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Rename Display Pyramid to Pyramidal Downsampling and align pyramid outputs #13

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Merged
AdvancedImagingUTSW merged 4 commits into from
Mar 22, 2026

Display pyramid: add per-level progress updates and chunk-estimate lo…

8abebea
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Merged

Rename Display Pyramid to Pyramidal Downsampling and align pyramid outputs #13

Display pyramid: add per-level progress updates and chunk-estimate lo…
8abebea
Select commit
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Codecov / codecov/project succeeded Mar 21, 2026 in 0s

49.05% (+0.55%) compared to 4aa8805

View this Pull Request on Codecov

49.05% (+0.55%) compared to 4aa8805

Details

Codecov Report

❌ Patch coverage is 56.91120% with 558 lines in your changes missing coverage. Please review.
✅ Project coverage is 49.05%. Comparing base (4aa8805) to head (8abebea).

Files with missing lines Patch % Lines
src/clearex/gui/app.py 1.43% 344 Missing ⚠️
src/clearex/registration/pipeline.py 76.37% 172 Missing ⚠️
src/clearex/visualization/pipeline.py 84.84% 15 Missing ⚠️
src/clearex/main.py 60.00% 10 Missing ⚠️
src/clearex/workflow.py 87.80% 5 Missing ⚠️
src/clearex/flatfield/pipeline.py 81.81% 4 Missing ⚠️
src/clearex/mip_export/pipeline.py 40.00% 3 Missing ⚠️
src/clearex/filter/kernels.py 0.00% 1 Missing ⚠️
src/clearex/io/experiment.py 91.66% 1 Missing ⚠️
src/clearex/preprocess/pad.py 0.00% 1 Missing ⚠️
... and 2 more
Additional details and impacted files 
@@            Coverage Diff             @@
##             main      #13      +/-   ##
==========================================
+ Coverage   48.50%   49.05%   +0.55%     
==========================================
  Files          49       50       +1     
  Lines       16173    17377    +1204     
==========================================
+ Hits         7844     8525     +681     
- Misses       8329     8852     +523

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