2.0.2 (for real, I hope): fix build error on Linux, update README.md

amplab · Jan 10, 2023 · 427ae19 · 427ae19
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commit 427ae19
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diff --git a/README.md b/README.md
@@ -14,8 +14,8 @@ need for several pipeline stages used by other aligners.
 ## Binaries
 
 The SNAP executable
-- [v2.0.1 For Linux](https://1drv.ms/u/s!AhuEg_0yZD86hcpYCkpLlDktZnVaow?e=YX60aF)
-- [v2.0.1 for Windows 10](https://1drv.ms/u/s!AhuEg_0yZD86hcpZQUgOEMrmA5qaLA?e=6FYxAv)
+- [v2.0.2 For Linux](https://1drv.ms/u/s!AhuEg_0yZD86hcpYCkpLlDktZnVaow?e=QRDhs4)
+- [v2.0.2 for Windows 10](https://1drv.ms/u/s!AhuEg_0yZD86hcpZQUgOEMrmA5qaLA?e=eUNeHZ)
 - [v2.0.0 for OSX](https://1drv.ms/u/s!AhuEg_0yZD86hcphrIjwoeTjdSvgoA?e=coSU85)
 
 The SNAPCommand tool

diff --git a/SNAPLib/IntersectingPairedEndAligner.cpp b/SNAPLib/IntersectingPairedEndAligner.cpp
@@ -3380,7 +3380,7 @@ IntersectingPairedEndAligner::scoreLocation(
         int TempScore, TempAgScore, agGenomeLocationOffset, agBasesClippedBefore, agBasesClippedAfter, agGenomeSpan;
         double agMatchProbability;
 
-        scoreLocationWithAffineGap(whichRead, direction, genomeLocation, seedOffset, scoreLimit, &TempScore, &agMatchProbability, &agGenomeLocationOffset, &agBasesClippedBefore, &agBasesClippedAfter, &TempAgScore, &agGenomeSpan, FALSE);
+        scoreLocationWithAffineGap(whichRead, direction, genomeLocation, seedOffset, scoreLimit, &TempScore, &agMatchProbability, &agGenomeLocationOffset, &agBasesClippedBefore, &agBasesClippedAfter, &TempAgScore, &agGenomeSpan, false);
     }
 }