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  1. bedops/bedops bedops/bedops Public

    🔬 BEDOPS: high-performance genomic feature operations

    C 337 61

  2. sample sample Public

    Performs memory-efficient reservoir sampling on very large input files delimited by newlines

    C 69 12

  3. slurm-proxy slurm-proxy Public

    This Flask/nginx/uWSGI/mongoDB application provides RESTful endpoints for submitting and monitoring jobs sent to a SLURM scheduler

    Python

  4. filter-regions filter-regions Public

    Filter genomic regions by score and proximity

    Python 1

  5. kmer-collapse kmer-collapse Public

    Collapse a set of redundant kmers to use IUPAC degenerate bases

    Python 3

  6. react-higlass-test react-higlass-test Public

    React hook app showing use of HiGlass library to render genomic data

    JavaScript