouts, etc.)
  • Appropriate unit tests have been added, CI passes, code coverage and performance is acceptable (did not decrease)
  • No large data files added in the whole history of commits(files should in sum not exceed 100 KB, avoid PDFs, Word docs, etc.)
  • On merge, add 2-5 lines with the changes (main added features, changed items, or corrected bugs) to the merge-commit-message. This can be taken from the briefly-list-the-changes above (best case) or the separate commit messages (worst case).

@xsaschako xsaschako linked an issue May 19, 2025 that may be closed by this pull request
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@xsaschako xsaschako marked this pull request as ready for review May 19, 2025 10:28
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codecov bot commented May 19, 2025

Codecov Report

Attention: Patch coverage is 52.94118% with 8 lines in your changes missing coverage. Please review.

Project coverage is 97.18%. Comparing base (c7f439d) to head (e92d880).

Files with missing lines Patch % Lines
cpp/models/abm/model_functions.cpp 33.33% 6 Missing ⚠️
cpp/models/abm/parameters.h 71.42% 2 Missing ⚠️
Additional details and impacted files
@@            Coverage Diff             @@
##             main    #1282      +/-   ##
==========================================
- Coverage   97.21%   97.18%   -0.04%     
==========================================
  Files         156      156              
  Lines       14674    14686      +12     
==========================================
+ Hits        14266    14272       +6     
- Misses        408      414       +6     

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Quarantine Effectiveness
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