Skip to content
@SindiLab

Sindi Lab (University of California, Merced)

The Sindi Lab focuses on mathematical and computational modeling of complex biological processes using applied mathematics methods and machine learning.

Pinned Loading

  1. Deep-Learning-in-Spatial-Transcriptomics-Analysis Deep-Learning-in-Spatial-Transcriptomics-Analysis Public

    This repository will host a (continously updated) list of various deep learning methods used in different stages of spatial transcriptomics analysis.

    33 2

  2. ACTIVA ACTIVA Public

    The main repository for ACTIVA: realistic single-cell RNA-seq generation with automatic cell-type identification using introspective variational autoencoders

    Python 11 6

  3. ACTINN-PyTorch ACTINN-PyTorch Public

    An easy-to-use PyTorch implementation of Automatic Cell-Types Identification of single-cell RNA sequencing using Neural Networks (ACTINN)

    Python 6 4

  4. scANNA scANNA Public

    The main repository hosting the implementation of scANNA (single-cell ANalysis using Neural Attention)

    Python 4 1

  5. Tutorials Tutorials Public

    This Repository will host basic Tutorial for getting started with SingleCell Analysis in Python

    HTML 5 1

  6. N-ACT N-ACT Public

    The public repository for N-ACT: An Interpretable Deep Learning Model for Automatic Cell Type and Salient Gene Identification

    Python 2 1

Repositories

Showing 10 of 10 repositories

Top languages

Loading…

Most used topics

Loading…