Submit tasks as job arrays and fix RNAs in distill summaries#472

Open

tpall wants to merge 14 commits intoWrightonLabCSU:devfrom

Commits on Nov 20, 2025

Commits on Nov 21, 2025

Commits on Nov 25, 2025

Refactor distill script and configuration for improved clarity and functionality
tpall
committed

Commits on Nov 26, 2025

Refactor input and output path definitions for consistency in the SUMMARIZE process
tpall
committed
Fix conditional check for gene columns in genome summary export to prevent errors
tpall
committed
Refactor channel usage for consistency across workflows and improve readability
tpall
committed

Commits on Nov 27, 2025

Update SUMMARIZE module to use parameterized fasta column for grouping
tpall
committed

Commits on Nov 28, 2025

Commits on Dec 1, 2025

Updated combine_annotations.py to fix binwise summary. TODO: getting rid of FASTA_COLUMN environment variable
tpall
committed

Commits on Dec 18, 2025

Add QC:COLLECT_RNA to array pattern
tpall
authored