Potential fix for code scanning alert no. 1: Workflow does not contain permissions

[shachafl]

Potential fix for https://github.com/XiaoLabJHU/GRN_Inference/security/code-scanning/1

The best way to fix the problem is to explicitly set the required permissions using the permissions key in the workflow file. Since the workflow only requires read access to repository contents (for actions like checking out code), you should add a permissions: contents: read block. This can be done at the root of the workflow file (so it applies to all jobs), or under the build job if only that job exists. Here, as there is only one job, you can safely add it at the workflow root just after the name key for clarity and maintainability.

Edit:

• In .github/workflows/python-package.yml, after the name: Python package line (typically line 4), insert the following block:

  permissions:
    contents: read

No extra imports or changes are required.

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